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Protein g sepharose

Manufactured by Santa Cruz Biotechnology
Sourced in United States

Protein G Sepharose is an affinity chromatography resin composed of Protein G, a bacterial-derived protein, immobilized on Sepharose beads. Protein G has a high affinity for the Fc region of immunoglobulins, making it useful for the purification of antibodies from complex mixtures.

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19 protocols using protein g sepharose

1

Affinity Purification of PDP2 and Phospho-ACSL4

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Immunoprecipitation was performed on a whole-cell lysate of MCF-7 cells that had been co-transfected with, or without, sgPDP2 and HA-PDP2 plasmids. The lysate was incubated overnight at 4°C with antibodies against PDP2, ACSL4, and pACSL4, and then incubated for two hours with Protein G Sepharose (Santa Cruz Biotechnology, sc-2002, CA). Subsequently, the immune complexes were washed three times with PBS and analyzed using Western blotting as previously reported [42 (link)].
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2

Reciprocal Co-IP of SK2 and RyR2

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Reciprocal Co-IP was performed as previously reported [17] (link). Protein samples from the mice atrial tissues were prepared and incubated with anti-SK2 antibody or anti-RyR2 antibody overnight at 4°C, followed by an additional incubation with 30 µl of protein G sepharose (Santa Cruz) for 6 h at 4°C. The precipitated proteins were analyzed with western blotting (see methods).
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3

Immunoprecipitation and Immunoblotting for Protein Interactions

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The cells transfected with the corresponding plasmids were harvested and lysed in a lysis buffer (50 mM Tris-HCl pH 7.5, 150 mM NaCl, 1 mM EDTA, 0.5% Triton X-100, 10% glycerine, 1 mM protease inhibitor PMSF). The lysates were incubated with the anti-Flag M2 affinity gel (Sigma-Aldrich) or the anti-GFP affinity gel (MBL, Japan) at 4 °C for 4 h. After eight times of washing with the lysis buffer, the precipitated proteins were eluted from the gel by 0.1 M glycine-HCl (pH 3.0) buffer and neutralized with 1 M Tris-HCl (pH 7.5) containing 1.5 M NaCl then resolved by SDS-PAGE followed by immunoblotting. To detect the interaction of the endogenous proteins in BT474 cells, the cell lysate was incubated with rabbit anti-HBXIP, rabbit anti-HOXB13, or the negative control IgG along with protein G-Sepharose (Santa Cruz Biotechnology). The subsequent procedures were same as above.
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4

HCAEC Growth Media Preparation

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HCAEC growth media was from Cell Applications, Inc. Normal-glucose (NG, 5 mM D-glucose) Dulbecco’s Modified Eagle Medium (DMEM), HG (25 mM D-glucose) DMEM, trypsin and antibiotics were from GIBCO-BRL Invitrogen. Fetal bovine serum (FBS) was from Omega Scientific, and bovine serum albumin (BSA), Na3VO4, NaF, Tween-20 and D-glucose were from Sigma-Aldrich. Polyvinylidene difluoride (PVDF) membranes were from Immobilon and Bradford assay reagent was from Bio-Rad. Epi, protease and phosphatase inhibitor cocktail (P8340, P0044 and P2850), NG-nitro-L-arginine methyl ester hydrochloride (L-NAME), D-glucose and anti-TFAM were obtained from Sigma-Aldrich. O-(2-acetamido-2-deoxy-D-glucopyranosylidene) amino N phenylcarbamate (PugNac) was purchased from Toronto Research Chemicals. Protein-G-sepharose was from Santa Cruz Biotechnologies.
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5

Detecting MLH1 Protein Interactions in Tissues

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Immunoprecipitations were carried out using 2000 µg of whole protein extract from FFPE tissue or HEK293 cells in a total volume of 1000 µL precipitation buffer (250 mM HEPES-KOH (pH 7.6), 100 mM NaCl, 100 mM EDTA, 0.2 mM PMSF, 200 mM DTT, 1% Triton X-100) with 4 µg of anti-MLH1 (G168-728). After agitated incubation at 4 °C for 1 h, 25–50 µL protein G sepharose (Santa Cruz Biotechnology, Heidelberg, Germany) were added and incubation continued for 4 h/overnight with gentile agitation. Precipitates were extensively washed in cold precipitation buffer using SigmaPrepTM spin columns (Sigma, Munich, Germany). The sepharose was boiled in Laemmli sample buffer (Sigma Aldrich, Germany) for 5 min and proteins were separated on 10% polyacrylamide gels, followed by Western blotting on nitrocellulose membranes and antibody detection using standard procedures.
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6

