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Avance neo

Manufactured by Bruker
Sourced in United States, Switzerland, Germany

The Avance Neo is a high-performance nuclear magnetic resonance (NMR) spectrometer developed by Bruker. It is designed to provide precise and reliable measurements for a wide range of applications in chemistry, materials science, and life sciences research. The Avance Neo's core function is to generate and detect radio frequency (RF) signals, which are used to analyze the magnetic properties of samples, allowing researchers to obtain detailed information about molecular structure and dynamics.

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109 protocols using avance neo

1

NMR Spectroscopy and HRMS Analysis

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1H NMR spectra and 13C NMR spectra were recorded on a Bruker AVANCE NEO (400 MHz/500
MHz/600 MHz) spectrometer and Bruker AVANCE NEO (100 MHz/125 MHz/150
MHz) spectrometer at 25 °C, respectively. High resolution mass
spectra (HRMS) were measured with an Agilent 6230 TOF instrument.
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2

High-Field NMR Spectrometer Comparison

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The following spectrometers were used in this study: Bruker Avance NEO 900 MHz (21.1 T) equipped with a 5 mm TCI Cryoprobe (basic transmitter frequency, BF1 = 900.35 MHz); Bruker Avance III 950 MHz (22.3 T) equipped with a 5 mm TCI Cryoprobe (BF1 = 950.2 MHz); Bruker Avance NEO 1.2 GHz (28.2 T) equipped with a 3 mm TCI Cryoprobe (BF1 = 1200.85 MHz). For comparison with the in-cell NMR samples, reference SNR values were measured on a 3-mm standard sample of 0.1% Ethylbenzene (EB) in CDCl3, giving 2988 at 900 MHz, 3028.1 at 950 MHz and 5274.1 at 1.2 GHz. Notably, the 3-mm reference SNR values obtained at 900 MHz and 950 MHz were lower than those obtained by rescaling the reference SNR values measured on a 5-mm standard sample of 0.1% EB in CDCl3 (10,256.8 at 900 MHz and 10,783 at 950 MHz) by the ratio of the inner sections of 3 mm (i.d. = 2.42 mm) and 5 mm (i.d. = 4.24 mm) NMR tubes (rescaled SNR values: 3341.3 at 900 MHz and 3512.7 at 950 MHz), due to the loss of efficiency of 5-mm probes in terms of SNR/number of spins when analyzing 3-mm samples.
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3

NMR Spectroscopy of Biomolecular Samples

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Samples for NMR experiments were dissolved
(in Na+ form) in either D2O or 9:1 H2O/D2O and 25 mM sodium phosphate buffer. The pH was adjusted
by adding aliquots of concentrated HCl or NaOH. All NMR spectra were
acquired on Bruker Neo Avance spectrometers operating at 600 and 800
MHz equipped with cryoprobes and processed with the TOPSPIN software.
2D NMR experiments for spectral assignment and acquirement of experimental
constraints were recorded at T = 5 °C. A jump-and-return
pulse sequence was employed to observe the rapidly exchanging protons
in 1D H2O experiments. NOESY spectra in D2O
and 9:1 H2O/D2O were acquired with mixing times
of 150 and 250 ms. TOCSY (total correlation spectroscopy) spectra
were recorded with the standard MLEV-17 spin-lock sequence and a mixing
time of 80 ms. In most of the experiments using H2O, water
suppression was achieved by including a WATERGATE module in the pulse
sequence prior to acquisition. The spectral analysis program SPARKY
was used for semiautomatic assignment of the NOESY cross-peaks and
evaluation of the NOE intensities.
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4

NMR Backbone and Side-chain Resonance Assignment

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All NMR spectra were recorded at 25 °C on 500 MHz Agilent DirectDrive 2 and 700 MHz Bruker Neo Avance spectrometers equipped with room temperature triple-resonance probes. A two-dimensional 1H-15N-HSQC and three-dimensional HNCACB, CBCA(CO)NH, HN(CA)CO and HNCO experiments were used to obtain the backbone resonance assignments. Additionally, a two-dimensional 1H-13C-HSQC and three-dimensional (H)CC(CO)NH-TOCSY, H(CCO)NH-TOCSY, 1H-15N-TOCSY-HSQC, 1H-15N-NOESY-HSQC and 1H-13C-NOESY-HSQC experiments were used for side-chain assignments. Aromatic side-chains of phenylalanines and tyrosines were assigned with aromatic 1H-13C-HSQC experiments. Data was processed with NMRPipe (Delaglio et al. 1995 (link)) and the CcpNMR software package was used for resonance assignment (Vranken, 2005 (link)).
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5

