The largest database of trusted experimental protocols

Vybrant dio dye

Manufactured by Thermo Fisher Scientific
Sourced in United States

Vybrant DiO dye is a fluorescent stain used for labeling cell membranes. It is a lipophilic dye that can passively diffuse into the lipid bilayer of cell membranes, providing a reliable way to visualize and track cells in various applications.

Automatically generated - may contain errors

4 protocols using vybrant dio dye

1

Exosome Uptake by Mammary Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
ECFC-exosomes were labelled with Vybrant DiO dye (Molecular Probes, Carlsbad, CA, USA) according to the manufacturer's instructions. The labelled exosomes (8 μl) were incubated with HMECs at 37 °C for 2 h. HMECs were washed with PBS, fixed in 4% paraformaldehyde for 15 min, and stained with DAPI for 5 min at room temperature. After washing, the cells were analysed using a fluorescence microscope (Leica DMI6000B, Solms, Germany).
+ Open protocol
+ Expand
2

EPC-derived Exosome Uptake by HMECs

Check if the same lab product or an alternative is used in the 5 most similar protocols
EPCs were labeled with Vybrant DiO dye (Molecular Probes, Carlsbad, CA, USA) according to the manufacturer's instructions. Briefly, cells were trypsinized and resuspended in 1 mL of serum-free EGM-2MV media. 5 µL of the cell-labeling solution was added to the cells, followed by incubation at 37 ℃, 5% CO2 for 15 min. The cell-labeled suspension was centrifuged at 300 × g for 15 min and the supernatant was discarded. Cells were washed with PBS and cultured for an additional 24 hours. Subsequently, the exosomes were isolated and purified from the EPCs-derived culture medium, and then incubated with HMECs at 37 ℃ for 2 hours. HMECs were washed with PBS, fixed with 4% paraformaldehyde for 15 min, and stained with DAPI for 5 min at room temperature. After washing, cells were analyzed with a fluorescence microscope (Leica DMI6000B, Solms, Germany).
+ Open protocol
+ Expand
3

Photodynamic Therapy for Cancer Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
3T3, 3T3-FAP, and PDAC299 cells were grown to 80% confluency in 96-well plates and incubated with DTPA-700DX-MB in binding buffer (DMEM with 0.5% w/v BSA, BB) or with BB alone at 37 °C in a humidified atmosphere with 5% CO2 for 2.5 h. After washing with PBS, regular culture medium was added. The cells were then exposed to 0 or 60 J/cm2 690 nm light at a fluency rate of 200 mW/cm2. Cell viability was measured 24 h after tPDT using the CellTiter-Glo assay (Promega, Madison, WI, USA). Furthermore, 3T3-FAP cells were labelled with Vybrant DiO dye according to manufacturer’s protocol (Thermo Fisher Scientific, Waltham, MA, USA) and cocultured with PDAC299 tumour cells in Costar 96-well flat-bottom, clear plates in DMEM with 10% FCS. Cells were incubated with 3 nM DTPA-700DX-MB for 2 h at 37 °C, and upon washing, the plate was irradiated with 60 J/cm2 690 nm light. After 24 h, the cells were incubated with 1 µg/mL propidium iodide (PI) in PBS. After washing twice with PBS, cells were imaged with the EVOS FL cell imaging system with the suitable LED cubes (PI = RFP; DiO = GFP).
+ Open protocol
+ Expand
4

Quantitative Vesicle Transfer Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
The number of vesicles transferred was quantitated using a vesicle transfer assay.20 (link),41 (link) Briefly, one flask of confluent TM cells was trypsinized, and half was labeled with Vybrant DiO dye (488 nm), while the other half was labeled with DiD dye (647 nm; ThermoFisher). After washing, fluorescently labeled cells were mixed 1:1, plated at 1 × 105 cells/mL, and incubated overnight. For NTM/GTM coculture assays, NTM (n = 5) cells were labeled with DiO and incubated with DiD-labeled GTM (n = 6) cells. Cells were then fixed and immunostained with CD44 monoclonal antibody and imaged by confocal microscopy. The total number of DiO (green) and DiD (red) cells were counted in each image. In addition, the number of TM cells containing at least five vesicles of the opposite color “transferred vesicles” was counted. For GTM/NTM cocultures, the percentage of green NTM cells containing red GTM-derived vesicles was calculated, and vice versa.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!