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4 protocols using ab47563

1

Immunostaining Protocols for Neurological Tissues

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Immunostaining was carried out as described by Montie et al., 2009 following 20 min fixation in 4% paraformaldehyde. Spinal cord tissue was embedded in OCT and cryosectioned (7μm) prior to fixation. All animal procedures were performed following the guidelines of the Office of Laboratory Animal Welfare and with the approval of the Thomas Jefferson University Institutional Animal Care and Use Committee.
Antibodies used include: AR (H280, Santa Cruz Biotechnology), AR (AR-318-CE, Leica Biosystems), AR pS650 (ab47563, Abcam), RanGAP1 (H180, Santa Cruz Biotechnology), Ran (610340, BD Transduction Laboratories), Lamin B1 (ab16048, Abcam), HDAC6 (D21B10, Cell Signaling Technology), HSP70 (SMC-100, StressMarq), neurofilament-heavy chain (SMI32; 801701 Sternberger Monoclonals), and 3B5H10 (a kind gift from Dr. Steve Finkbeiner, Gladstone Institute of Neurological Disease and UCSF). Immunostained cells were visualized using a Leica DMR Fluorescence microscope (Leica Microsystems GmbH, Wetzlar, Germany) and imaged using iVision Mac® or ProgRes® software.
In PC12 cells, the percentage of inclusions was determined by counting at least 300 cells in triplicate wells. Experiments were repeated at least three times.
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2

Western Blot Analysis of Protein Extracts

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Protein extracts were prepared by lysing cells in Triton-DOC lysis buffer (1% sodium deoxycholate, 0.5% Triton X-100 in PBS with protease inhibitors). All lysates were sonicated at least three times for 10 s using a Branson cup sonifier. Protein concentration was determined by DC protein assay (Bio-Rad). Lysates were electrophoresed by SDS-PAGE and transferred to 0.45 μm PVDF membrane (Immobilon-P). Blots were incubated with primary antibodies diluted in 5% nonfat milk in TBST (TRIS-buffered saline, 0.1% Tween-20) for 60 min at room temperature or overnight at 4 °C and with HRP-conjugated secondary antibodies (mouse: AP308P, rabbit: AP307B; Millipore) for 60 min at room temperature. Detection was performed using ECL substrate (Thermo Fisher) with analysis on a ChemiDoc MP (Bio-Rad).
Antibodies used include: AR (H280, Santa Cruz Biotechnology), AR pS650 (ab47563, Abcam), α-tubulin (21445, Cell Signaling Technology), β-catenin (8480 T, Cell Signaling Technology), Lamin B1 (ab16048, Abcam), p62 (ab56416, Abcam), and GAPDH (10R-G109A, Fitzgerald).
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Comprehensive Protein Isolation and Analysis

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Protein isolation was performed using working RIPA buffer (120mM NaCl, 50 mM pH 8.0 Tris, 0.5% NP-40, 1 mM EGTA) containing protease and phosphatase inhibitors (100 ug/mL PMSF, 1 mM NaOrVa, 50 ug/mL aprotinin, 50ug/mL leupeptin). Protein concentration was determined using a Bio-Rad protein concentration assay dye and absorbance read at 595 nm on a spectrophotometer (SpectraMax ID3, Molecular Devices). 20μg total protein in βmercaptoethanol-containing loading buffer was added per well onto 4–12% SDS-PAGE gels (NuPAGE) and transferred to PVDF (Bio-Rad) or nitrocellulose (Amersham) membrane. nitrocellulose membranes were stained for total protein using Ponceau S (Boston BioProducts). Membranes were blocked with 10% BSA or milk-fat in TBST for 1 hour at room temperature. Primary antibodies from Abcam for AR (ab74272), AR-V7 (ab198394), phosphorylated AR-Ser650 (ab47563), ACAT1 (ab168342), MAP3K11 (ab51068), PSDM12 (ab229930), and GAPDH (AM4300) were used at recommended concentrations in 2.5% milk-fat or 2.5% bovine serum albumin overnight at 4°C. Anti-rabbit and anti-mouse secondary antibodies (GE Healthcare) were used in 2.5% milk-fat for one hour at room temperature. Membranes were imaged via chemiluminescence reagents (Super Signal™ West Pico Plus, Thermo Fisher) on a digital imager (ChemiDoc™ Touch, Bio-Rad).
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4

Visualizing Androgen Receptor Activation

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PC12 cells were plated on poly-D-lysine coated glass coverslips and treated with 500 ng/mL doxycycline and 10 nM DHT for 24 hrs. Duolink® PLA Fluorescence protocol was performed per manufacturer’s instructions (DUO92008, Sigma-Aldrich) with primary antibodies against total AR (AR-318-CE, Leica Biosystems) and AR pS650 (ab47563, Abcam). Images were acquired with the same exposure time.
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