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11 protocols using 3h acetate

1

Insect Fat Body Lipid Synthesis

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Three days after blood meal, adult females were carefully dissected, midgut and ovary were removed, and the ventral fat body was kept intact, associated with the abdominal cuticle, as previously described (Atella et al., 1992 (link)). For the determination of the de novo lipid synthesis activity, fat bodies were incubated in the presence of 3H-acetate (0.1 μCi/μL; PerkinElmer, Waltham, MA, United States) in culture medium 199 (Sigma-Aldrich; catalog number M0393), supplemented with 10 mM sodium acetate, as described (Saraiva et al., 2021 (link)). After incubation, fat bodies were gently separated from the cuticle, washed in PBS, individually homogenized in 200 µL of PBS, and subjected to lipid extraction (Bligh and Dyer, 1959 (link)). Total radioactivity incorporated in lipids was determined by liquid scintillation counting.
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2

Antibodies and Metabolic Inhibitor Assay

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The following antibodies for flow cytometry were from BD Biosciences: anti-CD4 (RM4-5), anti-CD8 (Ly-3), anti-IFN-γ (XMG1.2), and anti-Thy1.1 (OX-7). Anti-Foxp3 (FJK-16s) was from eBioscience. Class I OVA peptide and class II OVA peptide were obtained from AnaSpec. PCC peptide 81–104 was synthesized at Johns Hopkins University. Rabbit polyclonal antibody against mouse OCT1 (SLC22A1, ab55916) was obtained from Abcam. Rabbit polyclonal antibody to pS6 Ser 235/236 was obtained from Cell Signaling. Alexa Fluor 488-conjugated donkey anti-rabbit-IgG F(Ab′)2 was from Life Technologies. 3H-acetate was obtained from Perkin Elmer.
Rapamycin was purchased from LC laboratories and PP242 was from Chemdea. 2-DG was purchased from Carbosynth. Metformin and DON were purchased from Sigma-Aldrich. For all in vivo experiments, individual metabolic inhibitors were dissolved in PBS and administrated intraperitoneally.
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3

Acetate Incorporation in Hepatocytes

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Primary hepatocytes or AML12 hepatocytes were washed twice with warm
PBS and starved in serum-free DMEM overnight. Indicated concentrations of
insulin with or without Ism1 were added at the same time. After 24 h, a
mixture of 10 μM cold acetate and 2 μCi [3H]-Acetate
(#NET003H005MC, PerkinElmer) was added to each well and cells were incubated
for another 4 hr. Cells were washed with PBS twice and lysed using 0.1 N
hydrogen chloride. Lipids were extracted by 2:1 chloroform-methanol (v/v).
After centrifugation at 3000 xg for 10 min, the lower phase
was transferred to scintillation vials and radioactivity was measured by
liquid scintillation counting.
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4

Acetate Uptake Quantification

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100 µM 3H-acetate (Perkin Elmer, Waltham, MA) was added to cells two hours prior to harvest. Cells were washed twice in 1× PBS and were lysed in 5% triton X-100. Following protein determination, cell lysates were extracted with chloroform/methanol (2:1) followed by addition of magnesium chloride to a final concentration of 1.64 mM. Following vortexing and centrifugation, the organic phase was extracted three times and dried at 70 °C, resuspended in 100% ethanol, and counted in scintillation fluid.
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5

Acetate Incorporation into Cellular Lipids

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Cells were incubated overnight in Eagle's Minimum Essential Medium (EMEM) supplemented with 0.5% (w/v) fatty acid free bovine serum albumin. Then, cells were incubated for 4 h with fresh medium supplemented with 84 nM insulin and 20 μM acetate containing 20 μCi/ml [3H]acetate (Perkin Elmer, USA)58 (link). After the incubation, the cells were harvested, washed twice with ice cold phosphate buffered saline (PBS) (pH 7.4). Lipids were extracted and separated by thin layer chromatography. Lipid classes were visualized by exposure to iodine vapour, the corresponding bands were scraped, and the label incorporated into lipids was determined by scintillation counting and expressed relative to the cell protein.
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6

