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107 protocols using tgf β1

1

MSC Secretome Modulates Myofibroblast Differentiation

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To study the effect of MSC secretome fractions on the induction of myofibroblast differentiation, an in vitro model of TGF-β1-induced differentiation of fibroblasts into myofibroblasts was used. For this, primary human dermal fibroblasts (8–12 passages) were seeded in culture plates in a complete growth medium at a rate of 15,000/cm2. After 24 h, the plates were washed with DMEM LG (Gibco) and left in the second change of DMEM LG for overnight deprivation. After deprivation, appropriate solutions were added to the cells in each group to induce differentiation: negative control—DMEM LG; positive control—DMEM LG + 5 ng/mL TGF-β1 (Cell Signalling, Danvers, MA, USA); EV—DMEM LG + 5 ng/mL TGF-β1 + EV subfraction of MSC secretome; SF—DMEM LG + 5 ng/mL TGF-β1 + SF subfraction of MSC secretome; CM—DMEM LG + 5 ng/mL TGF-β + CM fraction of MSC secretome. After 4 days of incubation, the cells were used for further analysis.
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2

Protein Expression Analysis by SDS-PAGE

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Equal amount of protein was separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to polyvinylidene difluoride (PVDF) membranes. Bovine serum albumin (5%) or skimmed milk was performed to block membranes. Primary antibodies include Fzd2 and CD44 (1:5,000; Abcam); interleukin-6 (IL-6), Stat3, p-Stat3 (Tyr705), non-phospho β-catenin, E-cadherin, vimentin, Slug, Wnt5a/b, Yes-associated protein 1 (Yap1), TGF-β1, Smad3, and ABCG2 (1:1,000; Cell Signaling Technology, Boston, MA, USA); Wnt3, Col1a1, and Col6a1 (1:1,000; Abcam); Zeb1 (1:500; Sigma-Aldrich, St. Louis, MO, USA); and glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (1:500; Proteintech, Chicago, IL, USA) were incubated with the membranes overnight. SuperSignal Chemiluminescent Substrates (Thermo Fisher Scientific) and imaging systems were used to analyze the results.
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3

Regulation of Cell Signaling in Prostate Cancer

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Human PC3 and DU145 cells were obtained from ATCC (Manassas, VA). Cells were maintained in DMEM-G (Hyclone, Logan, UT) with 10% FBS (Atlanta Biologicals, GA), 100 U/ml penicillin, and 100 μg/ml streptomycin in a humidified incubator at 37°C and 5% CO2, and routinely passaged when 80–90% confluent. Antibodies for N-cadherin, TGFβ1, Akt1, pS473Akt, panAkt1 TGFβ-RI and Snail1 were purchased from Cell Signaling (Danvers, MA). Anti-β-actin was purchased from Sigma (St. Louis, MO). Akt inhibitor MK2206 was purchased from Selleckchem (Houston, TX).
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4

Immunofluorescence Analysis of KLF4 and TGF-β1

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CSCs were sorted and grown in serum‐free DMEM/F12 medium in glass‐coverslips for 16 hours before fixed with 2% paraformaldehyde at 37°C for 15 minutes. The fixed cells were then permeabilized with 0.1% Triton X‐100 at the room temperature for 15 minutes followed by incubation at 37°C for 2 hours with primary antibody against KLF4 (Santa Cruz Biotechnology) or TGF‐β1 (Cell Signaling Technology). Cells were then incubated with FITC‐conjugated or APC‐conjugated secondary antibodies (Santa Cruz Biotechnology) at the room temperature for 1 hour and mounted with DAPI (Invitrogen). Images were taken using Olympus FV1200 microscope.
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5

Hepatic Stellate Cell Activation Assay

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HSC-T6 was purchased from Beijing Friendship Hospital (Beijing, China). TGF-β1, LY-364947 [4-[3-(2-pyridinyl)-1H-pyrazol-4-yl]-quinoline HTS 466284 transforming growth factor β Type I receptor kinase inhibitor, molecular formula: C17H12N4, weight: 272.30, and purity: ≥95% (HPLC)], DMSO, and MTT were purchased from Sigma (St. Louis, USA). AST [molecular weight: 248.36386; purity: ≥98%] was purchased from Pure-One Bio Technology (Shanghai, China). Malotilate was purchased from Yabang Epson Pharmaceutical (Jiangsu, China). Kits of ALT, AST, TBil, Alb, MDA, GSH, SOD, COL-I, COL-III, α-SMA, MMP-2, TIMP-2, hydroxyproline, H&E staining, Masson's trichrome staining, Sirius red staining, and Annexin V-FITC/PI double staining were purchased from Jiancheng Bioengineering Institute (Nanjing, China). Antibodies against α-SMA, TGF-β1, TβR-I, Smad 2, p-Smad 2 (S465/467), Smad 3, p-Smad 3 (S423/425), Smad 7, and β-actin were purchased from Cell Signaling Technology (MA, USA). HRP-labeled secondary antibodies were purchased from ZSGB-BIO (Beijing, China). RevertAid™ First Strand cDNA Synthesis Kit and SYBR Green Real-Time PCR Kit were purchased from Thermo Fisher (MA, USA).
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6

