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293t cell line

Manufactured by Takara Bio
Sourced in United States

The 293T cell line is a human embryonic kidney cell line that is commonly used in cell biology research. It is characterized by its ability to readily express exogenous proteins and is often employed for the production of recombinant proteins and viral vectors. The 293T cell line is a widely used tool in various research applications.

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10 protocols using 293t cell line

1

Lentivirus and Retrovirus Production

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Lentiviruses and retroviruses were generated in the 293T cell line (Clontech) transfected with the appropriate expression vector along with packaging plasmids using PolyJet In Vitro DNA Transfection Reagent (catalog no. SL100688 SignaGen® Laboratories) according to the manufacturer’s instructions. Virus-containing media from 293T cells were collected 48 h and 72 h later, syringe-filtered through a 0.45 μm filter, and transferred to target cells in the presence of polybrene (10 μg/ml).
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2

Melanoma Cell Lines from Patient-Derived Xenografts

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Melanoma cell lines MB 2141, 3443, 3429 (derived in 2016 by our laboratory) and MB 1692, 1374 (derived in 2015 by our laboratory) were generated from fresh PDX tumor tissues using a human tumor dissociation kit (Miltenyi Biotec). All experiments in this study used MB cell lines within 20 passages from initial derivation. The H3122 cell line (obtained in 2008 from Dr. Paul A. Bunn, University of Colorado) has been previously described (22 (link)). The NIH3T3 cell line was purchased in 2016 from the American Type Culture Collection (ATCC) and the 293T cell line was purchased in 2016 from Clontech. Cells were cultured in DMEM (NIH3T3 and 293T cells) or RPMI (melanoma and NSCLC cells) with 10% FBS and 1% penicillin-streptomycin, under 5% CO2. All cell lines were STR profiled and matched >80%, except for NIH3T3 and 293T cell lines which were used within 15 passages of receiving from the company. Cell lines tested negative for mycoplasma (August 2017) using a luminescence based assay (Lonza).
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3

Malignant Melanoma Cell Line Characterization

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The human malignant melanoma cell line A375 was obtained from the American Type Culture Collection. The A375 cells expressing recombinant plasmid SUPER/CD147 short hairpin RNA (shRNA) (A375 ShCD147) or recombinant plasmid SUPER/RING1 short hairpin RNA (shRNA) (A375 ShRING1) or empty vector (A375 EV). These cells were maintained in RPMI 1640 medium (Thermo Scientific, MA, USA) supplemented with 10% FBS (Thermo Scientific, MA, USA).The 293T cell line was purchased from Clontech (Clontech, CA, USA) and grown in Dulbecco’s modified Eagle’s medium(DMEM) supplemented with 10% FBS. All cell lines were maintained in a humidified 5% CO2 atmosphere at 37°C.
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4

Cell Line Cultivation and Maintenance

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The human malignant melanoma cell lines Sk-Mel-28 and A375, the mouse malignant melanoma cell line B16F10, the human melanocyte cell line PIG1, the human non-small cell lung cancer cell line A549 and the mouse Lewis lung cancer cell line LLC were purchased from American Type Culture Collection (USA). the 293T cell line was purchased from Clontech (Mountain View, USA). the PIG1 cell line was cultured in Opti-MEM I Reduced Serum Medium (Gibco, USA); the Sk-Mel-28, A375, and LLC cell lines were cultured in Dulbecco’s modified Eagle’s medium (Gibco, USA); and the B16F10 and A549 cell lines were cultured in Roswell Park Memorial Institute (RPMI)-1640 medium (Gibco, USA) supplemented with 10% fetal bovine serum (Gibco, USA) and 1% penicillin–streptomycin solution (Biological Industries, Israel) at 37°C and 5% CO2.
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5

Cell Line Cultivation and Maintenance

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The human malignant melanoma cell lines Sk-Mel-28 and A375, the mouse malignant melanoma cell line B16F10, the human melanocyte cell line PIG1, the human non-small cell lung cancer cell line A549 and the mouse Lewis lung cancer cell line LLC were purchased from American Type Culture Collection (USA). the 293T cell line was purchased from Clontech (Mountain View, USA). the PIG1 cell line was cultured in Opti-MEM I Reduced Serum Medium (Gibco, USA); the Sk-Mel-28, A375, and LLC cell lines were cultured in Dulbecco’s modified Eagle’s medium (Gibco, USA); and the B16F10 and A549 cell lines were cultured in Roswell Park Memorial Institute (RPMI)-1640 medium (Gibco, USA) supplemented with 10% fetal bovine serum (Gibco, USA) and 1% penicillin–streptomycin solution (Biological Industries, Israel) at 37°C and 5% CO2.
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6

