The largest database of trusted experimental protocols

8 protocols using anti phospho histone h2a x ser139 antibody

1

Immunofluorescence of RNF4, AR, and γH2AX

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immunofluorescence was performed as previously described15 (link). The primary antibodies included anti-RNF4 antibody (Santa Cruz, CA, USA), anti-AR antibody (BIOSS, Beijing, China) and anti-Phospho-Histone H2A.X (Ser139) antibody (Cell Signalling Technology, Danvers, MA, USA). The secondary antibodies included donkey anti-goat FITC-IgG (Wuhan Guge, Wuhan, China), goat anti-rabbit Cy3-IgG (Wuhan Guge, Wuhan, China) and goat anti-rabbit FITC-IgG (Wuhan Guge, Wuhan, China).
+ Open protocol
+ Expand
2

Quantifying Senescence Biomarkers in Cardiac Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
The cellular senescence parameters were measured in baseline conditions and following senescence induction using the above method. Senescence was induced in the cardiac cells seeded in an 8-well chamber (15,000 cells per well). Cells were fixed in 4% paraformaldehyde (Electron Microscopy Sciences; 15710), and immunofluorescence staining was performed. Cells were stained with anti-Phospho-Histone H2A.X (Ser139) Antibody (Cell Signaling Technology; 2577) and immunofluorescence images were taken from 20 randomly selected, non-overlapping fields to spot DNA damage response foci using a fluorescence microscope (Nikon; Eclipse Ti-E). CellProfiler software was employed for the recognition of the γH2A.X-positive DDR foci and rendering of the data[Miller et al., 2019 ]. The same software was used to count the number of foci per nucleus. The cells that reached senescence and irreversible growth arrest were evaluated by the expression of the senescence-associated protein p16INK4a (Abcam; ab54210), transcription factor p53 (Cell Signaling Technology; 2527), and ser 15-phosphorylated p53 (Cell Signaling Technology; 9286).
+ Open protocol
+ Expand
3

Measuring DNA Damage Response in Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
For flow cytometric analysis, 24h after seeding, cells were either left untreated or were treated with 8ng/ml IlludinS for 1h. Treated cells were subsequently washed with PBS and supplemented with drug-free medium. The cells were harvested at different time points after treatment and fixed with 4% PFA for 10min at RT. Cells were quickly chilled on ice and ice-cold MeOH was added to a final concentration of 90%.
The cells were incubated on ice for 30min and stored at -20°C. For immunostaining the cells were washed twice with PBS/0.5%BSA and incubated with anti phospho-Histone H2A.X (Ser139) Antibody (1:250; Cell Signaling Technology) for 1h at RT, washed again and incubated with Alexa-488 conjugated secondary antibody for 45min at RT. For each condition 20.000 cells were recorded and data from two replicate experiments was analyzed using the FlowJo software (V10.1).
+ Open protocol
+ Expand
4

Immunohistochemical Analysis of Phospho-Histone H2AX

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tumors were fixed in 10% neutral buffered formalin (NBF) for 24–48 hrs, then processed and embedded in paraffin wax. 4 μm sections were cut onto electrostatically charged glass slides (Colorfrost®), de-waxed in xylene, and re-hydrated through graded alcohols. Heat induced antigen retrieval was performed using Dako Target Retrieval Solution (pH9.0) in a RHS-2 microwave (Milestone, Italy) at 110 °C for 2 minutes. Endogenous peroxide activity was blocked by immersion in 3% hydogen peroxide for 10 minutes and sections were subsequently incubated for 20 minutes with Background Blocker with Casein (A.Menarini Diagnostics Ltd, Berkshire) to reduce non-specific background staining. Immunohistochemistry was performed using a Labvision auto-stainer with X-Cell Plus polymer detection system (A.Menarini Diagnostics Ltd, Berkshire). Slides were incubated with rabbit polyclonal anti-phospho-histone H2AX (Ser139) Antibody (Cell signaling Technology), diluted 1:300 for 60 minutes at room temperature. Immunoreactivity was visualized using 3,3′ Diaminobenzidine (DAB) and slides subsequently counter-stained with haematoxylin.
+ Open protocol
+ Expand
5

