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24 protocols using anti human cd45

1

MSC Cell Surface Marker Expression

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The expression of positive and negative MSC cell surface markers was evaluated using flow cytometry. P5 cMSCs at 80% to 90% confluency were detached using TrypLE. The collected cMSCs (5 × 105 cells per sample) were incubated for 1 hour in the dark at room temperature with Cell Staining Buffer (BioLegend, San Diego, CA) and cell surface antibody diluent: human anti-CD90, 1:100 (BioLegend); human anti-CD73, 1:100 (BD Pharmingen, San Diego, CA); human anti-CD45, 1:100 (BioLegend); and human anti-HLA-DR/MHC II, 1:100 (BioLegend). Then, the cells were washed three times in cold PBS using centrifugation at 350 ×g for 10 minutes at 4°C. The final cell pellet was re-suspended in cold PBS containing 10% fetal calf serum and analyzed using a CytoFLEX Flow Cytometer (Beckman Coulter, Inc., Brea, CA) within 2 hours. Data were analyzed using FlowJo software (FlowJo LLC, Ashland, OR).
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2

Characterization of Cardiac MSCs

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The MSCs used in this study were further characterized by their surface marker expression. The protocol for characterizing cells isolated from heart samples published by Monsanto et al.3 (link) was used. Live human BM MSCs and cardiac failing and non-failing hMSCs in passages 3–5 were stained using human anti-CD 117 antibody (R&D Systems), human anti-CD90 antibody (Biolegend), human anti-CD105 antibody (Biolegend), human anti-CD45 (Biolegend), human anti-CD133 (R&D Systems). Stained cells were counted using a benchtop flow cytometer (BD Accuri™ C6, BD Biosciences). Gating and analysis were performed using the BD Accuri software.
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3

Comprehensive Immune Cell Profiling

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The following antibodies were used for the present study.
Anti-mouse CD3, clone number 17A2, BioLegend, 05112-40-100, V450;
Anti-mouse CD4, clone number GK1.5, BioLegend, 100434, PerCP/Cyanine5.5;
Anti-mouse CD8, clone number 53-6.7, BioLegend, 100714, APC/Cyanine7;
Anti-mouse CD25, clone number 3C7, BioLegend, 101908, FITC;
Anti-mouse CD69, clone number H1.2F3, BioLegend, 104508, PE;
Anti-mouse CTLA-4, clone number UC10-489, BioLegend, 106305, PE;
Anti-mouse PD-1, clone number 29F.1A12, BioLegend, 135210, APC;
Anti-mouse CD19, clone number 1D3, eBioscience, 12-0193-82, PE;
Anti-mouse CD45, clone number 30F11, BioLegend, 103122, Alexa Fluor 488;
Anti-human CD45, clone number HI30, BioLegend, 304025, PerCP;
Anti-mouse IFNγ, clone number XMG1.2, eBioscience, PE;
Anti-mouse IL-17A, clone number TC11-18H10.1, BioLegend, Alexa Fluor 647;
Anti-mouse IL-13, clone number 13A, BioLegend, PE/Cyanine7;
Anti-mouse Foxp3, clone number MF14, BioLegend, PE;
Anti-mouse TNFα, clone number MP6-XT22, BioLegend, Alexa Fluor 488;
Purified Anti-mouse IFNγ antibody, clone number XMG1.2;
Purified anti-mouse IL-4 antibody, clone number 11B11.
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4

Characterization of Mesenchymal Stem Cells

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MBMSCs were analyzed by flow cytometry to detect cell surface antigens previously reported as criteria for identifying MSCs [23 (link)]. MBMSCs were harvested with trypsin and EDTA, centrifuged at 1500×g for five minutes, and resuspended at 1 × 104 cells/ml in PBS containing 0.5% bovine serum albumin, 2 mM EDTA, and FcR Blocking Reagent (Miltenyi Biotec, Bergisch Gladbach, Germany). Aliquots were then incubated with individual antibodies: anti-human CD73 (phycoerythrin (PE)-conjugated mouse IgG1; BioLegend, San Diego, CA, USA), anti-human CD90 (fluorescein isothiocyanate (FITC)-conjugated mouse IgG1; BioLegend), anti-human CD105 (FITC-conjugated mouse IgG1; Ancell Corp., Bayport, MN, USA), anti-human CD14 (FITC-conjugated mouse IgG1; BioLegend), anti-human CD34 (PE-conjugated mouse IgG1; BioLegend), and anti-human CD45 (FITC-conjugated mouse IgG1; BioLegend). FITC-conjugated mouse IgG1 (BioLegend), and PE-conjugated mouse IgG1 (BioLegend) were the isotype controls. Flow cytometric analysis was performed with Guava easyCyte 5 (Merck, Darmstadt, Germany), and data analysis was performed using Guava Express Pro (Merck).
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5

Immune Reconstitution in Humanized Mouse Model

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Human immune cell reconstitution in hu-mice was analyzed by flow cytometry (FCM) using various combinations of the following monoclonal antibodies: anti-human CD45, CD3, CD4, CD8, CD45RA, CD45RO, CD69, CCR7, CD31 (all purchased from Biolegend, San Diego, CA, USA); and anti-mouse CD45 (BD Pharmingen) and Ter119 (Biolegend, San Diego, CA, USA). Peripheral blood was collected from tail vein into heparinized tubes, and mononuclear cells were purified by density gradient centrifugation with Histopaque-1077 (Sigma-Aldrich, St. Louis, MO, USA). FCM analysis was performed on a FACS Fortessa (BD Biosciences). Dead cells were excluded from the analysis by gating out lower forward scatter and high propidium iodide–retaining cells. Data analysis was performed using FlowJo 10.3 software.
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6

