The largest database of trusted experimental protocols

6 protocols using primaria dishes

1

Hepatocyte Lipid Metabolism Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Dulbecco's modified Eagle's medium (DMEM), Met/Cys-free DMEM, Williams Medium E, Hepatozyme medium, fetal bovine serum (FBS), and antibiotic/antimycotic were purchased from Invitrogen Canada (Burlington, ON). Heparin, fibronectin, and fumed silica were purchased from Sigma-Aldrich (Oakville, ON). The Primaria dishes were from BD Biosciences (Mississauga, ON), and the [35S]Met/Cys was obtained from MP Biochemicals (Solon, OH). Protease inhibitor cocktail and chemiluminescent substrates were purchased from Roche Diagnostics (Laval, PQ). The antibody to detect hHL (by immunoblot analysis) was obtained from Santa Cruz Biotechnology, Inc. (Santa Cruz, CA, USA), the antibodies to detect mouse apoE and apoA-I (for immunoblot and immunoprecipitation) were purchased from BioDesign International (Saco, ME, USA), and the antibodies to detect mouse calnexin and giantin were obtained from Stressgen Bioreagents (Ann Arbor, MI, USA) and Abcam (Cambridge, MA, USA), respectively. The anti-hHL antibody used for immunoprecipitation of HL was a kind gift from Dr. Ann White (University of Texas Southwestern Medical Center).
+ Open protocol
+ Expand
2

Dissociation and Culture of Tumor Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Brains with MB were dissected out and transferred into PBS on ice. Blood and fat tissues were removed from the tumor mass under a dissecting microscope and the tumor tissue pieces were washed again with PBS. Tumor tissues were minced with a scalpel, passed through syringes with 18- and 22-gauge needles, and then incubated in a 1 : 1 mixture of Accutase (Sigma) and TrypLE (Invitrogen) for 15 min at 37 °C with occasionally vortex. Undigested tissues were removed by filtering with 40 μm cell strainer (Falcon, 352340). Dissociated cells were washed twice with Dulbecco’s modified Eagle medium (DMEM)/F12 medium followed by centrifugation at 2000 r.p.m. for 5 min. Cells were then resuspended and plated onto uncoated dishes in Neurobasal and DMEM/F12 media (1 : 1 mix) containing N2 and B27 supplements (Invitrogen), and human recombinant FGF2 and EGF (20 ng/ml, PEPROTECH). Five to 7 days later, cell spheres were dissociated in Accutase (Sigma-Aldrich) and plated onto Primaria dishes (BD Biosciences) coated with Poly-l-ornithine solution (Sigma-Aldrich) and mouse laminin (Sigma-Aldrich) to allow adherent growth.
+ Open protocol
+ Expand
3

Establishing Patient-Derived Tumor Spheres

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tumor tissue collected after surgery was minced with a scalpel, passed through syringes with 18- and 22-gauge needles, and then incubated in a 1:1 mixture of Accutase (eBioscience, San Diego, CA, USA) and TrypLE (Invitrogen) for 10 min at 37 °C. The dissociated cells were washed twice with DMEM medium followed by centrifugation at 500 × g for 8 min before being plated onto uncoated dishes in Neurobasal media and DMEM media (1:1 mix) containing N2 and B27 supplements (Invitrogen) and human recombinant FGF2 and EGF (10 ng/ml, PEPROTECH). Five to 7 days later, the spheres were plated onto Primaria dishes (BD Biosciences) coated with mouse laminin (Sigma-Aldrich) to allow adherent growth as described previously73 (link). Cells were maintained and passaged as adherent cultures.
+ Open protocol
+ Expand
4

