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4 protocols using anti cbp

1

Immunoblot Analysis of Yeast Complexes

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Yeast whole-cell lysates, the fractions from the glycerol gradient sedimentation, and the coimmunoprecipitated proteins were resuspended in SDS sample buffer, resolved on 8 or 10% SDS-PAGE (Tris-glycine running buffer), transferred to nitrocellulose membranes (Ambion) and incubated with anti-CBP (Millipore), anti-GFP (Sigma-Aldrich), anti-uL18 (gift from Dr Cleslei F. Zanelli, UNESP), anti-Nog1 (gift from Dr John L. Woolford Jr., Carnegie Mellon University) and anti-Pgk1 (Abcam). Secondary antibodies conjugated to IR700dye (anti-rabbit IgG, LI-COR) or IR800dye (anti-mouse IgG, LI-COR) were employed, and near-infrared Western blot detection was carried out using ChemiDoc MP Imaging System (BioRad) or Odyssey equipment (LI-COR). Images were processed using Image Studio™ Lite (ver. 5.2) software (LI-COR).
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2

Visualizing Protein Complexes in Yeast

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Cell extracts from strain MJM01 (Cdc5-GFP, Lea1-protein A, Snu114-CBP), MJM02 (Brr2-GFP, Lea1-protein A, Snu114-CBP), and MJM03 (Spp42-GFP, Lea1-protein A, Snu114-CBP) were used for Western blots. Total proteins were separated by 4%–12% SDS-PAGE and transferred to PVDF membrane. Western blots were carried out by using anti-GFP (SC-9996, Santa Cruz) with 800RD anti-rabbit IgG, anti-CBP (07-482, Millipore) with 680RD anti-mouse IgG, and detected on an Odyssey scanner (fluorescence).
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3

Epididymal Fat Protein Interaction

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Protein isolated from epididymal fat pads was incubated overnight with protein A/G magnetic beads (Millipore) and an Anti-SMRT (Millipore #17-10057) or Anti-GR (Santa Cruz #sc-1004) antibody. In the morning the beads were washed with RIPA buffer three times, then denatured in Laemmle buffer at 95°C. The resulting proteins were run on a western blot and probed with Anti-GR (Santa Cruz #sc-1004), Anti-CBP (#sc-369), Anti-Med1 (#sc-5334), Anti-PPARγ (#sc-7273), or Anti-SMRT (Millipore #17-10057) antibodies. Blots were performed at least three times.
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4

Protein Detection by Western Blotting

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Proteins were separated by SDS or Native PAGE and transferred to either a PVDF (Immobilon FL PVDF 0.45 µm, Millipore, Billerica, MA) or a nitrocellulose (Amersham Protran 0.45 µm NC, GE healthcare, Chicago, IL) membranes using standard methods. Antibodies used were anti-GFP (Roche, Basel, Switzerland) and anti-CBP (Millipore). Signals were visualized using an Odyssey IR scanner (LI-CORE Biosciences, Lincoln, NE).
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