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Anti nk1

Manufactured by Thermo Fisher Scientific
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Anti-NK1.1 is a laboratory reagent used for the detection and identification of natural killer (NK) cells in mice. It is a monoclonal antibody that specifically binds to the NK1.1 antigen, a cell surface marker expressed on murine NK cells. This product can be used in various immunological techniques, such as flow cytometry, to analyze the presence and characteristics of NK cells in research samples.

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39 protocols using anti nk1

1

Liver Leukocyte Isolation and Flow Cytometry

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Leukocytes were isolated from the liver in the way as described previously40 (link). For flow cytometry, cells were stained for surface antigens with anti-NK1.1, anti-CD3, anti-CD4, anti-CD8α, anti-CD19, anti-CD44, anti-CD62L (BioLegend, San Diego, CA), or/and for intracellular antigens with anti-IFN-γ, anti-IL-4, anti-IL-17A, anti-TNF-α and anti-IL-10 (BioLegend). IgG isotype controls (Biolegend) were used in parallel. To detect Treg cells, cells were stained with anti-NK1.1, anti-CD3, anti-CD4, anti-CD25 at 4 °C for 30 minutes; and incubated with anti-mouse Foxp3 antibodies according to the manufacturer’s instructions (eBioscience). Methods were the sameas those described previously9 (link).
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2

Lineage-Negative Bone Marrow Cell Isolation

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Lin cells were isolated from total BM by labeling of single cell suspensions with a lineage-specific purified rat-anti-mouse-IgG antibody cocktail (anti-CD4, anti-CD8, anti-CD19, anti-CD11b, anti-Gr-1, Ter-119, and anti-NK1.1, all from eBioscience) followed by incubation with sheep-anti-rat-IgG magnetic beads (Dynal; Invitrogen) and magnetic bead depletion of mature lineages. Lin BM cells were used directly for injection in some of the experiments or for further cell sorting. Donor mice used for isolation of lin cells were always 7–10 wk old.
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3

Temporal Dynamics of Immune Subsets

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10 week old male B6.2 mice were treated daily for 0 to 10 days with 3AC as described above. On each day (0 to 10 inclusively), 5 mice were sacrificed, splenocytes were harvested, RBCs were lysed using 1× RBC Lysis buffer (eBioscience), counted and then stained with anti-NK1.1 and anti-Mac1 and anti-Gr1, or with anti-CD3ε, anti-CD4 then fixed and stained with anti-FoxP3 as per manufacturer’s recommendation (eBioscience). Cells were analyzed by flow cytometry as described below. Frequency and absolute numbers of live NK cells and MDSCs were compared to those observed in the splenocytes from the 5 uninjected mice harvested on day 0. Live CD4+FoxP3+ cells were expressed as frequency of CD3ε+ Tcells and compared to those on day 0.
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4

Murine Bone Marrow Cell Isolation and Immunophenotyping

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Bone marrow was isolated from tibia and femur of mice and erythrocytes were lysed. To sort pre-progenitor cells staining for linage markers anti-CD3e (Cat # 45-0031-80, eBioscience, 1:50), anti-GR1 (Cat # 108428, BioLegend, 1:400), anti-Mac-1 (Cat # 101228, BioLegend, 1:400), anti-CD4 (Cat # 101228, BioLegend, 1:200), anti-CD8a (Cat # 100734, BioLegend, 1:100), anti-TCRb (Cat # 109228, BioLegend, 1:100), anti-NK1.1 (Cat # 45-5941-82, eBioscience, 1:100), anti-B220 (Cat # 103236, BioLegend, 1:100) and anti-CD19 (Cat # 115534, BioLegend, 1:200) was performed. Additionally anti-CD16/32 (Cat # 101305, BioLegend, 1:200), anti-CD41 (Cat # 133906, BioLegend, 1:100), anti-Sca-1 (Cat # 108114, BioLegend, 1:200), anti-c-kit (Cat # 47-1171-82, Invitrogen, 1:50), anti-CD105 (Cat # 120412, BioLegend, 1:50) and anti-CD150 (Cat # 115910, BioLegend, 1:400) were stained to further classify cells. To sort immature granulocytes, mature granulocytes and monocytes anti-Ly6G/Ly6C (Cat # 17-5931-82, Invitrogen, 1:100), anti-CD11b (Cat # 25-0112-82, eBioscience, 1:100) and anti-CD115 (Cat # 11-1031-85, eBioscience, 1:100) were used. Gating strategy was performed as shown in Supplementary Fig 5.
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5

