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110 protocols using ecl select western blotting detection reagent

1

Western Blot Protein Detection Protocol

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Proteins were separated by SDS-PAGE and transferred to a polyvinylidene difluoride (PVDF) membrane. The membrane was blocked for 1 hr at room temperature with 5% milk in PBS containing 0.05% Tween-20 (PBS-T) and immunoblotted with primary antibodies diluted in PBS-T + 3% milk for 1 hr at room temperature or 16 hr at 4°C. After washing with PBS-T, the membranes were incubated with an appropriate HRP-conjugated secondary antibody. Immunoreactive bands were detected with ECL Select Western Blotting Detection Reagents (GE Healthcare) or Immobilon Western Detection Reagents (Millipore) and captured using a luminescent image analyzer (LAS-4000 mini, GE healthcare).
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2

Analysis of MAPK Signaling in THP-1 Cells

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THP-1 cells were incubated with 10 µM azelnidipine for 1 h and 50 ng/mL PMA was treated for 24 h. The cells were lysed using RIPA buffer containing NaF, trypsin inhibitor, leupeptin, β-glycerophosphate, and orthovanadate. Samples of THP-1 lysate were resolved on SDS-PAGE according to a standard protocol. After being transferred to polyvinylidene difluoride membranes, the samples were immunoblotted with primary antibodies followed by secondary antibodies conjugated to horseradish peroxidase. Bands were revealed using ECL Select Western Blotting Detection Reagents (GE Healthcare, Buckinghamshire, UK) and band density was quantified using Image J software. The following primary antibodies were used: p-p38 mitogen-activated protein kinase (MAPK) antibody (#9215), p-38 MAPK antibody (#9212), stress-activated protein kinases (SAPK)/ Jun-amino-terminal kinase (JNK) (#9252), p-SAPK/JNK (#9251), p-p44/42 antibody (#9101), and p44/42 antibody (#4695) which were all purchased from Cell Signaling (Danvers, MA).
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3

Inflammatory Response Pathway Evaluation

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RPMI 1640 medium, penicillin-streptomycin, 0.25% trypsin, fetal bovine serum, human TNF-α recombinant protein, and CM-H2DCFDA were purchased from Invitrogen (Carlsbad, CA, USA). RIPA Lysis and Extraction Buffer, Halt™ Protease Inhibitor Cocktail, and BCA Protein Assay Kit were purchased from Thermo Fisher Scientific (Waltham, MA, USA). Gallic acid, guanosine, uridine, thiazolyl blue tetrazolium bromide (MTT), dimethyl sulfoxide (DMSO), and phenylmethylsulfonyl fluoride (PMSF) were purchased from Sigma-Aldrich (St. Louis, MO, USA). The human CXCL8/IL-8 DuoSet ELISA, human CCL2/MCP-1 DuoSet ELISA, human IL-1β/IL-1 F2 Duoset ELISA, and human IFN-γ recombinant protein were purchased from R & D Systems (Minneapolis, MN, USA). All the antibodies used for Western blotting were purchased from Cell Signaling Technology (Danvers, MA, USA). ECL Select Western blotting detection reagents were purchased from GE Healthcare Life Sciences (Piscataway, NJ, USA).
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4

Extracellular Vesicle Protein Analysis

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Cells and EVs were lysed in RIPA buffer (50 mM Tris, pH 8.0, 0.6 M NaCl, 4% Triton X-100, 2% sodium deoxycholate, 0.1% SDS). Ten micrograms of cellular and EV total protein were applied per lane and separated by 10% SDS-PAGE. Proteins were electroblotted onto nitrocellulose membranes and stained with Ponceau S solution to check the protein loading. The membranes were destained, blocked with 10% (w/v) fat-free milk and then incubated with the primary antibodies: CD9 (Santa Cruz, Germany) (1:500), ALIX (Santa Cruz, Germany) (1:1000), TSG101 (Abcam, UK) (1:1000), β-actin (Abcam, UK) (1:4000) and Calnexin (Abcam, UK) (1:1000). After washing, the membranes were incubated with peroxidase - conjugated rabbit anti-mouse secondary antibody (Santa Cruz, Germany) (1:2000) or mouse anti-rabbit secondary antibody (Santa Cruz, Germany) (1:2000), washed and processed with ECL Select Western Blotting Detection Reagents (GE Healthcare, USA) according to manufacturer’s instructions.
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5

Western Blot Protein Analysis Protocol

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Extracted proteins were loaded onto a SDS–polyacrylamide gel electrophoresis (15%) and transferred onto a nitrocellulose membrane (AmershamTM Protran TM; GE Healthcare, Germany). Proteins were revealed by staining the membrane with Ponceau S dye (Sigma‐Aldrich). After incubation in blocking buffer (10 mM Tris–HCl pH 8.0, 150 mM NaCl, 0.05% Tween 20, 5% milk powder), the membranes were incubated overnight at 4°C with primary antibody. Primary antibody (see the reference below) was then removed and a 1 h incubation was done with horseradish peroxidase‐conjugated mouse or rabbit secondary antibody (1:10 000 or 1:5000 dilution, respectively; Jackson ImmunoResearch Laboratories, Baltimore, MD). Immunoblots were visualized on an ImageQuant LAS4000 system (GE Healthcare, Buckinghamshire, UK) using the ECL Select™ Western Blotting Detection Reagents (GE Healthcare). Western blot images are illustrated in FiguresS1 and S2.
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6

