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2 protocols using rpe65

1

Quantitative Western Blot Analysis

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Total cell lysate and ECM were isolated and resolved by SDS-PAGE in 4% to 20% gels as previously described.17 (link) Resolved gels were transferred to polyvinylidene difluoride membranes (Bio-Rad, Hercules, CA, USA) and probed with the following primary antibodies: ACTN (1:750; Santa Cruz Biotechnology, Dallas, TX, USA), BEST1 (1:500; Millipore, Billerica, MA, USA), COL4 (1:1000; Abcam, Cambridge, MA, USA), CRALBP (1:10000),25 (link) EZR (1:1000, Cell Signaling Technology, Danvers, MA, USA), LAM (1:1000; Abcam), OCLN (1:1000; Thermo Fisher Scientific), RPE65 (1:500; Millipore), RHO (1:500; Millipore), and TIMP3 (1:250; Abcam). Secondary antibodies were host-specific near-infrared (1:12,500) (LiCor, Lincoln, NE, USA) or horseradish peroxidase conjugated (1:10,000) (Jackson ImmunoResearch, West Grove, PA, USA) and signals were detected on the LiCor Odyssey or the Azure C500 (Azure Biosystems, Dublin, CA, USA) imaging systems. After image acquisition, Western blot data were analyzed quantitatively using LiCor Odyssey 3.0 and/or Image Studio Lite version 5.2 (LiCor) and Microsoft Excel (Redmond, WA, USA).
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2

Immunohistochemical Profiling of Retinal Cells

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Retinal sections were stained with the following antibodies with our published protocols (34 ,35 (link)) Cone-arrestin (rabbit polyclonal, 1:1,000; Millipore), PKCα (rabbit polyclonal, 1:5,000; Sigma), recoverin (rabbit polyclonal, 1:2,000; Millipore), calbindin D28k (rabbit polyclonal, 1:1,000; Swant), neurofilament-RT97 (mouse monoclonal, 1:1,000; Millipore), parvalbumin (rabbit polyclonal, 1:3,000; Swant), synaptophysin (mouse monoclonal, 1:2,000; Millipore), RPE65 (mouse monoclonal, 1:1,000; Millipore), type IV collagen (rabbit polyclonal, 1:1,000; Millipore), MAB1281 (mouse monoclonal, 1:300; Millipore), nestin (rabbit polyclonal, 1:2,000; Millipore), GFAP (rabbit polyclonal, 1:1,000; Sigma), S100β (mouse monoclonal, 1:250; Sigma), Ki67 (rabbit polyclonal, 1:500; Millipore), TuJ1 (mouse monoclonal, 1:1,000; Sigma), STEM121 (mouse monoclonal, 1:300; StemCells). Anti-mouse or rabbit secondary antibodies conjugated to Alexa Fluor-488 or Alexa Fluor-568 (Life Technologies) were used and counterstained with 49,69-diamidino-2-phenylindole (DAPI). Images were taken with a confocal microscope (Eclipse C1si; Nikon Instruments, Inc., Melville, NY).
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