Retinal Cell Dissociation and Transduction

Check if the same lab product or an alternative is used in the 5 most similar protocols
Retinal dissociates from P0‐2 mice were resuspended in REM (Appendix Tables S3 and S4) and plated at a concentration of 3 × 107 cells in 10 ml of REM into 10 cm Primaria™ dishes (353801, BD Falcon, BD Biosciences, Oakville, ON, Canada). Lentiviruses were added to the plate at a titre to achieve > 80% infection efficiency. All cultures were maintained in 5% CO2‐buffered incubators (50116048, Heracell™ 150i CO2, Thermo Fisher Scientific, Asheville, NC, USA) at 37°C. After 2  DIV, cells were de‐adhered with Trypsin‐EDTA (0.05% Trypsin with EDTA 4Na) (25300062, Thermo Fisher Scientific, Mississauga, ON, Canada) for 5 min and the enzymatic digestion was stopped with 10% BSA. Cells were washed in Ca2+/Mg2+ ‐free PBS four times and filtered through a 40‐μm cell strainer. To confirm that GFP expression was not the result of lentivirus carryover in donor cell preparation, for every transplantation experiment we injected 2 μl of the final cell wash to the SRS in three different animals and analysed GFP expression after 21 days. Cells were resuspended at a concentration of 200,000 cells per μl in 0.005% DNAse in EBSS and kept on ice prior to transplantation or cell culture.
+ Open protocol
+ Expand
5

Angiogenic Potential of PBMNCs in MMD

Check if the same lab product or an alternative is used in the 5 most similar protocols
To determine the angiogenic potential of PBMNCs, cells derived from patients with MMD (n = 23), patients with MMD-O (n = 7), and controls (n = 23) were cultured in semisolid medium (MethoCult SFBIT; STEMCELL Technologies Inc., Vancouver, British Columbia, Canada) with provasculogenic growth factors/cytokines on 35-mm Primaria dishes (BD Falcon, USA) as reported previously10 (link),11 (link). EPC colonies that adhered to the dishes were then counted9 (link). Aliquots of the cells were seeded at 2 × 105 cells/dish (three dishes per PBMNCs/cultured PBMNCs) for the EPC-CFA. The number of adherent colonies per dish was measured using a gridded scoring dish (STEM CELL Technologies, Canada) under a phase-contrast light microscope (Eclipse TE300; Nikon, Tokyo, Japan) 16 to 20 days after the initiation of the culture.
We measured the numbers of small- and large-cell colonies per dish after IL-10 (Pepro Tech, Inc., TX, USA) or anti-IL-10 (Abcam, UK) antibody was added to the freshly isolated PBMNCs or those cultured from patients with MMD (n = 7), patients with MMD-O (n = 3) and controls (n = 6).
+ Open protocol
+ Expand
6

Endothelial Progenitor Cell Colony Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Fresh PBMNCs derived from healthy volunteers and corresponding QQMNCs were seeded at a concentration of 2 × 105 cells/dish in 35-mm Primaria dishes (BD Falcon) and cultured for 16–18 days using the EPC-CFA system (Methocult SFBIT; STEMCELL Technologies Inc., Vancouver, BC, Canada). The semi-solid culture medium was supplemented with a growth factor/cytokine mixture of 66.7 ng/mL SCF, 33.3 ng/mL VEGF, 33.3 ng/mL basic fibroblast growth factor (FGF), 33.3 ng/mL EGF, 33.3 ng/mL insulin-like growth factor 1 (IGF-1), 13.3 ng/mL IL-3 (Peprotech, Rocky Hill, NJ, USA), 1.33 IU/mL heparin (Shimizu Pharmaceutical Co., Shizuoka, Japan), and 30% fetal bovine serum (SAFC Biosciences, St. Louis, MO, USA). After 16–18 days in culture, the colonies in each dish were enumerated under an inverted microscope (Nikon Corporation, Tokyo, Japan) at 40× magnification, as described previously10 (link). Two types of EPC colony-forming units (EPC-CFU) were observed and determined: primitive EPC-CFU (pEPC-CFU) and definitive EPC-CFU (dEPC-CFU)5 (link),12 (link),13 (link).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!