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11 protocols using lichroprep si 60

1

Mouse Plasma Oxytocin Extraction and Assay

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Mouse blood samples were centrifuged (5 min, 5 000 rpm, 4 °C), and plasma samples (50 μl) were kept at −20 °C until the extraction step performed at 4 °C as follows: 20 mg of heat-activated (700 °C) LiChroprep Si 60 (Merck) in 1 ml distilled water was added to each sample, mixed for 30 min and centrifuged; the pellet was mixed in 60% acetone to elude the neuropeptide; the evaporated extracts were kept at −20 °C. The plasma OT content was estimated using a highly sensitive and specific radioimmunoassay (RIAgnosis, Munich) (43 (link), 44 (link)). In brief, 0.05 ml of rabbit anti-OT antibody was applied for 60 min and 0.01 ml of 125I-labeled tracer (Perkin Elmer) were then added to each aliquot. After an incubation period of 3 days at 4 °C, unbound radioactivity was precipitated by activated charcoal (Sigma Aldrich).
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2

Analytical Techniques for Compound Characterization

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TLC analysis was performed on pre-coated TLC plates with silica gel 60 F254 (Merck, Darmstadt, Germany). Column chromatographic separations were performed on silica gel 60 (70–230 mesh, Merck, Darmstadt, Germany). 1H and 13C-NMR spectra were recorded on a Bruker DRX-850 MHz Ultrashield spectrometer (Bruker BioSpin, Billerica, MA, USA) using CDCl3 as solvent, with TMS as the internal reference. Medium pressure liquid chromatography (MPLC) was performed on LiChroprep RP-18 and LiChroprep Si 60 (size A and B, Merck Co., Kenilworth, NJ, USA).
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3

Chromatographic Techniques for Compound Isolation

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TLC was carried out on precoated Silica gel 60 F254 (0.25 mm, Merck) and RP-18 F254S (0.25 mm, Merck Co., Dermstadt) and spots were detected under UV light or after spraying with anisaldehyde-H2SO4 reagent followed by heating. Column chromatography (CC) was carried out on (BW-820MH silica gel), Wakosil C-300 (40–64 µm) (Wako, Osaka, Japan), ODS DM 1020T (ODS, Fuji Silysia, Nagoya, Japan), Diaion HP-20 (Mitsubishi Kasei, Tokyo, Japan) and Sephadex LH-20 (Pharmacia Co.). Medium pressure liquid chromatography (MPLC) was performed on LiChroprep RP-18 and LiChroprep Si 60 (size A and B, Merck Co.). HPLC analysis was conducted on Agilent 1200 liquid chromatography equipped a photodiode array detector. A C18 reversed-phase packing column (4.5 mm×15 cm, 5 µm) were used for separation throughout this study.
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4

Plasma Oxytocin Measurement Protocol

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We used 5 ml of EDTA blood for the assessment of plasma OT concentrations. After venous puncture, the 5 ml EDTA vacutainer tubes were immediately cooled in ice-chilled water at 4°C. The samples were then centrifuged at 4°C at 4000 rpm for 5 min, aliquoted and stored at -20°C. After completion of the study, plasma samples were sent on dry ice to Munich, Germany. After extraction using LiChroprep Si60 (Merck), the samples were analyzed using a sensitive radioimmunoassay (RIAgnosis, Munich, Germany; see (Martin et al., 2014 (link)). The assay detection limit was 0.1 pg/sample, and cross-reactivity with other related neuropeptides was <0.7%. The coefficient of variation for intra-assay precision was <8%, whereas inter-assay variation was eliminated by measuring all samples within the same assay.
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5

Characterization of Bacterial Quorum Sensing

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All common chemicals and solvents are analytical reagent grade from worldwide recognized brands. Bis(trimethylsilyl)-trifluoroacetamide (BSTFA) and Lobar prepacked column size A [LiChroprep Si 60 (40–63 μm)] were purchased from Merck. Polyamide 6 was purchased from Fluka. Pinocembrin was isolated from Bulgarian propolis as described in our earlier work [28 (link)]. Purified standards of N-acyl-homoserine lactones (AHLs) QS signals were purchased from Cayman Chemical Co. (Ann Arbor, MI, USA). Abbreviations for N-acyl homoserine lactones (AHLs) include the following: C4-HSL, N-butanoyl-homoserine lactone and 3-oxo-C12-HSL, N-3-oxo-dodecanoyl homoserine lactone. Bacto agar was purchased from VWR International, Radnor, Pennsylvania. The antibiotic gentamycin and other chemicals were purchased from Sigma-Aldrich (St. Louis).
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6

