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19 protocols using recombinant human tgf β1

1

Fibrotic Response Induction in Lung Fibroblasts

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Normal human lung fibroblasts (Lonza) and Primary Human IPF Lung Parenchymal Fibroblasts (Donor2) (BioIVT, #PCR-70-0214) were incubated at 37 °C and 5% CO2. To induce fibrotic response in primary cells, a final concentration of 5 ng/ml of recombinant human TGFβ1 (BioLegend, #580702) was added to the culture media and treated for 24 ~ 48 h. Anti-TGFβ neutralizing antibody (1D11) and the isotype control mouse IgG1 were from BioXcell. SB-525334 and bleomycin were from Sigma. MK-0429 was synthesized by Merck & Co., Inc., Kenilworth, NJ, USA. CHOK1-integrin stable lines were cultured in DMEM/F12, Glutamax (Gibco #10565018), 10% FBS (Gibco 310091148), 1 × Pen/Strep (Gibco 315140-148), and 6 ug/mL Puromycin (Gibco #A1113803).
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2

Th17 Cell Differentiation Pathway

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Antibodies to mouse CD3 (clone 145-2C11), CD28 (clone 37.51), CD45 (clone 30-F11), CD4
(clone L3T4), CD8 (clone 53-6.7), IL-17A (clone eBio17B7) and IL-22 (clone
IL22J0P) were from eBioscience or Biolegend. Mouse CD4 microbeads were from
Miltenyi Biotec. Recombinant human TGF-β1 and recombinant mouse IL-6 and
IL-23 were purchased from Biolegend. PGE2, 17-phenyl trinor
PGE2 (EP1/3 agonist), Butaprost (EP2 agonist), CAY10598 or
L-902,688 (EP4 agonist), PF-04418948 (EP2 antagonist), and L-161,982 (EP4
antagonist) were from Cayman. Db-cAMP, PKA Inhibitor 14-22 (PKI), CH-223191,
oxalozone, indomethacin, phorbol myristate acetate (PMA), Ionomycin were from
Sigma or Calbiochem.
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3

Cytokine Reconstitution for Cell Culture

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Recombinant human BMP9 (BioLegend 553104), recombinant human
TGFβ1 (BioLegend 580702), recombinant human TNFα (Peprotech
300–01A), and recombinant human M-CSF (R&D 216-MC-025) were
reconstituted in 0.1% BSA/PBS.
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4

Inhibition of TGF-β Signaling Pathways

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Before stimulation, cells were deprived of serum for 24 h and thereafter stimulated with 1 ng/ml recombinant human TGFβ1 (Biolegend, the Netherlands) for 2 or 24 h. In experiments where inhibitors were used, DMSO was used as vehicle control. To block TAK1 activity, we used (5Z)-7-Oxozeaenol [17 (link)] (Tocris Bioscience) in a concentration of 0.5 μM. To inhibit ALK5 kinase, we used SB-505124 [15 (link)] (Sigma Aldrich) in a concentration of 5 μM. For inhibition of ALK1 kinase, LDN-193189 [14 (link)] (Axon Medchem) was used in a concentration of 0.05 μM. This concentration of LDN-193189 is well above its reported half maximal inhibitory concentration (IC50), 0.8 nM for ALK1, but far below its IC50 for ALK5 of 350 nM [16 (link), 23 (link)]. Cells were pre-incubated with the inhibitors for 1 h prior to addition of TGF-β1. Either 2 or 24 h after addition TGF-β1, medium was removed and TRI-reagent was added for RNA isolation.
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5

Suppression of Bystander T Cell Proliferation

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For analysis of suppression of proliferation of bystander T cells by test T cells, 5 × 104 SCFA-pulsed DCs were cocultured with 5 × 105 naive CD4+ T cells for 6 days. These T cells (test T cells) were harvested, washed, counted, stained with the cell cycle tracking dye 1 µM Cell Trace Violet dye (Thermo Fisher Scientific) and irradiated (3,000 RAD) to prevent expansion. Bystander target T cells (responder T cells), which were allogeneic memory T cells from the same donor as the test T cells, were labeled with 0.5 µM cell tracking dye 5,6-carboxy fluorescein diacetate succinimidyl ester (CFSE). Subsequently, 5 × 104 test T cells, 2.5 × 104 responder T cells, and 1 × 103 LPS-stimulated DCs were cocultured for 6 days. Proliferation was determined by flow cytometry, by co-staining with CD4 PE-Cy7 (clone SK3) and CD25 APC (clone 2 A3) (both BD Bioscience). To some cultures, where indicated, 10 µg/mL anti-IL-10 antibody (BioLegend), 10 µM ALK5 (Sigma-Aldrich), 10 µM DEAB, 20 ng/mL recombinant human TGF-β1 (BioLegend) (kind gift from Dr. L. Boon), or control antibody IgG1 (BioLegend) was added during the DC-T cell coculture or during the test-responder T cell coculture.
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6