Characterizing MSC Surface Markers

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The expression of surface markers on MSCs was
investigated using the following antibodies. Anti-mouse
CD34 (PE, eBiosience, USA), anti-mouse CD44 (APC,
BD, USA), anti-mouse CD45 (APC-cy7, Biolegend,
USA), anti-mouse CD73 (PE, BD, USA), anti-mouse
CD90 (APC, BD, USA), anti-mouse CD105 (PE,
eBiosience, USA), anti-mouse Sca1 (FITC, Biolegend,
USA), anti-mouse CD3 (PE, BD, USA), anti-human
CD90 (APC, Biolegend, USA), anti-human CD105 (APC,
Biolegend, USA), anti-human CD29 (PE, eBiosience,
USA), anti-human CD45 (FITC, Biolegend, USA) and
anti-human CD34 (PE, eBiosience, USA). Passage 2 cells
were used for the analysis of cell surface markers by flow
cytometry (FACS calibur, Becton Dickinson, USA). For
flow cytometry analysis, 10,000 events were counted and
data were analyzed using the flowJo software.
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7

Whole Blood Leukocyte Isolation Protocol

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Human whole blood was obtained from healthy donors following a protocol approved by the Institutional Review Board (IRB) at the University of Georgia (STUDY00005431). The amount of biotinylated antibodies and magnetic beads required were calculated based on the WBC count. 100 fg per WBC for anti-human CD45 (BioLegend, San Diego, CA) and anti-human CD66b (Life Technologies, Carlsbad, CA) were used. WBCs were labeled with magnetic beads (Dynabeads Myone streptavidin T1, Life Technologies, Carlsbad, CA). Dynabeads were washed twice with 0.01% TWEEN 20 in PBS, then washed with 0.1% BSA in PBS and resuspended in PBS. Whole blood was firstly labeled with antibodies for 30 minutes and lysed by RBC lysis buffer (EBioscience, San Diego, CA) for 7 minutes at room temperature. Cell mixtures were centrifuged for 5 minutes at 800×g and the pellet was suspended in PBS with dynabeads. Cells and Dynabeads were incubated for 25 minutes on the rocker. Ferrofluid and 0.1% (v/v) Pluronic F-68 non-ionic surfactant (Thermo Fisher Scientific, Waltham, MA) were added into the mixture to achieve the same volume with whole blood.
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8

Cytotoxicity Assay for OVCAR3 Cells

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We plated 10,000 OVCAR3 cells per well in a 96-well plate and, after 18 hours, added primary PBMCs. After a 4-hour coincubation, we stained the cells with 7AAD (Invitrogen), annexin V (BioLegend), and anti–human CD45 (304002, BioLegend), then performed a flow cytometry–based cytotoxicity assay as described previously (7 (link)). We stably transfected K562 and K562-FSHR with firefly luciferase. We plated 20,000 K562 and K562-FSHR cells expressing luciferase in a 96-well plate and coincubated them for 5 hours with PBMCs. After the incubation, we lysed the cells and measured luciferase expression using CytoTox Glo (Promega) as previously described (32 (link)). Cytotoxicity was calculated as (maximum viability control – individual well)/(maximum viability control – maximum death control) × 100 as a percentage or relative to the control (PBMCs with mouse IgG2a isotype control C1.18.4).
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9

Multiparametric Flow Cytometry Analysis

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Cells suspended in 100 μL of PBS were incubated with antibodies at 4 °C for 30 min. The samples were measured on BD Fortessa and analyzed by FlowJo software (Tree Star). Antibodies used in our study were listed: anti-Human CD34 (BioLegend, Pacific Blue, clone 581), anti-Human CD34 (BioLegend, PE, clone 581), anti-human CD201 (BioLegend, APC, clone RCR-401), anti-Human CD43 (BioLegend, APC, clone 10G7), anti-Human CD45 (BioLegend, FITC, clone HI30), anti-Human CD90 (BD Pharmingen, APC, clone 5E10), and CD24 (BioLegend, PE, clone ML5).
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10

Identifying Lung Macrophage Subsets

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The MACS CD206+ enriched population of lung resident macrophages were incubated with FcR Block (422302; BioLegend) for 5 min and stained at a dilution of 1:50 with one of two panels of directly conjugated antibodies for 30 min at 4°C: anti-human CD45 (563792; BD), CD204 (371906; BioLegend), CD206 (321132; BioLegend), CD14 (562698; BD Biosciences), CD16 (302028; BioLegend), ACE2 (FAB933P; R&D), HLA-DR (307618; BioLegend), CD11b (393114; BioLegend), CD11c (301644; BioLegend); anti-human CD45 (324016; BioLegend), CD204 (371904; BioLegend), and CD206 (321103; BioLegend). Stained cells were then washed with FACS buffer (2% FBS in PBS) three times, and then incubated with cell viability marker propidium iodide (PI, 1 μg/ml, 421301; BioLegend). Flow cytometry was performed on a FACS Aria II (BD Biosciences).
Living (PI) single, immune (CD45+), and lung resident macrophages (CD206+) were stained for the above panel of cell surface antigens that have previously been suggested to segregate them into AMs and IMs, and that were differentially expressed according to the scRNA-seq transcriptomic profiles obtained from lung slice culture and sorted into CD206+CD204hi and CD206+CD204lo populations. The sorted populations were directly subjected to 10x single-cell mRNA sequencing at BSL2 as described above, which confirmed their molecular identities as AMs and IMs, respectively.
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