High-Field 73Ge NMR Experiments

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73Ge NMR experiments were performed on a 20 T Bruker Neo
Avance spectrometer equipped with a low-gamma 4 mm HX probe tuned
to X = 73Ge at ν0 = 29.66 MHz. One-dimensional
NMR spectra were acquired under static conditions using the WURST-QCPMG
and Double Frequency Sweeps (DFS) DFS spin echo pulse sequences,42 (link)−44 (link) and the experimental parameters were varied in an attempt to detect
signal. The unfavorable NMR properties of 73Ge (see Table S1) precluded the observation of 73Ge resonances.
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6

Polymer Characterization by NMR Spectroscopy

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The copolymers
(anhydrides and acids) were characterized by nuclear magnetic resonance
(NMR) spectroscopy. To this end, solid polymer samples (20–60
mg) were dissolved in 0.5 mL of deuterated solvent (DMSO-d6). 1H and 13C NMR spectra were
recorded at 298 K using a Bruker Avance Neo (600 MHz) spectrometer
equipped with a cryogenic probe. Chemical shifts are reported with
respect to residual solvent peaks. Data was processed using MestReNova
software (Mestrelab Research S.L.).
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7

Quantitative NMR Spectroscopy Protocol

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NMR data were acquired in a Bruker Avance Neo operating at a 1 H frequency of 400.13 MHz, using a spectral window of 6.25 KHz, a 90° pulse width of 14µs, acquisition time of 3 s, and a relaxation delay of 2 s. Water suppression was accomplished through presaturation during the relaxation delay. Typically, 16 scans were acquired for each sample. Raw FID data were processed using software package TopSpin 4.0.2 using an exponential window of 0.3 Hz and 65,536 points. Samples were prepared by dissolving 50 µl of sample into 540 µl of D2O and were transferred to a 5‐mm NMR tube.
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8

Metabolite Profiling of NMR Spectra

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NMR data were acquired on a Bruker 700 MHz Avance NEO spectrometer with a TCI cryoprobe and 60-sample changer. The pulse sequence was a 1D presaturation NOESY with 100 ms mixing time, 4s data acquisition, 1s recycle delay, with 12 steady state scans and 1024 scans for about 1.5 hours of total sampling. The data were processed and analyzed with Chenomx version 8.4 (Alberta, Canada) to measure metabolite concentrations. Metabolites were identified with the help of the standard chemical library in Chenomx, by assessing the splitting patterns and corresponding peak intensities. Concentrations were measured with reference to DSS. The total number of spectra analyzed includes several duplicate data sets. The extraction was repeated and analyzed for 12 days in 2016, and the NMR data acquisition was repeated for 6 days. These are annotated in Supplementary Table 1. The final data set includes 129 days plus 18 replicates for 147 spectra analyzed.
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9

Synthesis and Characterization of l-Histidine-Ammonium Chloride

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All reagents were procured from Alfa, Aldrich (Miami, FL, USA), and further utilized without purification. In a 10 mL closed brown vial attached with a septum, a solution of H2O/MeCN (2 mL/2 mL) within l-histidine (2.0 g) was purged with N2 for 15 min, and then 4 equivalents of NH4Cl was mixed. Afterward, the solution was stirred at room temperature for about 2 h. The resultant suspension was dried in vacuum, and the powder was purified by water and Et2O subsequently. Then, the residue was dried in vacuum to obtain the purified product. The structure was analyzed by Fourier transform infrared spectroscopy (FTIR; Thermo Scientific Nicolet; Waltham, MA, USA), nuclear magnetic resonance spectroscopy (NMR; Bruker AVANCE NEO; Karlsruhe, Baden-Württemberg, Germany), and high-resolution mass spectra (HRMS; Finnigan LTQ-FT instrument; Waltham, MA, USA), respectively.
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10

GC Analysis of Pantolactones and Ketopantolactone

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The details of the method for analyzing l-pantolactone, d-pantolactone, and ketopantolactone by gas chromatography (Agilent 7890A, Agilent Technologies, Inc., Santa Clara, CA, USA) are as follows: detector: FID; chiral capillary column: BGB-174 (30 m × 250 µm × 0.25 µm; BGB Analytik, Böckten, Switzerland); carrier gas: N2; flow rate: 30.0 mL/min; split ratio: 30:1; injection volume: 1 µL; injector and detector temperature: 250 °C [8 (link)]. The column temperature was kept constant at 175 °C for 10 min. The retention times for d-pantolactone, l-pantolactone, and ketopantolactone were 6.19, 6.51, and 6.78 min, respectively (Figure S9).
Upon completion of the catalytic reaction, the reaction mixture was treated with ethyl acetate; then, the product in the resulting organic phase was collected through evaporation of the solvent. The resulting crude product was validated by GC-MS (Agilent 7890A/5975C, Agilent Technologies Inc., Santa Clara, CA, USA) using previously reported parameters (Figure S10) [8 (link)]. The crude product was dissolved in CDCl3 for NMR analysis (Avance NEO, Bruker, Switzerland) to further verify the remaining product, d-pantolactone. The NMR spectroscopy was operated at 600 MHz for 1H and 151 MHz for 13C detection (Figure S11).
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