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10 protocols using ab210823

1

Western Blot Analysis of Myocardial Proteins

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Tissues were lysed in RIPA buffer containing a protease inhibitor cocktail (Beyotime Institute of Biotechnology, Haimen, China). Total protein isolated from the myocardium was separated by SDS-PAGE and transferred to polyvinylidene difluoride (PVDF) membranes. The membranes were blocked in Tris-buffered saline with 0.1% Tween (TBST) containing 5% nonfat dry milk for 1 h at RT and then incubated in universal antibody diluent (New Cell & Molecular Biotech, Suzhou, China) using the appropriate primary antibody overnight at 4°C. The primary antibodies used in this experiment were specific to the following antigens: iNOS (1 : 1000; ab210823; Abcam, Cambridge, UK), Arg1 (1 : 1000; ab91279; Abcam, Cambridge, UK), C/EBPα (1 : 1000; 18311-1-AP; Proteintech, Chicago, USA), PU.1 (1 : 2000; ab88082; Abcam, Cambridge, UK), SOCS1 (1 : 1000; YT4362; Immunoway, Newark, USA), CD63 (1 : 1000; ab213090; Abcam, Cambridge, UK), HSP70 (1 : 1000; ab2787; Abcam, Cambridge, UK), and TSG101 (1 : 1000; ab125011; Abcam, Cambridge, UK). The membranes were incubated with HRP-conjugated secondary antibodies after washing in 5% TBST. Finally, the protein bands were detected using a gel chemiluminescence imaging analysis system and the Immobilon Western Chemiluminescent HRP Substrate reagent (Millipore, Billerica, USA) and then were analyzed using ImageJ.
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2

Macrophage Phenotype Characterization on Biomaterial Scaffolds

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The iNOS (green) and CD206 (red) expression of macrophages (RAW 264.7 ​cells) on different scaffolds, PEEK, SPK-15, SPK-30, and SPK-60, were evaluated by fluorescence staining. After incubation for 4 days, RAW 264.7 ​cells were obtained and reattached. Then, 4% paraformaldehyde was used to fix the cells, and 0.1% Triton-X was used to permeabilize the cells for 30 ​min. BSA (1%) was used to block for 1 ​h. The cells were then incubated with primary antibodies against iNOS (ab210823, 1:50, Abcam) and CD206 (ab64693, 1:50, Abcam) overnight at 4 ​°C. Subsequently, the sheep anti-rabbit Alexa Fluor 488 (1:100, Abcam) and sheep anti-mouse Alexa Fluor 594 (1:200, Abcam) were combined with the primary antibody for 1 ​h. Finally, the nuclei were stained with 4’,6-diamidino-2-phenylindole (DAPI). Images were acquired using a fluorescence microscope (Leica TCS-SP8, Leica Microsystems).
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3

Immunofluorescent Staining of Brain Sections

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Brain and spinal cord sections from the SVZ and LE in the mice of the four groups were deparaffinized, boiled with citrate buffer at 95°C for 20 min, cooled to 30°C, and blocked with 1% bovine serum albumin (BSA) at 37°C for 1 h. The sections were then incubated overnight at 4°C with primary antibodies against Olig2 (1 : 400; AF2418; R&D Systems, Minneapolis, USA), CC-1 (1 : 200; OP80; Merck Chemicals, Darmstadt, Germany), iNOS (1 : 200; ab210823; Abcam, Cambridge, UK), Arginase 1 (Arg1; 1 : 200; ab91279; Abcam, Cambridge, UK), Iba1 (1 : 200; ab48004; Abcam, Cambridge, UK), followed by 1 h of incubation with FITC- (1 : 400-) and TRITC- (1 : 200-) conjugated secondary antibodies (Southern Biotech, Birmingham, USA) at 37°C. Nuclei were counterstained with DAPI (Southern Biotech, Birmingham, USA). We used a fluorescence microscope to capture the images and then analyzed them using ImageJ.
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4

