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10 protocols using pano multiplex ihc kit

1

Multiplex IHC for Immune Cell Profiling

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Two 4-µm sections from TMA blocks were subjected to mfIHC using the PANO Multiplex IHC kit (0004100100, Panovue, Beijing, China) to examine specific cell markers including CD11c (ab52632, Abcam), CD45RO (55618, Cell Signaling), CD68 (ZM0060, ZSGB-Bio), panCK (4545, Cell Signaling), and PD-L1 (13684, Cell Signaling) in panel A, and CD4 (BX50023, biolynx), CD8A (70306, Cell Signaling), CD56 (3576, Cell Signaling), FoxP3 (320202, Biolegend), and granzyme B (ab4059, Abcam) in panel B. Different primary antibodies were sequentially applied, followed by horseradish peroxidase-conjugated secondary antibody incubation and TSA. The slides were microwave heat-treated after each TSA operation. Nuclei were stained with 4ʹ-6ʹ-diamidino-2-phenylindole (DAPI, D9524, Sigma-Aldrich) after all the human antigens had been labeled.
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2

Multiplex IHC for Immune Cell Profiling

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The PANO Multiplex IHC kit (Panovue, Beijing, China) was used to examine specific markers of immune cells, including CD11c (Abcam), CD45RO (Cell Signaling), CD68 (ZSGB-Bio), panCK (Cell Signaling), and PD-L1 (Cell Signaling) in panel A, and CD4 (biolynx), CD8A (Cell Signaling), CD56 (Cell Signaling), FoxP3 (Biolegend), and granzyme B (Abcam) in panel B in two 4-µm sections from tissue microarrays blocks. Primary antibodies were applied, followed by horseradish peroxidase conjugated secondary antibody incubation. Then the slides were microwave heat-treated after tyramide signal amplification operation. Lastly, DAPI (Sigma-Aldrich) were subjected to stain the nuclei after all antigens had been labeled.
A Vectra Multispectral Imaging System (PerkinElmer) was used for getting images. One image per core was captured at 200x magnification and each multispectral image cube was performed by combining images obtained every 10 nm of emission light spectrum across the range of emission filter cube. Five filter cubes, including DAPI (440-680 nm), FITC (520-680 nm), CY3 (570-690 nm), CY5 (670-720 nm), and Texas Red (580-700 nm), were used for each image capturing.
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3

Multiplex IHC for Apoptosis and Ferroptosis

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The expression and localization of proteins involved in apoptosis and ferroptosis were identified using mIHC modified for adherent cells (patent pending), using a PANO Multiplex IHC Kit (0001100100; Panovue, Beijing, China).
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4

Multiplex Immunohistochemistry for Immune Cell Profiling

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PANO Multiplex IHC kit (Panovue) was used to examine specific cell markers including CD3 (Abcam, 16669), CD8 (ZSGB‐Bio, ZA0508), CD11c (CST, 45581), Clec9a (Abcam, ab223188), STING (CST, 13647). After the primary antibody was applied, the slides were incubated with secondary antibodies, followed by staining with fluorochrome (fluorochrome:tyramide signal amplification = 1:100). Next, the slides were subjected to microwave heat‐treated antigen retrieval in EDTA buffer (pH = 9.0) and then blocked with goat serum, followed by incubation with the next primary antibody. Nuclei were stained with DAPI after all of the antigens had been labeled. The stained slides were scanned using the Polaris Automatic Digital Slide Scanner (Akoya Biosciences, USA) which captured the fluorescence excitation spectrum at different wavelengths (480, 520, 620, 690, and 780 nm) within the proper exposure time. Multiple scans were combined to build a panoramic image. The images were analyzed and reconstructed images of sections by HALO image analysis software (lndica Labs, USA).
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5

Multiplexed Immunohistochemistry of ESCC

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Tissue microarrays (TMAs) were constructed with FFPE blocks of archived tumor specimens of the recruited 98 ESCC patients. Two 1-mm cores from representative areas of each tumor sample were punched and arrayed onto a recipient paraffin block. Tissue sections (4 µm thick) obtained from TMA blocks were subjected to multiplex fluorescent immunohistochemistry (mfIHC) staining using the PANO Multiplex IHC kit(0004100100, Panovue, Beijing, China) to examine specific cell markers including CD11c (ab52632, Abcam, Cambridge, UK), CD45RO (55618, Cell Signaling, Danvers, MA, USA), CD68 (ZM0060, ZSGB-Bio), panCK (4545, Cell Signaling), and PD-L1 (13684, Cell Signaling) in panel A and CD4 (BX50023, BioLynx, Brockville, ON, Canada), CD8A (70306, Cell Signaling), CD56 (3576, Cell Signaling), FoxP3 (320202, BioLegend, San Diego, CA, USA), and granzyme B (ab4059, Abcam) in panel B. Different primary antibodies were sequentially applied, followed by horseradish peroxidase-conjugated secondary antibody incubation and Tyramide signal amplification (TSA). After each TSA operation, the slides were microwave heat-treated. Nuclei were stained with 4′,6′-diamidino-2-phenylindole (DAPI, D9524, Sigma-Aldrich, St. Louis, MO, USA) after all the human antigens have been labeled (Pan et al., 2021 (link)).
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6