Sensitization and Stimulation of Mast Cells

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Protocols involving human tissues were approved by the human studies Internal Review Board at the University of South Carolina. Surgical skin samples were obtained from the Cooperative Human Tissue Network of the National Cancer Institute. Skin MCs were isolated and cultured as described previously (21 (link)) and were used after 6–12 weeks. Mast cell purity was determined to be 100% by toluidine blue staining. When applicable, human mast cells were sensitized 24 hour prior to the antigen (Ag) stimulation with the addition of 1 μg/ml DNP-specific mouse IgE (a gift from Dr. Daniel Conrad, VCU), washed to remove excess unbound IgE, and stimulated with 50 ng/ml DNP-HSA (Ag), for 16 hours. Where indicated, recombinant human TGFβ1 (10 ng/ml, BioLegend) was applied for 3 days prior to Ag stimulation and recombinant human IL-33 (100 ng/ml, BioLegend) was added at the same time as Ag. All supernatants were collected after 16 hours of stimulation. Each experimental condition was performed in triplicate determinations from 5 different donors.
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7

Cytokine-Induced Cellular Responses

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PTX (cat: P1784) was obtained from Sigma-Aldrich (St. Louis, MO, USA). Recombinant Human TGF-β1 (cat: 580704) and recombinant Human TNF-α (570104) were obtained from Biolegend (San Diego, CA, USA). All stock solutions were diluted in culture media prior to use.
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8

Induction of Murine Th17 Cells In Vitro

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Tissue culture-treated plates were first coated with 5 μg/mL anti-mouse CD3ε antibody (100314, BioLegend, San Diego, CA), at 37°C for 4 hr. Lymphocytes were harvested from mouse spleen through a 70 μm cell strainer as described above and resuspended in PBS. Then, these CD4+ T-cells were negatively isolated from splenocytes as described above. The isolated CD4+ T cells were resuspended into culture media (RPMI 1640 (11875093, ThermoFisher Scientific Inc., Waltham, MA) + 10% FBS (26140079, ThermoFisher Scientific Inc., Waltham, MA) + 10 mM HEPES + 1X Antibiotic-Antimycotic (15240062, ThermoFisher Scientific Inc., Waltham, MA) supplemented with 5 μg/ml anti-mouse CD28 antibody (102112, BioLegend, San Diego, CA), 50 ng/ml recombinant mouse IL-6 (575704, BioLegend, San Diego, CA), 5 ng/ml recombinant human TGF-β1 (580702, BioLegend, San Diego, CA), 10 ng/mL recombinant mouse IL-23 (589002, BioLegend, San Diego, CA), 10 μg/mL anti-mouse IL-4 antibody (504108, BioLegend, San Diego, CA), and 10 μg/mL anti-mouse IFN-γ antibody (505812, BioLegend, San Diego, CA) to a cell density of 0.8 - 1 x 106/mL and incubated at 37°C with 5% CO2 for 2 days. Fresh medium with the same supplements was added into each well to increase the initial volume by 50% and incubation was continued for another 2 days.
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9

Hepatogenic Mesenchymal Cell Transfection

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LX-2 cells are hepatogenic mesenchymal human cells and were obtained from Xiang Ya Central Laboratory (Xiangya Medical College, China). The cells were transfected using jetPRIME reagent (PolyPlus Transfection SA, NY, United States) and treated with calcitriol. Recombinant human TGFβ1 (BioLegend, CA, United States) was administered to the cell cultivation medium at 2.5 ng/mL or 5.0 ng/mL for 24 h[18 (link),25 (link)]. All procedures were executed in accordance with the manufacturer’s guidelines.
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10

Neutrophil Differentiation and Activation

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HL-60 cells (Sigma-Aldrich, St. Louis, MO) were cultured and differentiated as described in the Online Supplement. Primary human neutrophils were isolated from healthy donor blood using the EasySep Direct Human Neutrophil Isolation Kit (Stemcell Technologies, Vancouver, BC) per the manufacturer’s instructions. Neutrophil purity was confirmed with Kwik-Diff (Thermo Shandon) staining. Cells were cultured at 37°C, 5% CO2 in Roswell Park Memorial Institute-1640 media with L-glutamine supplemented with 10% heat-inactivated Fetal Calf Serum, 1% penicillin/streptomycin, 50 mg/ml gentamicin and 5ng/ml recombinant human TGF-β1 (BioLegend) for 16 hours. Recombinant human granulocyte-macrophage colony-stimulating factor (GM-CSF) (Sigma) was added at 100ng/ml as indicated for 30 minutes prior to harvesting.
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