Immunohistochemical Analysis of MSLN and PD-L1 Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols
MSLN expression in MC38-hMSLN was determined by IHC using SP74 antibody (Spring Bioscience).4 (link) PD-L1 expression was determined using anti-PD-L1 antibody (clone E1L3N, Cell Signaling Technology).
Murine CD8 T cells were detected using rat anti-mouse CD8 mAb (clone YTS169.4, AbD Serotec), and DNA DSBs using antiphospho-Histone H2A.X (Ser139) antibody (Cell Signaling). Fluorescent visualization was done on incubation with the Opal Fluo kit (Akoya Bio). Tissue slides were counterstained using 4’,6-diamidino-2-phenylindole (DAPI), and CD8 signals were quantified using HS Analysis Webkit tool (HS Analysis).
+ Open protocol
+ Expand
6

Immunofluorescence Analysis of γH2AX and Micronuclei

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immunofluorescence was performed on adherent cells grown on coverslips, fixed in cold methanol for 7 minutes at -20°C and permeabilized with 0.15% Triton X-100 (T8787, Sigma-Aldrich) in PBS, blocked with 4% Bovine serum albumin (BSA) (A4503, Sigma-Aldrich)/PBS for 1 hour at room temperature and incubated with anti-phospho-histone H2A.X (Ser139) antibody (1:100, 9718, Cell Signaling Technology, Danvers, MA, U.S). Nuclei were counterstained by bisbenzimide Hoechst 33258 (0.5 µg/ml, B2883, Sigma-Aldrich, St. Louis, MA, U.S.). Cell fluorescence was then evaluated using a Nikon Eclipse 90i microscope (Nikon Instruments, Florence, Italy). For quantification purposes, γH2AX spots and micronuclei were quantified from at least 20 random fields (~500 cells), expressed as γH2AX mean fluorescence intensity (MFI) and percentage of cells with micronuclei respectively. Images acquisition and processing were conducted using the NIS-Elements A.R. 3,10 software.
+ Open protocol
+ Expand
7

Gamma-Ray Induced H2AX Phosphorylation Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
H460 cells (1 × 105 cells/well) were seeded onto chambered slides and cultured overnight. After pretreatment with 10 μM A12B4C3 (an inhibitor of polynucleotide kinase/phosphatase) for 2 h, the cells were exposed to 0, 2 and 4 Gy of γ‐ray irradiation, and cultured for 6 h. Subsequently, the cells were sequentially fixed and penetrated with 4% paraformaldehyde for 30 min and 0.1% Triton X 100 for 30 min, respectively. The cells were then blocked with 20% normal goat serum. After 1 h, the cells were incubated with antiphospho‐histone H2AX (ser139) antibody (1:400 dilution, Cell Signaling Technology) and then with Alexa Fluor 555 anti‐mouse IgG (1:600 dilution, Cell Signaling Technology). Finally, the cells were counterstained with DAPI (Solarbio), and images were collected with a Leica TCS SP8 confocal microscope.
+ Open protocol
+ Expand
8

Quantification of Phospho-Histone H2A.X in CAP-Treated Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
D-17 cells were cultured on a 12-well plate and treated with CAP. After 24 h, cells were lysed with RIPA Cell Lysis Buffer (1X) with EDTA (GenDEPOT, Katy, TX, USA) supplemented with 100 μM of phenylmethylsulfonyl fluoride and sodium orthovanadate, respectively. Cell lysates were separated by 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis. After transfer to a nitrocellulose membrane (GVS Filter Technology, Sanford, ME, USA), the membrane was blocked with 5% skim milk in Tris-buffered saline (TBS) with 0.05% Tween 20 (TBS-T) for 1 h, followed by incubation with an anti-phospho-Histone H2A.X (Ser139) antibody (1:1000) (2577S; Cell Signaling Technology, Danvers, MA, USA) overnight. Three washes with TBS-T were performed for 10 min each. The membrane was incubated with a secondary antibody conjugated with horseradish peroxidase (1:5000) for 1 h at room temperature, and it was washed again with TBS-T. Phospho-histone H2A.X was detected using an enhanced chemiluminescence (ECL) western blotting detection reagent (Thermo Fisher Scientific, Waltham, MA, USA). The western blot image was taken using Alliance Q9 mini (UVTEC CAMBRIDGE, Cambridge, England, UK), which was analyzed with ImageJ software (National Institutes of Health, Bethesda, MD, USA). Anti-β-actin antibody (sc-47778; Santa Cruz Biotechnology, Dallas, TX, USA) was used for loading control.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!