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235 protocols using ab32042

1

Western Blot Analysis of LX-2 Cell Protein

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LX-2 cells were collected after transfection and fully lysed using lysis solution to obtain total protein. After gel electrophoresis and nitrocellulose membrane blotting, the membranes were blocked with TBST containing 5% skim milk powder for 2 h. Thereafter, the membranes were transferred to dilutions containing GAPDH antibody (ab9485, 1:1000, Abcam, Shanghai, China), α-SMA antibody (ab5694, 1:1000, Abcam), Col1α1 antibody (ab166606, 1:1000, Abcam), and cleaved-Caspase3 antibody (ab32042, 1:1000, Abcam) and incubated at 4°C overnight. The membranes were washed thrice with TBST (15 min each) and incubated with the secondary antibody (ab7090, 1:1000, Abcam) at room temperature for 2 h. Finally, the membranes were developed using ECL chemiluminescent reagent.
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2

Extraction and Characterization of MO-B from Ophiopogon japonicus

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Ophiopogon japonicus was obtained from farms in Cixi (Zhejiang, China). MO-B was extracted from Ophiopogon japonicus using high-speed counter-current chromatography (19 (link)) and the yield was ~0.2–0.4 mg/g in tuber roots of Ophiopogon japonicus. High-performance liquid chromatography (HPLC) was conducted to measure the purity of MO-B, which was >97% (Fig. S1).HPLC was performed using a Shimadzu C18 column (5 µm 250×4.6 mm). The volume ratio of mobile solvents A (water) and B (acetonitrile) was maintained at 35:65, and the temperature was set at 30°C. The flow rate of the mobile phase was 1 ml/min. The detection wavelength was 285 nm. MO-B was then dissolved to 10, 20, 40 and 50 µM in dimethyl sulfoxide for cell treatment.
Antibodies targeting Bax (ab182733), Bcl-2 (ab182858), cleaved caspase-3 (ab32042), neutrophil cytochrome b light chain (p22phox; ab80896) and GAPDH (ab9482), goat anti-mouse horseradish peroxidase IgG (ab6789) and goat anti-rabbit IgG horseradish peroxidase (ab6721) secondary antibodies, were purchased from Abcam. Cell Counting Kit-8 (CCK-8), ROS and malondialdehyde (MDA) detection kits, radioimmunoprecipitation assay (RIPA) lysis buffer, a BCA Protein Assay kit and superoxide dismutase (SOD) assay kit with WST-8 were purchased from Beyotime Institute of Biotechnology.
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3

Western Blot Antibodies for TGF-β Signaling

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The following primary antibodies were used for immunoblotting according to our previously reported protocol: THBS1 (18204-1-AP, Proteintech, China), Pan-Keratin (4545 S, CST, USA), Smad2 (5339, CST, USA), Phospho-Smad2 (p-Smad2, 3108, CST, USA), Smad3 (9523, CST, USA), Phospho-Smad3 (p-Smad3, 9520, CST, USA) α-SMA (19245 S, CST, USA), caspase-3, cleaved caspase-3 (ab32042, Abcam, UK).
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4

Western Blot Protein Expression Analysis

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Protein expressions were determined using Western blot assay [33 (link)]. Total protein was extracted using RIPA cell lysate buffer containing a protease inhibitor cocktail. The protein concentration was then measured using the BCA method. The proteins were separated by SDS-PAGE gel electrophoresis and transferred to PVDF membranes. The membranes were then blocked with 5% BSA at room temperature for 50 min to eliminate nonspecific binding of primary and secondary antibodies. Primary antibody (cleaved-Caspase3 antibody, ab32042, 1:1000, Abcam; GAPDH antibody, ab9485, 1:1000, Abcam; PCNA antibody, ab18197, 1:1000, Abcam; CCND2 antibody, ab207604, 1:1000, Abcam;) was then added to the PVDF membrane and incubated overnight at 4°C. The next day, the membranes were probed with the corresponding HRP-labeled secondary antibody (ab7090, 1:1000, Abcam) by incubation at room temperature for 2 h. ECL chromogenic solution A and B were mixed, added dropwise to the position of the target band on the membrane, and photographed using ImageJ software.
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5

Quantifying Protein Expression via Western Blot

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The total protein was extracted using a radioimmunoprecipitation assay, and the bicinchoninic acid (Beyotime, Shanghai, China) method was employed to quantify the concentration. The protein sample was first electrophoresed for 2h; subsequently, the authors transferred the total protein onto polyvinylidene difluoride membranes (Millipore, Billerica, MA, USA). TBST containing 5% skim milk was used to block non-specific antigens for 1h following incubating with primary antibodies (caspase-3 [1:1,000, ab32351; Abcam], c-caspase-3 [1:1,000, ab32042; Abcam], CREB1 [1:1,000, ab32515; Abcam], p-CREB1 [1:1,000, ab32096; Abcam], Bcl-2 [1:1,000, ab182858; Abcam], PSD-95 [1:1,000, ab238135; Abcam], synaptophysin [1:1,000, ab32127; Abcam], synapsin [1:1,000, ab254349; Abcam], GAPDH [1:1,000, ab8245; Abcam], and β-actin [1:5,000, #A5441, Sigma]) at 4°C overnight. Membranes were washed with TBST three times and incubated with the secondary HRP-conjugated goat anti-rabbit IgG (1:5,000 dilution; cat. ab205719; Abcam). Subsequently, membranes were washed with TBST three times. Blots were then visualized using enhanced chemiluminescence (GE Healthcare Life Sciences, Little Chalfont, UK).
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Western Blot Analysis of DNA Damage Response