Comprehensive Flow Cytometry Analysis of Immune Cells

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Hepatic and adipose immune cells were pre‐incubated with anti‐mouse CD16/32 Fc blocker (BD Pharmingen, USA), followed by staining with the Live/Dead marker anti‐FVD‐APC‐Cy7 (all supplied by eBioscience, San Diego, CA, USA). The fluorochrome‐conjugated antibodies used in this study were anti‐CD45, anti‐CD3, anti‐NK1.1, anti‐CD4, anti‐CD8, anti‐CD44, anti‐CD62L, anti‐CD11b, anti‐F4/80, anti‐Ly6C, anti‐Ly6C, and anti‐Siglec‐F (all supplied by eBioscience, San Diego, CA, USA). Liver mononuclear cells were stimulated with phorbol‐myristate acetate/ionomycin/brefeldin A/monensin for 5 hr in vitro. The cells were fixed and permeabilized using a Fixation/Permeabilization Buffer kit (eBioscience, San Diego, CA, USA). The permeabilized cells were washed with FACS buffer and resuspended in 1% formaldehyde and stained for intracellular cytokines with anti‐IFN‐γ‐PE‐Cy7, anti‐TNF‐α‐APC, and anti‐IL‐17A‐APC fluorochrome‐conjugated antibodies. Stained cells were analyzed using a BD LSRFortessa flow cytometer (BD Biosciences, San Jose, CA, USA), and data were analyzed using FlowJo software (FlowJo, LLC, Ashland, OR, USA).
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6

Purification of Kupffer Cells and Inflammatory Monocytes

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To purify KCs, Ly6Chi and Ly6Clow IMs, liver NPCs were incubated with normal rat serum (Sigma) and anti-mouse FcγRII/III (Becton Dickinson, Franklin Lakes, NJ, USA) to minimize nonspecific antibody binding. Subsequently, the cells were stained with anti-CD45, anti-Ly6C, anti-Ly6G, anti-CD19, anti-SiglecF (Becton Dickinson) and anti-F4/80, anti-CD11b, anti-NK1.1 and anti-CD3 (eBioscience, San Diego, CA, USA), and sorted using a BD FACSAria II Cell Sorter (BD Bioscience, San Jose, CA, USA).
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7

Whole Blood and Spleen Cell Isolation and Staining

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Peripheral blood (50 μL) was collected and placed in 4 ml of mouse RBC lysis buffer (eBioscience). Splenic single-cell suspensions were prepared by mechanical dissociation of the spleen, followed by filtration, and lysis of the RBCs. Cells were stained with anti-mouse CD4, CD8α, CD19, CD3e, NK1.1, λσ-T, FoxP3, and granzyme B antibodies (eBiosciences). For granzyme B measurements, T cell activation was performed before Ab staining. Splenic single-cell suspensions were prepared and cultured in RPMI 1640 (containing 10% FBS) plus IL-2. T cells were activated for 7 days using a Dynabead Mouse T Activator CD3/CD28 kit. Antibodies used for flow cytometry in this study (anti-CD11c, anti-CD11b, anti-CD19, anti-NK1.1, anti-CD3, and anti-MHCII) were from eBioscience, and anti-TNF-α was from Becton-Dickinson. Single-cell suspensions were prepared with a Neural Tissue Dissociation Kit from Miltenyi Biotec. For CD11b and TNF-α analysis, cells were treated with Cell Stimulation Cocktail and a protein transport inhibitor (eBioscience) overnight, stained for surface CD11b, and fixed and permeabilized for TNF-α detection (using flow cytometry). TMEM 119 was used to stain microglia via ex vivo flow cytometry and by immunohistochemistry (34 (link)).
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8