Quantification of Radiolabeled Acetoacetate

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BTEC cells were incubated 24 h with 1 µCi [3H]-acetate (3.6 mCi/mmol, PerkinElmer), then washed five times with PBS, and let grow for additional 48 h in fresh medium. After 72 h of radiolabeling, both cells and medium were collected. One aliquot of medium was used to generate the BTEC CM and incubated 24 h on LLC cells; the remaining part was used for the measurement of acetoacetate, as reported [21 (link)]. BTEC cells and LLC cells were collected by gentle scraping, re-suspended in PBS, and sonicated. A total of 100 µL cell lysates was used to measure the protein amount. A total of 300 µL of the lysates or of the medium were diluted 1:3 in the assay buffer (0.2 mM 3-(2-hydroxyphenyl) propionic acid, 10 mM p-Nitrobenzene diazonium fluoroborate solution, 0.4 M citrate buffer, pH 3.5, at 1:1:2 volume). The samples were incubated 5 min at 37 °C degree and resolved by an HPLC system equipped with a UV detector (SPD-20A) (Shimadzu, Kyoto, Japan), using the elution conditions described in [21 (link)]. The amount of [3H]-acetoacetate, an index of KBs synthesized by [3H]-acetate, was quantified according to calibration curves of serial dilutions of acetoacetate and expressed as µmol/mg cell proteins.
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7

Acetate Incorporation in WT and SSAO Adipocytes

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Differentiated WT and SSAO−/− 3T3-L1 cells cultured in a 24-well plate were labeled with the trace levels (1.0 μCi) of [3H]acetate (Perkin Elmer) for 1 h, 2.5 h, and 4 h. Lipids were extracted with chloroform/methanol using the Folch method [43 (link)], and radioactivity was counted by liquid scintillation. Equal amounts of cells seeded in parallel in a 24-well plate were lysed with 1x RiPA buffer for protein content analysis using BCA assay kit (Pierce). The protein amounts of each well between WT and SSAO−/− adipocytes were 151.2 ± 7.8 μg and 117.1 ± 2.1 μg (mean ± SD); the SD among wells is much smaller than the difference between WT and SSAO−/− adipocytes. Radioactivity of cell lysates was counted in Ecoscint scintillation mixture (National Diagnostics) using a Beckman LS-6000 liquid scintillation counter. Radioactivity in each sample was normalized to protein content.
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8

Lipid Synthesis in Insect Organs

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At the 16th day after a blood meal, insects were carefully dissected, midgut and ovary were removed, and abdominal fat body was kept intact, associated with the ventral cuticle [9 (link)]. The organs were rinsed in cold 0.15 M NaCl and incubated ex vivo in humid chambers in the presence of 0.1 μCi [3H]acetate (0.1 μCi/μL; Perkin-Elmer) and Medium 199 (Sigma) supplemented with sodium phosphate (10 mM, pH 7.4) and sodium acetate (10 mM) (20 μL final volume) for 1h at room temperature. After incubation, the organs were collected, washed and homogenized in 250 μL of 0.15 M NaCl. Lipids were extracted [35 (link)] and the radioactivity present in organic phase was determined by scintillation counting.
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9

Measuring Lipid Metabolism in PC-3 Cells

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Rates of lipid synthesis and fatty acid beta-oxidation were assessed in PC-3 cells 24 h after transfection with the indicated siRNA. The lipid assay was based on the method of Lin and collaborators [54 (link)] with some modifications. Briefly, 24 h after transfection, PC-3 cells were incubated with [3H]acetate (2 μCi/ml; Perkin Elmer; used as a metabolic precursor of lipids) during 24 h Lipids were extracted using the chloroform–methanol method, and lipid radioactivity was measured by liquid scintillation (Lipoluma; Lumac). Triglycerides and phosphatidic acid content were measured in cells 48 h after transfection with the indicated siRNA. Lipids were extracted using the chloroform-methanol method. Triglycerides were measured by using a a colorimetric assay (Sigma, TR0100) and the phosphatidic acid content by using a fluorometric assay kit (Cayman chemical, 700240) following the instructions of the manufacturer.
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10

Cellular Metabolism Assay Protocol

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ATP, NAD, NADPH, acetyl-CoA, malonyl-CoA, propidium iodide, Hoechst 33258, RNase A, and Cibacron blue Sepharose were obtained from Sigma-Aldrich. [3H]Acetate, 3-D-[3H]glucose, and 2-[14C]malonyl-CoA were purchased from PerkinElmer. Fluorescein-5-maleimide, Alexa Fluor 488, annexin V, and Sytox red were purchased from Invitrogen. Humulin R insulin was purchased from Lilly. Cells were obtained from the American Type Culture Collection.
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