Immunofluorescence Staining of BV2 Cells

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For IF staining, a sterile round glass slide (18 mm) was placed on a 12-well plate and coated with 1× poly-lysine overnight. BV2 cells were seeded into the 12-well plate at a concentration of 1 × 105/cells the next day. Following the intervention, the treated cells were fixed for 20 min in precooled 4% PFA and permeabilized for 20 min at room temperature with 0.1% Triton X-100 (#T8200 Solarbio, Beijing, China). The fixed cells were blocked for 30 min at 37 °C with 3% bovine serum albumin (A6020 Biotopped, Beijing, China) and the sections were incubated overnight at 4 °C with primary antibodies against Iba-1 (1:800 #17198 Cell signaling, Danvers, MA, USA), iNOS (1:500 ab210823, Abcam, Cambridge, UK), and Arg-1(1:200 ab239731, Abcam, Cambridge, UK). Then, the sections were rinsed three times with PBS for 5 min before incubation for 1 h at room temperature with Alexa Fluor 488 goat anti-rabbit IgG (1:500, a-11008, Thermo Fisher Science, Waltham, MA, USA) and Alexa Fluor 555 donkey anti-mouse IgG (1:500, a-31570, Thermo Fisher science, MA, USA). Prior to the addition of DAPI, the sections were washed three times with PBS and then sealed with a coverslip. A fluorescence microscope (Olympus BX61, Tokyo, Japan) was used to observe the signals. The IF images were analyzed using ImageJ software (version 1.53, National Institutes of Health, USA).
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5

ALK Cytotoxicity Evaluation in RAW 264.7 Cells

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Dimethyl sulfoxide (DMSO), ultra-pure E. coli K12, LPS, and MTT were purchased from Sigma. ALK (98% purity) was purchased from Sichuan Victory (ALK structure is shown in Figure 1a). ELISA kits were purchased from R&D Systems. fetal bovine serum (FBS) and dulbecco’s modified eagle medium (DMEM) were obtained from HyClone. Antibodies were purchased from Abcam (Cambridge, UK) or Proteintech (Rosemont, IL, USA), including anti-iNOS (ab210823, Abcam), anti-COX-2 (ab169782, Abcam), anti-p-P38 (ab195049, Abcam), anti-p38 (ab170099, Abcam), anti-p-ERK1/2 (ab201015, Abcam), anti-ERK1/2 (ab17942, Abcam), anti-p-JNK (ab47337, Abcam), anti-IL-6 (ab233706, Abcam), anti-IL-1β (ab254360, Abcam), anti-TNF-α (ab183218, Abcam), anti-JNK (ab213521, Abcam), anti-p-p65 (ab76302, Abcam), anti-p65 (ab16502, Abcam), anti-p-IκB-α (ab133462, Abcam), anti-IκB-α (ab32518, Abcam), and anti- glyceraldehyde-3-phosphate dehydrogenase (GADPH; ab8245, Abcam).

ALK had limited cytotoxicity in RAW 264.7 cells. (a) the chemical structure of ALK was presented. (b) RAW264.7 cells were exposed to 1, 3, 5, 10 or 20 μM ALK for 24 h. The cell viability was assessed by MTT assay.

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6

Macrophage and Endothelial Cell Characterization

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Mouse-derived macrophage Raw264.7 was purchased from Shanghai Yuanzhixin Biotechnology Co (Shanghai, China). Mouse bone marrow-derived macrophages were primarily extracted from wild-type Balb/c mice, and the methods have been detailed previously [5 (link)]. Mouse aortic endothelial cells (MAECs) were purchased from Otwo Biotech Co (Shenzhen, China). CD68 antibodies (ab125212), inducible nitric oxide synthase (iNOS) antibodies (ab210823), CD31 antibodies (ab24590), α-SMA antibodies (ab21027), Collagen-I antibodies (ab260043), VE-Cadherin antibodies (ab33168), GADPH antibodies (ab9485), Alexa Fluor® 488-labeled donkey anti-mouse secondary antibody (ab150109), Alexa Fluor® 555-labeled donkey anti-rabbit secondary antibody (ab150062) were purchased from Abcam Co (Cambridge, MA, USA); Vimentin antibodies (10366-1-AP), F4/80 antibodies (28463-1-AP), CD206 antibodies (60143-1-Ig), Interferon-γ (IFN-γ) were purchased from Proteintech Co (Chicago, IL, USA); CD206 Cell Flow antibodies (17-2061-80), lipopolysaccharide (LPS; 00⁃4976⁃93) were purchased from Thermo Fisher Scientific Co (Waltham, MA, USA); iNOS Flow Cytology antibodies (130-116-421) was purchased from Miltenyi Biotec Co (Bergisch Gladbach, Germany); The primers were designed and synthesized by Nanjing DynaScience Biotechnology Co. TNF-α Antagonist III (R-7050; 303997-35-5) was purchased from Selleck. Co (Shanghai, China).
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7

