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Gelred nucleic acid gel stain 10 000x

Manufactured by Biotium
Sourced in United States

GelRed® nucleic acid gel stain 10,000X is a highly sensitive and stable fluorescent dye used for the detection of DNA and RNA in agarose and polyacrylamide gels. It can be used as an alternative to ethidium bromide for nucleic acid staining.

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2 protocols using gelred nucleic acid gel stain 10 000x

1

Extraction and Purification of Nucleic Acids

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Silica gel blue (Profinas S.A., Colombia)

Cetyltrimethylammonium bromide (CTAB; Merck)

Tris-hydrochloride (Tris–HCl; Sigma)

Disodium ethylenediamine (EDTA; Sigma)

Polyvinylpyrrolidone (PVP-10; Sigma)

2-Mercaptoethanol (βME; Merck-Millipore)

DNase I (Promega)

GelRed® nucleic acid gel stain 10,000X (Biotium, USA)

1 KB Plus DNA Ladder (Invitrogen, USA)

Ethanol absolute (Merck-Millipore)

Isopropanol (Merck-Millipore)

Chloroform (Merck)

2X PCR Master Mix (GoTaq® Green Master Mix, Promega, USA)

Gel loading buffer BlueJuice™ 10X (Invitrogen, Lithuania)

1.5 and 2.0 ml Seal-Rite® microfuge tubes (USA Scientific)

Carbon steel balls 1.8”

Nuclease-free tips (Tip One, USA Scientific)

RQ1 RNase-Free DNase I (Promega, USA)

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2

Blastocystis Subtyping via PCR

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The DNA was extracted from fresh stool using the Norgen Stool DNA Isolation Kit (Norgen, Biotek Corporation) and stored at -20°C. PCR was performed with the 2X PCR Taq Plus MasterMix (Applied Biological Materials Inc ABM) using Blastocystis-specific primers F:5′-GAAGGACTCTCTGACGATGA-3'/R:5′-GTCCAAATGAAAGGCAGC-3' (351 bp) for subtype 1 (4), F:5′-CATGAGTAAAGTCCCGTWGGGA-3'/R:5′-CCCTTTTACAGTTCATTCGCCTA-3' (1500 bp) for subtype 2 (27) (link), and F:5′-TAGGATTTGGTGTTTGGAGA-3'/R:5′-TTAGAAGTGAAGGAGATGGAAG-3' (526 bp)
for subtype 3 (4) with the PCR setting parameters described in figure 1.
Electrophoresis was performed by adding 8 µl of the PCR products to a 1.7% agarose gel and staining with GelRed® Nucleic Acid Gel Stain, 10,000X in Water (Biotium Inc.) for 30 min at 100 V.
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