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Whole-cell protein lysates of treated cells were extracted and fractionated using sodium dodecyl sulfate-polyacrylamide gel electrophoresis and blotted onto nitrocellulose as previously described 14 (link). Protein expression was determined using the Western Lightning Plus-ECL detection system (NEL104001EA, PerkinElmer, MA, USA). Primary antibodies used: γ-H2AX (ab2893, abcam), activated caspase3 (ab32042, abcam), CHK2 pThr 68 (2661, Cell Signaling), CHK2 (3440, Cell Signaling), ATM pSer 1981 (5883, Cell Signaling) and GAPDH (MAB374, Millipore). Secondary antibodies used: anti-rabbit IgG, HRP-linked antibody (7074, Cell Signaling) and anti-mouse IgG, HRP-linked antibody (7076, Cell Signaling).
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7

Immunohistochemical Evaluation of Xenograft Tumors

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IHC assay was performed to examine the expression of Ki67, RHCG and c‐caspase3 in the xenograft tumors as previously described.23 The antibodies against Ki67 (ab15580), RHCG (ab187904) and c‐caspase3 (ab32042) were provided by Abcam.
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8

Evaluating EMT Markers in Lung Cancer

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Human lung cancer cells were transfected with the relevant plasmids and cultured for 36 h. For western blot analysis, cells were lysed in NP-40 buffer (10 mM Tris pH 7.4, 150 mM NaCl, 1% Triton X-100, 1 mM EDTA pH 8.0, 1 mM EGTA pH 8.0, 1 mM PMSF, and 0.5% NP-40) at 25 ˚C for 40 min. The lysates were added to 5× loading dye and then separated by electrophoresis. The primary antibodies used in this study were 1:1000 rabbit anti-Flag (sc-166384, Santa Cruz, Dallas, TX, USA) and 1:1000 Abcam (Cambridge, UK) antibody of UBE2C (ab12290), ZEB1 (ab203829), ZEB2 (ab138222), Vimentin (ab45939), E-cadherin (ab1416), cleaved Capase-3 (ab32042) and Tubulin (ab6046).
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9

Tryptamine-Induced Apoptosis in PC-3 Cells

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After treatment with various doses of tryptamine, PC-3 cells were lysed with RIPA lysis buffer (Beyotime, Shanghai, China) containing 1 mM PMSF, and the total protein concentration was determined by BCA Protein Assay Kit (Solarbio, Beijing, China). Samples were electrophoresed on a 10% sodium dodecylsulfate (SDS) polyacrylamide gel and electrotransferred onto polyvinylidene difluoride (PVDF) membrane (Beyotime, China). After blocking with 5% BSA for 1 h, the membrane was incubated with the primary antibodies rabbit anti-cleaved caspase-3 (1:1000, ab32042, Abcam) and anti-β-actin (1:1000, 4967S, Cell Signaling Technology, Boston, MA, USA) at 4 °C overnight, followed by incubation with horseradish peroxidase (HRP)-conjugated goat anti-rabbit secondary antibody (1:2000, 7074S, Cell Signaling Technology) for 1 h at 37 °C. After washing with TBST, the bands were visualized by the enhanced chemiluminescence kit (Thermo Fisher Scientific, Carlsbad, CA, USA) and Odyssey® imaging system (LI-COR, Lincoln, NE, USA) according to the manufacturers’ instructions.
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10

Western Blot Analysis of Apoptosis and EMT Markers

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Total proteins in HTR-8/SVneo cells after the indicated treatment were isolated with RIPA buffer. The protein concentration was detected by using a bicinchoninic acid (BCA) protein assay kit (Invitrogen, USA). After being subjected to a 12% gel sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE), the proteins were transferred onto polyvinylidene fluoride (PVDF) membranes. The membranes were then impeded with 5% skim milk for 2 h followed by incubation with primary antibodies against Bcl-2 (ab32124; 1:1000; Abcam, China), Bax (ab32503; 1:1000; Abcam), cleaved-caspase3 (ab32042; 1:500; Abcam), MMP2 (ab92536; 1:1000; Abcam), MMP9 (ab76003; 1:1000; Abcam), E-cadherin (ab40772; 1:10000; Abcam), N-cadherin (ab76011; 1:5000; Abcam), p-p38 (mAb #4511; 1:000; Cell Signaling Technology, USA), p-ERK1/2 (mAb #4370; 1:2000; Cell Signaling Technology), p-JNK (mAb #4668; 1:1000; Cell Signaling Technology), p38 (mAb #8690; 1:1000; Cell Signaling Technology), ERK1/2 (mAb #8544; 1:1000; Cell Signaling Technology), JNK (ab76125; 1:1000; Abcam) and GAPDH (ab8245; 1:500; Abcam) at 4˚C overnight. Thereafter, the membranes were washed with tris-buffered saline and Tween (TBST) for three times, followed by incubation of membranes with HRP-labeled secondary antibody. Finally, the protein bands were captured by improved chemiluminescence (ECL, USA).
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