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4 protocols using sc 135900

1

Immunoblotting of Mitochondrial Complexes

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SDS-PAGE and immunoblotting were performed as previously described (Maxfield et al., 2015 (link)). Antibodies used for immunoblotting were as follows: COX6B2 (1:1000, SAB1401983, MilliporeSigma), COX6B1 (1:1000, sc-393233, Santa Cruz Biotechnology), COXIV (1:5000, 4850, Cell Signaling Technology), β-Actin (1:10,000, sc-47778, Santa Cruz Biotechnology), V5 (1:5000, R960-25, Thermo Fisher Scientific), HIF-1α (1:1000, 610959, BD Biosciences), Cleaved Caspase-3 (1:500, 9661, Cell Signaling Technology), PARP (1:1000, 9532, Cell Signaling Technology), ERK (1:3000, sc-135900, Santa Cruz Biotechnology), NDUFA9 (1:1000, 459100, Thermo Fisher Scientific), UQCRC2 (1:1000, ab14745, Abcam). Proteins were quantitated by ImageJ software and normalized to CTRL groups. Incorporated COX6B1, COX6B2 or COXIV in individual complex (monomers (IV) and dimers (IV2) and supercomplexes (III2+IV and I+III2+IVn)) was normalized to total complexes (sum of IV, IV2, III2+IV and I+III2+IVn).
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2

ERK1/2 and β3-Tubulin Immunodetection

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The primary ERK1/2 antibody (Sc135900) and β3-tubulin (Sc80005) were obtained from Santa Cruz Biotechnology. The secondary goat anti mouse antibody (Invitrogen A10677) was obtained from ThermoFisher Scientific.
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3

Western Blot Protein Detection Protocol

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The experiments were performed as described previously [44 (link)]. The protein concentrations of cell and tissue lysates were measured using the Lowry assay, and 30 µg of total protein were separated by SDS-PAGE in 7.5, 10, or 12.5% gels depending on the molecular weight of the target. Primary antibodies against HMGB1 (1:1000; 66525-1-Ig, Proteintech, Rosemont, IL, USA), pDRP1(Ser616) (1:500; AP0849, ABclonal, MA, USA), pERK (1:500, #9101, Cell Signaling, Beverly, MA, USA), ERK (1:500; sc-135900, Santa Cruz Biotechnology, CA, USA), α-tubulin (1:2000; T5168, Sigma, Louis, MO, USA), Lamin A/C (1:1000, GTX101127, GeneTex, Irvine, CA, USA), and α-actin (1:2000, sc-137179, Santa Cruz Biotechnology) were used.
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4

Synthesis and Signaling Pathway Analysis

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DHP-3 was synthesized according to a previously described method (Yamaguchi et al., 1996) . LPS was purchased from Sigma-Aldrich (St. Louis, MO, USA). Antibodies against ERK (sc-135900), phospho-ERK (sc-7383), JNK (sc-7345), phospho-JNK (sc-6254), p38 (sc-81621), phospho-p38 (sc-166182), c-jun (sc-74543), cyclooxygenase-2 (COX-2) (sc-514489), and glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (sc-32233) were obtained from Santa Cruz Biotechnology (Dallas, TX, USA). Horseradish peroxidase (HRP)-conjugated goat anti-mouse immunoglobulin G antibody (A4416) was obtained from Sigma-Aldrich. All other reagents and chemicals used were of the highest grade of commercially available products.
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