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37 protocols using atcc htb 37

1

Investigating Inflammatory Responses in Caco-2 and THP-1 Cells

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Caco-2 human epithelial colorectal adenocarcinoma cells (ATCC® HTB-37) and human THP-1 monocytes (ATCC® TIB-202™) were purchased from ATCC (Manassas, VA, USA). High glucose Dulbecco’s Modified Eagle Medium (DMEM), Hanks’ Balanced Salt Saline (HBSS), non-essential amino acids (NEAA), L-glutamine, penicillin–streptomycin mix and CellTiter 96® Aqueous One Solution Cell Proliferation Assay (MTS) were purchased from Promega (Madison, WI, USA). Caco-2 human colon adenocarcinoma cell line (ATCC® HTB-37™), LNCaP androgen-sensitive human prostate adenocarcinoma cell line (ATCC® CRL-1740™) and THP-1 (ATCC® TIB-202™) were purchased from ATCC (Manassas, VA, USA). Roswell Park Memorial Institute (RPMI) 1640 Medium, lipopolysaccharide (LPS), diclofenac, were purchased from Sigma-Aldrich (St Louis, MO, USA). Fetal bovine serum (FBS) was purchased from Euroclone (Milan, Italy). Interleukin 1β (IL-1β) ELISA kit was purchased from R and D Systems (Minneapolis, MN, USA). Proinflammatory cytokine-specific array was purchased from Ray Biotech (Peachtree Corners, GA, USA).
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2

Antimicrobial and Cytotoxicity Evaluation

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Ethanol, methanol, acetone, acetonitrile, Mueller Hinton broth (MHB), Mueller Hinton agar (MHA), Tryptone soy broth (TSB), Tryptone soy agar (TSA), Sabouraud dextrose broth (SDB), Sabouraud dextrose agar (SDA), Bovine serum albumin (BSA), Phosphate Buffer Saline (PBS), Triton-X 100, p-iodonitrotetrazolium chloride (INT), Thiazolyl Blue Tetrazolium Bromide (MTT), Amphotericin B, ciprofloxacin and Dimethyl sulphoxide (DMSO) were purchased from Sigma Aldrich, South Africa. Gentamicin was purchased from Virbac, New Zealand, Silica gel 60 from Merck, Germany, Minimal essential medium (MEM), Dulbecco’s Modified Eagle’s Medium (DMEM) and foetal calf serum (FCS) from Highveld Biological, South Africa. Cell lines C3A human hepatocyte (ATCC No. CRL-10741) and human colon (Caucasian colon adenocarcinoma (Caco2)) (ATCC HTB 37) were purchased from America Type Culture Collection, while Vero African green Monkey kidney cells was obtained from the collection of the Department of Veterinary Tropical Diseases, University of Pretoria.
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3

Culturing Colorectal and Tongue Cancer Cells

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Colorectal adenocarcinoma epithelial cells (Caco-2, ATCC HTB-37) and tongue squamous cell carcinoma (Cal27, ATCC CRL-2095) were obtained from American Type Culture Collection (https://www.atcc.org/) (accessed on 5 March 2020) and cultured according to the guidelines provided by the organization.
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4

Culturing Caco-2 Intestinal Epithelial Cells

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Human intestinal epithelial Caco-2 cells (ATCC HTB-37) were purchased from (ATCC, Manassas, VA) and cultured in Dulbecco's Modified Eagle's Medium (ATCC, Manassas, VA), with 10% fetal bovine serum (Gibco, Life Technologies, Grand Island, NY), 1% none-essential amino acids (ATCC, Manassas, VA) and 100 U penicillin/streptomycin (Invitrogen, Life Technologies, Grand Island, NY). Cells were maintained at a concentration of 3×104 cell/mL and passaged twice a week. At the passage proceeding microfluidic cell culturing, cells were seeded at 1×104 cells/mL. Caco-2 cells were used in experimental cultures at passage number 15-30.
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5

Bacterial and Fungal Strain Characterization

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The bacterial and fungal strains (S2 Table in S1 File) used in this study were clinical isolates obtained from the American Type Culture Collection (ATCC, Manassas, VA, USA), the Centers for Disease Control and Prevention (CDC) and Biodefense and Emerging Infections Research Resources Repository (BEI Resources) (Manassas, VA, USA). RPMI 1640 (Thermo Fisher Scientific, Waltham, MA), YPD broth, YPD agar, cation adjusted Mueller-Hinton broth, brain heart infusion broth, and lactobacilli MRS broth (Becton, Dickinson and Company, Franklin Lakes, NJ) were purchased from commercial vendors. Phosphate buffered saline was purchased from Fisher Scientific (Waltham, MA). Yeast extract, L-cysteine, vitamin K, 3-(N-Morpholino)propanesulfonic acid (MOPS) and hemin were obtained from Sigma-Aldrich (St. Louis, MO). Human colorectal adenocarcinoma epithelial cells (Caco-2) (ATCC HTB-37), and monkey kidney epithelial cells (Vero) (ATCC CCL-81-VHG) were obtained from the American Type Culture Collection (ATCC) (Manassas, VA, USA).
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6