Cell Line Authentication Protocol

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PANC-1 and MIA-Pa-Ca-2 cell lines were obtained from ATCC. The 293T cell line was obtained from Clontech and all cell lines were grown in DMEM supplemented with 10% FBS. All cell lines were tested every 6 months by STR analysis and matched 100% to the ATCC database.
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7

Cell Line Authentication Protocol

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PANC-1 and MIA-Pa-Ca-2 cell lines were obtained from ATCC. The 293T cell line was obtained from Clontech and all cell lines were grown in DMEM supplemented with 10% FBS. All cell lines were tested every 6 months by STR analysis and matched 100% to the ATCC database.
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8

Generating Stable Cell Lines with Lentivirus

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Fourth-generation lentivirus packing systems (Lenti-X, Takara-Clontech) were used to generate stable copGFP-expressing and mCherry-expressing cell lines. Briefly, puromycin-resistant – copGFP (pLenti-CMV-GFP-Puro) and blasticidin-resistant mCherry (pLV-Bsd-CMV-mCherry) vectors were obtained and amplified in stable competent EColi (New England Biolabs) by employing standard molecular biology protocol with 100 µg/mL Ampicillin selection, purified for lentivirus packing using commercial plasmid prep kit (Takara-Clontech). For generating lentivirus, Lenti-X reagent was mixed with 6 µg of lentivirus plasmid and transfected in 293T cell line (Takara-Clontech) for packing. Harvested lentivirus was used to transduce target cell lines using polybrene by following established protocol. Hepa1-6, HepG2, and Hep3B cell lines were transduced with copGFP lentivirus, and cell lines were selected with 3 µg/mL puromycin (Sigma-Aldrich) and expanded after confirmation by fluorescence microscope for copGFP expression (Supplementary Figure 4). Hepa1-6 cell line was transduced with mCherry lentivirus, and selected with 10 µg/mL blasticidin (Sigma-Aldrich).
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9

Lentiviral Knockdown of KDM1A

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KDM1A was downregulated using lentivirus made with plasmids GIPZ Control, KDM1A sh1 clone V3LHS_361041 and KDM1A sh6 clone V2LHS_34926 (Horizon Discovery, Waterbeach, UK). Viruses were prepared using the 293T cell line (Clontech, USA) with packaging plasmids (ΔR) and G-protein vesicular stomatitis virus (VSVG) using JetPrime transfection reagent (PolyPlus transfection, USA) according to the manufacturer’s instructions. For transduction cells were plated in 60- or 100-mm tissue culture dishes and allowed to achieve 60% confluence before adding viral supernatant in the presence of 8 μg/ml polybrene for 24 hours (Sigma, St. Louis, MO). Cells were selected by treatment with puromycin (1ug/ml for FaDu cells and 2ug/ml for HaCaT) for 5 days.
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10

Cell Line Characterization and Treatment

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Human prostatic carcinoma cell line PC3 was obtained from the American Type Culture Collection (Manassas, VA, USA). Human hepatocellular carcinoma cell line HuH7 and human uterine cervical carcinoma cell line HeLa were supplied by Cell Resource Center for Biomedical Research, Institute of Development, Aging and Cancer, Tohoku University (Sendai, Japan). The 293T cell line, which is a highly transfectable derivative of human embryonic kidney cell line 293, was obtained from Clontech Laboratories, Inc. (Takara Bio USA, Inc., Mountain View, CA, USA). PC3, HuH7 and HeLa cells were maintained in RPMI‐1640 medium (Nissui Pharmaceutical, Tokyo, Japan) supplemented with 10% fetal bovine serum (Gibco, Thermo Fisher Scientific, Waltham, MA, USA), 2 mm l‐glutamine, 2.4 g·L−1 NaHCO3, 100 units·mL−1 penicillin, and 100 μg·mL−1 streptomycin. The 293T cells were maintained in Dulbecco's modified Eagle's medium (Gibco), 10% fetal bovine serum, 100 units·mL−1 penicillin, and 100 μg·mL−1 streptomycin. Cells were incubated at 37 °C under a humidified atmosphere of 5% CO2. Pifithrin‐μ (PFT‐μ), VER‐155008, and JG98 were purchased from Tocris Bioscience (Bio‐Techne Corp., Minneapolis, MN, USA), Cayman Chemical Company (Ann Arbor, MI, USA), and Selleck Chemicals (Houston, TX, USA), respectively. These compounds were dissolved in dimethylsulfoxide at 10–100 mm as a stock solution.
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