Lipin Protein Expression Analysis in Larval CNS

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Total protein was extracted from ten CNS samples at the third-instar larval stage. The CNS samples were homogenized in sample buffer (150 mM Tris-HCl pH 6.8, 10% SDS, 30% glycerol, 0.01% bromophenol blue, and 0.6 M dithiothreitol). Then, protein extracts were separated on SDS-polyacrylamide gels containing 8% acrylamide and transferred onto polyvinylidene fluoride (PVDF) membranes. After blocking for 1 h with PBST (PBS containing 0.1% Tween-20) and 5% skim milk, the membrane was incubated with rabbit anti-Lipin IgG (1 : 1000) produced in this study for 16 h at 4 ˚C. After washing with PBST, the membrane was incubated with horseradish peroxidase (HRP)-conjugated secondary antibody (1 : 1000, Cell Signaling) in PBST containing 5% skim milk at 25 ˚C for 1 h. Proteins were detected using ECL Select western blotting detection reagents (GE Healthcare, Chicago, USA), and images were taken using AE-9300H Ez-Capture MG (ATTO, Tokyo, Japan), followed by analysis with ImageJ (NIH, Bethesda, USA). The relative level of Lipin was normalized to α-tubulin.
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7

Quantification of Antioxidant Proteins in ARPE-19 Cells

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Total protein was extracted from cultured ARPE-19 cells using NP40 cell lysis buffer (Cat#FNN0021, Invitrogen, Frederick, MD), and the concentration was calculated by DC protein assay (Cat#500–0016, Bio-Rad, Philadelphia, PA). Equivalent amounts of extracted protein were loaded into each well and electrophoresed on a Nupage 4–12% Bis-Tris gel (Cat#NP0335BOX, Novex, Carlsbad, CA), then transferred to a 0.2μm PVDF membrane (Cat#ISEQ00010, Millipore, Billerica, MA), blocked with non-fat dry milk (Cat#9999, Cell signaling, Danvers, MA) and incubated with primary antibodies against MnSOD (Cat#16956, Abcam, Cambridge, MA) at 1:2000, TrxR2 (Cat#sc-46278, Santa Cruz Biotechnology, Dallas, TX) at 1:250, and GAPDH (Cat#5174, Cell Signaling Technology, Danvers, MA) at 1:1000, for 2 hours. The membrane was washed 3 times for 10 minutes each time and incubated with secondary antibodies at 1:10000 for 1.5 hours. After washing, membranes were incubated with the chemiluminescent substrate (Cat#RPN2235, ECL Select western blotting detection reagents, GE Healthcare Life Sciences, Piscataway, NJ) for 5 minutes. Band signals were detected by an image-scanning densitometer (ChemiDoc imaging system; Bio-Rad) and quantitated by Image J 2.0.
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8

Quantification of AKT Phosphorylation

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Western blotting was performed according to the method described previously [17 (link)]. In brief, protein extracts (10 µg) were separated by SDS/polyacrylamide gel electrophoresis and transferred to nitrocellulose membranes. The membranes were then hybridized with antibodies against AKT (Cell Signaling Technology 9272; 1/500) and phospho-AKT (Ser473, Cell Signaling Technology 9271, 1/500; Thr308, Cell Signaling Technology 9275, 1/500). Immunoreactivity was detected with ECL Select Western Blotting Detection Reagents (GE Healthcare Life Science, Marlborough, MA, USA) and imaged by Image Quant LAS 500 (GE Healthcare Life Science). An antibody against β-actin (C4) (Santa Cruz Biotechnology sc-47778; 1/5000) was used as an internal control. The band signal obtained was quantified using Image J and the ratio of p-AKT to β-actin expression was calculated. The whole images of Western blotting are shown in Supplementary Figure S1.
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9

Western Blot Analysis of RPE Cells

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RPE cells (2.5 × 105/well, 6-well plate) were seeded and cultured for 3 days. Before treatment with TNF-α and/or AICAR, cells were serum-starved for 24 hours in serum-free medium. After treatment, cells were washed with cold PBS and lysed in NP40 cell lysis buffer (Invitrogen, Carlsbad, CA) containing protease and phosphatase inhibitor cocktail (Roche, Indianapolis, IN). Samples were loaded onto a NuPAGE 4–12% Bis-Tris Gel (Novex, Carlsbad, CA), transferred to a polyvinylidene difluoride (PVDF) membrane (0.45 μm; Millipore, Billerica, MA), blocked with 5% non-fat dry milk, and incubated with appropriate primary antibodies. Blots were subsequently incubated with secondary antibodies and images were developed using chemiluminescent substrate (ECL Select western blotting detection reagents, GE Healthcare Life Sciences, Piscataway, NJ). Band signals were detected by an image-scanning densitometer (ChemiDoc imaging system; Bio-Rad) and quantitated by ImageJ 2.0.
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10

Western Blot Analysis of Heart Tissue

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The heart tissue was homogenized in RIPA buffer containing NaF, trypsin inhibitor, leupeptin, glycerophosphate, and orthovanadate. Samples of heart tissue lysate were resolved on SDS-PAGE according to a standard protocol. After being transferred to the membranes, the samples were immunoblotted with primary antibodies, followed by secondary antibodies conjugated to a horseradish peroxidase. Bands were revealed using ECL select western blotting detection reagents (GE Healthcare, Buckinghamshire, UK), and band density was quantified using the Image J software. The following primary antibodies were used: CD36 (#sc-9154) and actin antibodies (#sc-1616) were obtained from Santa Cruz biotechnology (Santa Cruz, CA). GLUT-4 antibody (#2213), cleaved caspase-3 antibody (#9661), phospho-AMPKα (Thr172) antibody (#2535), and LC3A/B (1/2) antibody (#12741), were purchased from Cell Signaling (Danvers, MA).
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