Analytical Techniques for Natural Product Characterization

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Optical rotations were measured with a Jasco P-2000 polarimeter. Nuclear magnetic resonance (NMR) spectra were recorded on a Bruker AVANCEII + 600 NMR spectrometer operating at 600 MHz (150 MHz for 13C). High-resolution electrospray ionization mass spectra (HRESIMS) were obtained on Thermo Scientific Q Extractive Plus Mass spectrometer with Orbitrap Analyser. Vacuum liquid chromatography (VLC) was performed on Silica gel 60H (15 μm, Merck, Darmstadt, Germany). Low-pressure liquid chromatography (LPLC) was carried out on LiChroprep Si 60 Merck column (40–63 μm). Column chromatography (CC) was performed on Silica gel 60 (63–200 μm, Merck), silver nitrate-impregnated silica gel (~10 wt.% loading, 230 mesh, Sigma-Aldrich, St. Louis, MO, USA) and Sephadex LH-20 (25–100 μm, Pharmacia Fine Chemicals, Uppsala, Sweden). Preparative thin-layer chromatography (PTLC) was performed on Silica gel 60F254 glass plates (20 × 20 cm, 0.25 mm, Merck). Detection of the spots was achieved under UV light at 254 and 366 nm, and subsequently spraying with vanillin in sulfuric acid and heating at 100 °C. All solvents used were of analytical grade.
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7

Spectroscopic Analysis and Chromatographic Techniques

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NMR spectra were recorded on a Bruker AVANCE II+ 600 NMR spectrometer operating at 600 MHz (150 MHz for 13C). Optical rotation was measured on a Jasco P-2000 polarimeter. Vacuum liquid chromatography (VLC) was performed on Silica gel 60H (Merck, 15 μm). Column chromatography (CC) was performed on Silica gel 60 (Merck, 63–200 μm) normal phase, and Sephadex LH-20 (Pharmacia Fine Chemicals, 25–100 μm). Low pressure liquid chromatography (LPLC) was carried out with LiChroprep Si 60 Merck column (40–63 μm). Preparative thin-layer chromatography (prep. TLC) was performed on Silica gel 60 F254 glass plates (Merck, 20 x 20 cm; 0.25 mm). Detection of the spots was achieved under UV light at 254 and 366 nm, and by spraying with vanillin in sulfuric acid, followed by heating at 100°C. All solvents used were of analytical grade.
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8

Postpartum Maternal Oxytocin Measurement

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Maternal peripheral oxytocin at 3-months postpartum was assessed from blood samples, analysed at a commercial facility based in Germany using the radioimmunoassay (RIA) method. Blood samples were collected in vacutainer tubes and centrifuged at 3000 RPM for 10 min. Plasma was then pipetted and stored at -20 °C until extraction, at which time 20 mg heat-activated (700 uC) LiChroprep Si 60 (Merck) in 1 ml distilled water was added to each sample, mixed for 30 min and centrifuged. Pellets were then washed with distilled water and 0.01 N acidic acid and mixed in 60% acetone. Evaporated extracts were kept at -20 °C.
Assay buffer (0.05 ml) was added and oxytocin assessed using a radioimmunoassay. Antibody (0.05 ml) and l-labeled tracer (0.01 ml) were added to each aliquot and after a 3-day incubation period, unbound radioactivity was precipitated by activated charcoal. All evaporated plasma extracts were treated identically. The detection limit was in the 0.5 pg/ sample range and antiserum cross-reactivity was less than 0.7%.
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9

Oxytocin Radioimmunoassay Protocol

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Saliva samples were assayed by RIAgnosis according to a previously described procedure 17. Briefly, samples were extracted using LiChroprep Si60 (Merck, Hesse, Germany) which was heat‐activated at 700°C for three hours. After evaporation using a SpeedVac High Capacity Concentrator (Thermo Scientific, Waltham, MA, USA), 50 μL of assay buffer was added. The oxytocin was then measured with a highly sensitive and specific radioimmunoassay, standardised and validated in human studies. The detection limit was in the 0.5 pg/sample range, the intra‐assay variation was <8%, and the <0.7% cross‐reactivities were considered negligibly small 18.
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10

Analytical Techniques for Compound Characterization

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Optical rotations were taken using a Jasco P-2000 polarimeter (Jasco, Kyoto, Japan). The IR spectra (ATR) were obtained with an FT/IR-6000 FTIR spectrometer (Jasco, Kyoto, Japan). The UV spectra were determined on a Hitachi-U5100 ratio beam spectrophotometer (Hitachi, Tokyo, Japan). The circular dichroism spectra were recorded on a JASCO J-810 CD spectrometer. High-resolution electrospray ionization-mass spectrometry (HRESI-MS) were obtained on a Bruker APEX II mass spectrometer (Bruker, Karlsruhe, Germany). The NMR spectra were run on a Varian Mercuryplus-400/VNMRS-600 spectrometer (Varian, Inc. Vacuum Technologies, Ave, Lexington, MA, USA). Column chromatography was carried out with glass columns packed with silica gel (LiChroprep® Si 60, 25–40 mesh; Merck, Darmstadt, Germany) and RP-18 (LiChroprep® RP-18, 15–25 mesh; Merck, Darmstadt, Germany). Medium-performance liquid chromatography (MPLC) was performed using a VSP-3050 EYELA ceramic pump (EYELA, Kyoto, Japan). Further purification steps were performed by high-performance liquid chromatography (HPLC) using a JASCO HPLC LC-4000 (JASCO Corporation, Tokyo, Japan) with a photodiode array detector.
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