Isolation and Characterization of Hepatic Immune Cells

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Carbon tetrachloride, corn oil, percoll, collagenase type I, DNase I and pronase were purchased from Sigma Aldrich. The anti-desmin and anti-αSMA antibodies were purchased from Abcam. For immunohistochemistry, the anti-αSMA antibody was purchased from DAKO. The anti-Rae1 and anti- NKG2D antibodies were purchased from R&D systems. NKT, NK, CD3, CD4 and CD8 T cells expression from liver MNCs and splenocytes were identified by using anti-NK1.1, anti-CD3, anti-CD4, anti-CD8, anti-NKG2D, and anti-CD8 antibodies using flow cytometry purchased from Ebiosciences. anti-CD3, anti-CD4 and anti-CD8 antibodies were purchased from Abdserotec for immunohistochemistry application.
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9

Comprehensive Immunostaining Panel for Immune Cell Analysis

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Anti-Nono (Cat# 11058-1-AP and 66361-1-Ig) was from Proteintech. Anti-Elk3 (Cat# NBP1-83960) was from Novus Biologicals. Anti-Tmem241 (Cat# 203644-T32) was from Sinobiological. Anti-Lineage cocktail (Cat# 88-7772-72), Anti-CD127 (A7R34), anti-Sca-1 (D7), anti-Flt3 (A2F10), anti-α4β7 (DATK32), anti-Id2 (ILCID2), anti-PLZF (Mags.21F7), anti-Eomes (Dan11mag), anti-NKp46 (29A1.4), anti-NK1.1 (PK136), anti-CD45 (30-F11), anti-CD25 (PC61.5), anti-Gata3 (TWAJ), anti-RORγt (AFKJS-9), anti-Bcl11b (1F8H9), anti-CD3 (17A2), anti-CD19 (1D3), anti-KLRG1 (2F1), anti-CD90 (HIS51), anti-IL-22 (IL22JOP), anti-Ki67 (SolA15), anti-CD45.2 (104), anti-BrdU (BU20A), anti-PD-1 (J43) and anti-CD45.1 (A20) were purchased from eBiosciences (San Diego, USA). Anti-c-Kit (2B8), anti-CD150 (TC15-12F12.2), anti-CD48 (HM48-1), and anti-CD49a (HMα1) were purchased from Biolegend (California, USA). Anti-β-actin (Cat# RM2001) was purchased from Beijing Ray Antibody Biotech. Paraformaldehyde (PFA) and 4’,6-diamidino-2-phenylindole (DAPI) were from Sigma. IL-22 ELISA kit was purchased from Neobioscience.
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10

Flow Cytometry Immunophenotyping Protocol

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Cells were pre-incubated with anti-CD16/CD32 Fc blocking antibody (eBioscience) to block non-specific staining. Antibody cocktails were added and cells incubated at 4°C for 30 min. Intracellular staining for FoxP3 was performed by pretreating with a permeabilization kit from eBioscience. The following fluorochrome-conjugated anti-mouse antibodies were used to stain the cells: anti-CD3, anti-CD4, anti-CD8a, anti-GR1, anti-CD11b, anti-CD11c, anti-CD25, anti-NK1.1, anti-CD19, and anti-FoxP3, all purchased from eBioscience. Phycoerythrin conjugated R9F-dextramer-PE was obtained from Immudex. A FACSCalibur (BD Biosciences) was used for acquisition of flow cytometry data and analysis was performed using WinList 7.0 (Verity Software, Topsham, ME, USA).
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