Comparative SARS-CoV-2, SARS-CoV, MERS-CoV, and Influenza Infection

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Primary human alveolar epithelial cells (AECs) and peripheral blood monocyte-derived macrophages were isolated from three donors and used for infection, as previously described,9 and human colorectal carcinoma cells (Caco-2; ATCC HTB-37) purchased from American Type Culture Collection were cultured in MEM with 10% FCS. AECs, macrophages, and Caco-2 cells were infected with SARS-CoV-2, SARS-CoV, MERS-CoV, H1N1pdm, and H5N1 viruses, either at a multiplicity of infection (MOI) of 0·1 for viral replication kinetics, or at an MOI of 2 for the analysis of cytokines (TNF-α and interleukin 6 [IL-6]), chemokines (IP-10, regulated on activation, normal T cell expressed and secreted [RANTES], and MCP-1), and angiotensin-converting enzyme 2 (ACE2) expression. Mock-infected cells served as negative controls. Viral titres in supernatant were determined by TCID50 assay. Cell lysates were collected at 24 hpi or 48 hpi, or both, for mRNA expression of SARS-CoV ORF1b,10 (link) MERS-CoV UpE,7 (link) influenza matrix gene, cytokines, chemokines, and ACE2 using rtPCR. Methods of culture, infection, and analysis are detailed in the appendix (pp 1–3).
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7

Prostate and Colorectal Cancer Cell Assays

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High-glucose Dulbecco’s Modified Eagle Medium (DMEM), Roswell Park Memorial Institute (RPMI) 1640 Medium, Hanks’ Balanced Salt Saline (HBSS), non-essential amino acids (NEAA), L-glutamine, Penicillin–Streptomycin mix, lipopolysaccharide (LPS), Diclofenac, dihydrotestosterone (DHT), staurosporine (STS) and phorbol 12-myristate 13-acetate (PMA) were purchased from Sigma-Aldrich (St Louis, MO, USA). LNCaP androgen-sensitive human prostate adenocarcinoma cell line (ATCC® CRL-1740™), Caco-2 human colorectal adenocarcinoma cells (ATCC® HTB-37™) and THP-1 (ATCC® TIB-202™) were purchased from ATCC (Manassas, VA, USA). CellTiter 96® AQueous One Solution Cell Proliferation Assay (MTS) and Apo-ONE® Homogeneous Caspase-3/7 Assay were purchased from Promega (Madison, WI, USA). Oxygen Radical Antioxidant Capacity (ORAC) Assay kit was purchased from Cell Biolabs (San Diego, CA, USA). Transwell® inserts were purchased from Millipore (Burlington, MA, USA). Fetal bovine serum (FBS) was purchased from Euroclone (Milan, Italy). Interleukin 1β (IL-1β), Tumor Necrosis Factor α (TNF-α), PSA and DHT ELISA kit were purchased from R&D Systems, PeproTech (London, UK), Abcam (Cambridge, UK), and Cloud Clone (Katy, TX, USA), respectively.
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8

In Vitro Diosgenin Bioactivity Assay

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All the chemicals, including diosgenin, and the reagents were purchased from Sigma Chemical (St. Louis, MO, USA) unless otherwise stated. The reagents for cell culture and bacterial culture were purchased from GE Healthcare Life Sciences (Marlborough, MA, USA) and BD Diagnostics (Sparks Glencoe, MD, USA), respectively. The ELISA reagents and standard were purchased from eBioscience, Inc. (San Diego, CA, USA), while 10% neutral buffered formalin was purchased from Leica Biosystems Richmond Inc. (Richmond, IL, USA). The Caco-2 cell line (ATCC® HTB-37™) was maintained in DMEM (L-glutamine, high glucose; Corning Inc., New York, NY, USA) supplemented with 10% fetal bovine serum.
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9

Culturing Common Cancer Cell Lines

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Human connective tissue fibrosarcoma (HT-1080, ATCC® CCL-121), human colon adenocarcinoma (CaCo-2, ATCC® HTB-37), human breast adenocarcinoma (MDA-MB-231, ATCC® HTB-26) and human breast adenocarcinoma (MCF-7, ATCC® HTB-22) cell lines were obtained from the American Type Culture Collection (ATCC, Manassas, VA). Cells were cultured in Dulbecco’s Modified Eagle’s Medium (DMEM), supplemented with 10% or 20% fetal bovine serum for CaCo-2. The cultures were cultivated at 37 °C with 5% CO2, 95% air and complete humidity. All cell lines were regularly tested for Mycoplasma contamination.
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10

Cytotoxicity Assessment of VAL and 4-HBA in Caco-2 Cells

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VAL and 4-HBA cytotoxicity was assessed by 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide (MTT) assay on colorectal adenocarcinoma cell line Caco-2 (ATCC® HTB-37™, ATCC, Manassas, VA, USA). Compounds’ stock solutions were prepared in dimethyl sulfoxide (DMSO), diluted in complete medium (Dulbecco’s modified Eagle’s medium supplemented with 10% fetal bovine serum, 2 mM L-glutamine, and 1 mM sodium pyruvate) and filtered on 0.22 µm filters. The concentrations tested were 245, 100, 30, 10 µM for VAL and 36, 18, 3.5, 1 µM for 4-HBA. DMSO 0.1% (the highest concentration in the dilutions) was added as control. Briefly, 1 × 104 Caco-2 cells/well were seeded in a 96-well plate and treated with serial dilutions of VAL and 4-HBA for 24 h. The MTT solution (0.5 mg/mL) was then added to each well and incubated for 3–4 h. Formazan crystals were solubilized with 100 µL/well of lysis buffer (8 mM HCl and 0.5% NP-40 in DMSO) and the absorbance measured at 575 nm in a microplate reader (Power Wave HT, Biotek, Bad Friedrichshall, Germany). The cell viability was calculated by the following formula: % Cell viability=(absorbance sample÷absorbance control)×100
Three independent experiments were performed with four technical replicates for each condition.
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