Spinal Cord Injury Immunohistochemistry

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After 7 days of SCI, the rats were perfused with paraformaldehyde, dissected, and sectioned at the site of injury, paraformaldehyde-fixed, sucrose sunk and OCT embedded, followed by sectioning. Sections were treated with 0.3% TritonX-100 for 20 min and blocked with 5% BSA blocking solution at room temperature for 1 h. The appropriate primary antibody was added to the sections and incubated overnight at 4°C, including anti-FECR1G (1:100, DF13263, Affbiotech, China), anti-NFATC2 (1:100, A3107, Abclonal, China), and anti-iNOS (1:100, ab210823, Abcam, United Kingdom). Sections were incubated with a secondary antibody (1:200) at room temperature in the dark for 1 h. After washing with PBS for 10 min, cell nuclei were stained with DAPI.
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8

Immunofluorescent Quantification of Microglia

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Brain tissues were fixed in 4% paraformaldehyde and cut into sections of 30 μm in thickness. Sections were incubated overnight with primary antibodies including F4/80 (ab6640, Abcam), iNOS (ab210823, Abcam), or CD206 (Santa Cruz Biotechnology, CA, USA) at 4°C overnight. Then, sections were incubated with secondary antibody for 1 hour at room temperature. Nuclear staining was performed with DAPI (62,248, Thermo Scientific, MA, USA). The fluorescence images were captured by an LSM700 imaging system (Carl Zeiss, Aalen, Germany). The number of total F4/80/iNOS or F4/80/CD206 positive cells were counted using Image J software (National Institutes of Health, MD, USA).
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9

Immunofluorescent Staining of Mouse Aorta

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Paraffin-embedded sections of the mouse aorta were taken, dewaxed, dehydrated, and subjected to antigen retrieval. Sections were added with 0.03% Triton for 10 min and sealed with normal goat serum blocking solution (C-0005, HaoranBio, Shanghai, China) for 60 min at room temperature. For macrophages, macrophages were fixed with 4% paraformaldehyde for 30 min, washed with precooled PBS And sealed as the above. Next, primary antibodies of HMGB1 (66525-1-Ig, 1:250, Mouse, Proteintech, VA, USA), F4/80 (ab6640, 1:50, Rabbit, Abcam), GSDMD (sc-393581, 1:200, Mouse, SANTA, UC, USA), iNOS (ab210823, 1: 100, Mouse, Abcam), and CD206 (60143-1-Ig, 1:200, Mouse, Proteintech) were selected for sample incubation at 4 ℃ overnight. Then, the samples were incubated with fluorescent secondary antibody, Alexa Fluor® 647-Anti-Rabbit IgG (ab150075, 1:500, Donkey, Abcam) or Alexa Fluor® 488-Anti-Mouse IgG (ab150113, 1:500, Goat, Abcam) at room temperature for 60 min in the dark. A fluorescence microscope was utilized for observation, with fluorescence intensity recorded.
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10

Immunofluorescence Staining of Brain Sections

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For immunofluorescence staining, brain sections were pretreated with citrate buffer for 5 min for antigen retrieval, then blocked with immunostaining blocking solution (P0102, Beyotime, China) at room temperature for 1 h. Then the sections were incubated with rabbit anti-Oligo2 (1:100, ab109186, Abcam, UK) overnight at 4 °C. For double immunofluorescence staining, the sections were incubated with mixtures of rabbit anti-IBA-1 (1:300, 019-19741, Wako, Japan) or mouse anti-IBA-1 (1:300, 016-26721, Wako, Japan) and rabbit anti-TMEM119 (1:100, NBP2-30551, Novus, USA), mouse anti-iNOS (1:100, ab210823, Abcam, UK), rabbit anti-CD206 (1:100, ab64693, Abcam, UK), rabbit anti-TREM2 (1:200, PA5-87933, ThermoFisher, USA), and mouse anti-activin-A (1:50, ab89307, Abcam, UK); and mixtures of rabbit anti-NG2 (1:100, AB5320, Millipore, USA) and mouse anti-activin-A (1:50, ab89307, Abcam, UK), Acvr2B (1:100, ab128544 and ab180185, Abcam, UK); The next day, sections were incubated with secondary antibodies after washing with phosphate-buffered solution (PBS). In addition, sections were incubated with Rabbit anti-BCAS1 FITC conjugated (1:50, C01226F, SAB, China). Finally, sections were mounted with a solution containing 4′,6-diamidino-2-phenylindole (DAPI). Fluorescence signals were observed under a microscope (BX63, Olympus).
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