Fetal Thymus Development Regulation

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On embryonic day 15.5 (E15.5), fetal thymuses from C57BL/6 mice were removed and cultured on polycarbonate filters (pore size, 0.8 mm; Millipore, USA) in RPMI 1640 medium supplemented with 10% fetal bovine calf serum (HyClone, USA), 1% penicillin and streptomycin (HyClone), and 50 nM 2-mercaptoethanol (Sigma, USA) in the presence or absence of mouse IL-4 (10 ng/ml; PeproTech, USA) and/or TGF-β1 (15 ng/ml; Cell Signaling, USA). Where appropriate, 1 μM SB431542 (selective inhibitor of TGF-β type 1 receptor kinases) or 10 μg/ml neutralizing antibody to TGf-β (1D11; R&D Systems, USA) was added once in 2 days. After 7 days, the thymuses were harvested and single-cell suspensions were prepared and analyzed for their CD4, CD8, Foxp3, and CD103 expression levels by flow cytometry.
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7

Protein Expression Analysis by Western Blot

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Total proteins were extracted from cells using radioimmunoprecipitation assay (RIPA) lysis buffer (Sigma-Aldrich) and quantified by Bicin Choninic Acid (BCA) protein assay kit (Thermo). The Western blot was performed according to standard procedures. The following antibodies were used: EphA8 (Abcam, USA), TGFβ1, TGFβR1, smad2, smad3 and smad4 (Cell Signaling Technology, Beverly, MA, USA); β-actin (Proteintech, USA) was used as loading control. The blots were incubated with goat anti-rabbit or anti-mouse secondary antibodies (Bioss, Beijing, China). The proteins were visualized using a chemiluminescence method (ECL Plus Western Blotting Detection System; Amersham Biosciences, Foster City, CA, USA). The bands were quantified by ImageJ software.
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8

Molecular Mechanisms of Fibrosis Regulation

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Antibodies to p‐PDGFR‐β, p‐VEGFR2, p‐Src, Src, p‐STAT3, STAT3, p‐Smad3, Smad3, TGF‐β1, p‐NF‐κBp65, p‐Akt, Akt and β‐Actin were purchased from Cell Signaling Technology. TGF‐β1 and antibodies to type I collagen and fibronectin were purchased from Santa Cruz Biotechnology. p‐FGFR1 antibody was purchased from Life Span Biosciences. NF‐κBp65 antibody was purchased from Prosci Inc. Antibodies to CD68, CD31, MMP‐2, TIMP‐2, E‐cadherin, vimentin, Snail, Twist, and MCP‐1, TNF‐α, IL‐1β and IL‐6 ELISA assay kits were purchased from Abcam Inc. Nintedanib was purchased from Cayman. α‐SMA antibody, CG, Cell Counting Kit‐8 (CCK‐8) proliferation assay kit and all other chemicals were purchased from Sigma.
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9

Investigating AHNAK2 Role in Lung Cancer

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The lung adenocarcinoma cell lines were transfected with si-NC and si-AHNAK2-1 and −2 for 24 h, and 3 μM of inhibitor of Smad3 phosphorylation, SIS3 (Selleck Chemicals, Houston, USA), was added to the wells and incubated for 6 h. Likewise, 5 ng/mL TGF-β1 (Cell Signaling Technology, Danvers, MA, USA) was added to low-serum DMEM (containing 1% FBS) for the indicated periods. The control groups were also incubated in low-serum medium.
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10

Molecular markers in EMT signaling

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Antibodies against CXCR7 (ABcam; ab38089), GAPDH (Santa Cruz Biotechnology, Dallas, TX, USA; sc-25778), E-cadherin (Cell Signaling Technology, Danvers, MA, USA; 3195), Ep-CAM (Santa Cruz Biotechnology; sc-25308), N-cadherin (Cell Signaling Technology; 13116), α-smooth muscle actin (Sigma Aldrich, St. Louis, MO, USA; A5228), Slug (Cell Signaling Technology; 9585), Twist (Santa Cruz Biotechnology; sc-81417), Vimentin (Cell Signaling Technology; 3932), phosphorylated-AKT at Ser473 (Cell Signaling Technology; 9271), AKT (Cell Signaling Technology; 9272), phosphorylated-ERK1/2 (Cell Signaling Technology; 9101), ERK1/2 (Cell Signaling Technology; 9102), phosphorylated-JNK (Cell Signaling Technology; 4668), JNK (Cell Signaling Technology; 9251), phosphorylated-p38 (Cell Signaling Technology; 9211), p38 (Cell Signaling Technology; 9212), TGF-β1 (Cell Signaling Technology; 3711), phosphorylated-Smad2/3 (Cell Signaling Technology; 8828), Smad2/3 (Cell Signaling Technology; 8685), MMP2 (ABcam; ab37150), and MMP9 (ABcam; ab38898) were used in Western blotting and immunofluorescence. Small interfering (si) RNAs for controls, CXCR7, and Smad2/3 were purchased from Santa Cruz Biotechnology and Thermo Fisher Scientific (St. Louis, MO, USA). For inhibition of protein kinases, LY294002 and wortmannin were purchased from Sigma Aldrich.
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