Multiplex Profiling of Immune Cells in ESCC

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The compositions of major immune cells in TLSs of ESCCs were examined on FFPE ESCC slides using mfIHC and the PANO Multiplex IHC kit (Panovue, BJ, China) with antibodies for CD20 (Abcam, Boston, MA), CD21 (Abcam), Ki67 (Abcam), CD4 (Abcam), CD8 (ZSGB‐BIO, Beijing, China), LAMP3 (Abcam) and 4ʹ‐6ʹ‐diamidino‐2‐phenylindole (DAPI) as described previously.7 The stained slides were scanned using a Vectra Polaris Automated Quantitative Pathology Imaging System and batch analysed with HALO imaging analysis software (Indica Labs, Corrales, NM). Each TLS was segmented into a B cell zone (CD20+ cell and CD21+ cell‐clustered region) and a T cell zone (CD4+ cell and CD8+ cell‐clustered region). Cells in TLSs were phenotyped as B cells (CD20+), FDCs (CD21+), proliferating cells (Ki67+), CD4+ T cells (CD4+), CD8+T cells (CD8+) and mature DCs (LAMP3+). The intensity for each marker was recorded. The intratumoural infiltration of CD8+ T cells, CD4+ Th cells, Treg cells, memory T cells, natural killer cells, DCs and macrophages were evaluated on ESCC tissue microarrays as previously described.7
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7

Multiplex Immunohistochemistry for Tumor Microenvironment

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Multiplex immunohistochemistry (mIHC) was performed using the PANO Multiplex IHC kit (Panovue, 10144100100). Formalin-fixed paraffin-embedded sections (3.5 µm) were deparaffinized and rehydrated. Each slide underwent several cycles of staining, including heat-induced epitope retrieval with citrate buffer (pH=6.0) or Tris/EDTA (pH=9.0), endogenous peroxidase blocking with 3% H2O2, and non-specific protein blocking with 10% goat serum, followed by incubation of primary antibodies and corresponding horseradish peroxidase-conjugated secondary antibody (Panovue, 10013001040). Finally, tyramide signal amplification dyes were applied to amplify fluorescence signals. The following primary antibodies were used in sequential rounds of staining: HIF-1α (SANTA CRUZ, Cat#sc-13515, 1:200), CD8α (CST, Cat#98941, 1:500), PD-1 (CST, Cat#84651, 1:400), CD31 (CST, Cat#77699, 1:500), α-SMA (ProteinTech, Cat#14 395–1-AP, 1:12000), Ki67 (Abcam, Cat#ab16667,1:200), GZMB (CST, Cat#44153, 1:200), CXCR3 (Abcam, Cat#ab288437, 1:500), CXCL10 (ProteinTech, Cat#10 937–1-AP, 1:500). Slides were then counterstained with DAPI (Beyotime, C1005) and mounted with antifade mountant (Panovue, 10022001010).
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8

Multi-Marker Immunohistochemistry Workflow

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mIHC was carried out as instructed in the manuals of the PANO Multiplex IHC kit (Panovue, Beijing, China; 10144100100). Subsequent to formalin fixing and paraffin embedding, the sections underwent dewaxing and rehydration. After heat-induced epitope retrieval with citrate buffer (pH = 6.0) or Tris/ethylenediaminetetraacetic acid (pH = 9.0), each section was treated with 3% H2O2 for endogenous peroxidase blocking and with 10% goat serum for non-specific protein blocking. After that, the sections underwent incubation with primary antibodies, including CD206 [Cell Signaling Technologies (CST), Beverly, MA, USA; 91992; 1:400], CD8α (CST, 70306, 1:400), CD4 (Abcam, Cambridge, UK; ab133616; 1:500), forkhead box P3 (FoxP3; CST; 98377; 1:100), and alpha-smooth muscle actin (α-SMA; Proteintech, Wuhan, China; 14395-1-AP; 1:10000), and corresponding horseradish peroxidase-conjugated secondary antibodies (Panovue, 10013001040). Next, fluorescence signals were amplified with tyramide signal amplification dyes, followed by nucleus counterstaining with 4′,6-diamidino-2-phenylindole (DAPI; Beyotime, Shanghai, China; C1005) and section sealing with the antifade mounting medium (Panovue, 10022001010). The sequential staining protocol is detailed in Supplementary Table 7.
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9

Multiplex IHC for Adherent Cells

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Multiplex immunohistochemistry modified for adherent C-33A and HeLa cells was performed to identify the protein expression and localization using the PANO Multiplex IHC Kit (0001100100, Panovue, Beijing, China).
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10

Multimodal IHC Analysis of SPP1 in PDAC

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To explore the expression and distribution of SPP1 in PDAC and normal pancreatic tissues, formalin-fixed paraffin-embedded (FFPE) sections from cancerous and adjacent normal tissues were subjected to multiple IHCs using PANO Multiplex IHC kit (Panovue, Beijing, China, cat# 0079100100). Briefly, sections were deparaffinized in fresh xylene, rehydrated in a decreasing concentration of ethanol, then washed three times with PBS. The antigen retrieval was performed with the microwave heating method and cooled down for at least 10–15 min in an ice-water bath. Blocking was performed with a blocking solution (Panovue, China, cat# 0018001120) for 10 min at room temperature, followed by incubation with a primary antibody for 30 min, a secondary antibody for 10 min, and TSA Opal fluorophores for 10 min. Antigen retrieval, blocking, primary and antibody incubation, TSA Opal fluorophore staining were repeated for each marker. Finally, all sections were counterstained with DAPI (Sigma-Aldrich, USA, cat# D9542) for 5 min and mounted. Sections were scanned using the panoVIEW VS200 (Panovue, Beijing, China). Images captured and quantitative analysis were conducted using the HALO software. The following primary antibodies were used: SPP1 (Abcam, Cambridge, UK, cat# ab214050), CD68 (ZSGB-Bio, Beijing, China, cat# ZM0060), and PanCK (CST, Boston, MA, USA, cat# 4545).
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