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5 aza 2 desoxycytidine

Manufactured by Merck Group
Sourced in United States

5-aza-2'desoxycytidine is a synthetic compound used as a research tool in molecular biology laboratories. It functions as a DNA methyltransferase inhibitor, which can be used to study the role of DNA methylation in various biological processes.

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2 protocols using 5 aza 2 desoxycytidine

1

CRHBP Expression in RCC Cells

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RCC cells were grown after thawing in normal medium (RPMI1640, 2 mM L-Glutamin, 100 μg/ml Streptomycin, 10% FCS, Biochrom, Berlin, Germany) for 7 days. After passaging cells were treated on day 2–4 with 0,125 μM 5-aza-2`desoxycytidine (Sigma, St. Louis, USA) or a mock solution (control cells) and cultured in normal medium on days 5–7 until harvesting. Isolation of total RNA, reverse transcription and relative quantitation of mRNA levels of internal controls as well CRHBP mRNA were carried out as described before [7 (link)].
For ectopic expression of CRHBP 3μg of human cDNA expression vector (NM_001882, Origene Technologies, Rockville, MD, USA) and PerFectin transfection reagent (T303007, Genlantis, San Diego, CA, USA) were applied according to the manufacturer´s instructions in a transfection volume of 1 ml for 6*105 cells
CHO cells were used as control for transfection and expression efficiency. For SDS-PAGE and Western blot analysis each 0,5 x 106 transfected cells were lysed in 100 μl 2x sample buffer (125 mM Tris-HCl pH 6,8, 20% Glycerol, 4% SDS, 5% Mercaptoethanol, 0,025% Bromphenolblue). Immunoprobing was carried out by use of the anti-Flag-POD antibody (A8592, Sigma-Aldrich, St. Louis, MO, USA).
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2

Evaluating miR-654 Expression in AZA-Treated Cells

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OAW28 and A2780 cells were treated with DMSO or the DNA methyltransferase inhibitor 5'AZA-2'desoxycytidine (Sigma). At the indicated time points, cells were used for miR-654 evaluation. MEG3 (Chr.14), GBGT1 (Chr.9) and MAGE-A3 (Chr.X) genes were used as positive control.
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