Protein Interaction Identification via Affinity Purification

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After 48 h of transfection with the appropriate plasmids, the cells were collected and lysed in a lysis buffer (10% glycerin (w/v), 1 mmol/L EDTA, 50 mmol/L pH 7.5 Tris-HCl, 0.5% Triton X-100 (v/v), 150 mmol/L NaCl, 1 mmol/L PMSF). The products were interacted with Flag M2 affinity gel (Sigma–Aldrich) at 4 °C for 4 h. To explore the endogenous interaction proteins in MCF-7 or LM-MCF-7 cells, protein G-Sepharose (Santa Cruz Biotechnology) was incubated with the negative control IgG, or anti-NMHC-IIA, anti-PKCβII and anti-HBXIP, then were incubated with the cell lysate. After washing with the washing buffer for eight times, the affiliative proteins were washed out from the gel with washing buffer and then separated by SDS-PAGE and immunoblotting.
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7

Reciprocal Co-Immunoprecipitation Protocol

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Reciprocal co‐immunoprecipitation (co‐IP) was performed as previously reported.35 In brief, 300 μg of solubilized proteins isolated from the adult mouse heart or from HEK293 cells was incubated with anti‐JP2, anti‐SK2 or anti‐RyR2 antibodies overnight at 4°C, and control groups (Ctrl‐N) were incubated with IgG antibodies of non‐mouse and non‐rabbit sources, followed by an additional incubation with protein G Sepharose (Santa Cruz Biotechnology, La Jolla, CA, USA) for 6 hour at 4°C. Protein‐bead complexes were washed three times with a high‐salt buffer (50 mmol L−1 Tris pH 8.0, 1 mol L−1 NaF, 500 mmol L−1 NaCl, 0.5% NP‐40 and complete protease inhibitor mixture), then a low‐salt buffer (50 mmol L−1 Tris pH 8.0, 1 mol L−1 NaF, 250 mmol L−1 NaCl, 0.5% NP‐40, and complete protease inhibitor mixture) and finally a salt‐free buffer (50 mmol L−1 Tris pH 8.0, 1 mol L−1 NaF, 0.5% NP‐40, and complete protease inhibitor mixture) to remove non‐specific binding. The immune complexes were assessed with immunoblot analysis with anti‐JP2, anti‐SK2 or anti‐RyR2 antibodies.
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8

Detailed Western Blot and Immunofluorescence Protocols

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Western analysis was carried out as described previously [13] (link). Production of anti-SUMO and anti-eIF4GI (against the KRERK epitope) antisera has been described elsewhere [41] (link), [42] (link), anti-myc antibodies for immunofluorescence were purified from cell supernatant (cell line CRL1729, from ATCC) using protein G-sepharose or were from Santa Cruz (sc-40), anti-HA antisera were from Santa Cruz (sc-7392) and monoclonal anti-tubulin antibodies were from Sigma (T5168). Immunofluorescence was undertaken as described in Moreno et al. [43] (link). Cells were observed using an Applied Precision Deltavision Spectris microscope using deconvolution software.
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9

Immunoblotting and Co-Immunoprecipitation Assay

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Cells were lysed and subjected to immunoblotting as described previously46 (link),47 (link). For co-immunoprecipitation, cells were lysed in Co-IP buffer (50 mM Tris-HCl, pH 7.5; 150 mM NaCl; 5 mM MgCl2; 10% glycerol and 1% NP-40) supplemented with cOmplete EDTA-Free Protease Inhibitor (Sigma-Aldrich) by incubation for 30 min at 4 °C. Cell pellets were removed by centrifugation and the supernatants were precleaned by incubation with rat or mouse IgG and Protein G Sepharose (GE Healthcare Life Sciences, Pittsburgh, PA, USA) for 30 min at 4 °C under gentle rotation. After centrifugation, the supernatants were co-immunoprecipitated by incubation with anti-HA affinity matrix (11815016001, Sigma-Aldrich), anti-DYKDDDDK tag antibody beads (018-22783, Wako Pure Chemical Industries), or anti-c-myc (9E10) antibody (sc-40, Santa Cruz Biotechnology, Santa Cruz, CA, USA) conjugated with Protein G Sepharose at 4 °C under gentle rotation overnight. The beads were washed with Co-IP buffer three times and then boiled in Laemmli sample buffer. The eluates were subjected to immunoblotting.
qRT-PCR was performed using the primers shown in Supplementary Table S1 as described previously48 (link).
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10

Immunoprecipitation and Western Blot Analysis

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Cells were lysed 36–48 h after transfection of expression plasmids using 50 mM Tris–HCl, pH 8.0, 150 mM NaCl, 1% Triton X-100 containing cocktail. For immunoprecipitation, lysates were incubated with the appropriate antibodies for 2 h on ice, followed by precipitation with protein G Sepharose (Santa Cruz). Samples were separated by SDS–PAGE and transferred to PVDF membranes. After blocking in PBS containing 0.1% Tween-20 and 5% skim-milk, the blots were probed with indicated antibodies. Westernblot visualization was done with enhanced chemiluminescence.
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