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Apaf 1

Manufactured by R&D Systems
Sourced in United States

Apaf-1 is a protein that plays a central role in the intrinsic apoptosis pathway. It functions as an activator of caspase-9, which in turn activates other caspase enzymes, leading to programmed cell death. Apaf-1 is a key component of the apoptosome, a multiprotein complex that initiates the caspase cascade in response to cellular stress or damage.

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3 protocols using apaf 1

1

Western Blot Analysis of Apoptosis Markers

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Insulinoma cells and primary islets were harvested and lysed in ice-cold RIPA buffer containing protease inhibitors (BD biosciences). Clarified cell lysates were resolved on 4–12% NuPAGE gels (Invitrogen) and transferred to polyvinylidene difluoride (PVDF) membranes. Membranes were probed with antibodies raised against the following proteins: Apaf-1 (R&D Systems Cat# MAB868), caspase 3 (Cell Signaling Technology Cat# 9662), human caspase 9 (Cell Signaling Technology Cat# 9502, RRID:AB_2068621), CHOP (Cell Signaling Technology Cat#2895), LC3B (Cell Signaling Technology Cat#2775), PARP (Cell Signaling Technology Cat# 9542, RRID:AB_2160739), XIAP (R&D Systems Cat#AF8221), and γ-tubulin (Sigma-Aldrich Cat# T6557, RRID:AB_477584). Primary antibodies were detected using goat anti-mouse IRDye 800CW (Li-COR) or Alexa Fluor 680 goat anti-rabbit IgG (Thermo Life Technologies) secondary antibodies. Immunoblots were developed using an Odyssey CLx system (Li-COR).
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2

Western Blot Analysis of Apoptosis Markers

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Tissue lysates containing the same amount of protein (25 μg) for each experimental condition were loaded on a 12% sodium dodecyl sulfate polyacrylamide gel electrophoresis gel. Electrophoresis was run at 20 mA/gel and separated proteins were subsequently blotted on polyvinylidene fluoride membranes at 100 V for 90 minutes on ice. After overnight blocking with nonfat dry milk (5%), membranes were incubated for 1 hour with primary antibodies: APAF-1 (1 μg/mL; R&D Systems, Inc.), cathepsin B (1 μg/mL; Leica Microsystems), and β-actin (1 μg/mL; Santa Cruz Biotechnology Inc., Dallas, TX, USA). After a 1-hour incubation period in suitable secondary antibody (goat antimouse, 1:10,000 dilution; Santa Cruz Biotechnology Inc.), membranes were incubated for 3 minutes in ECL solution (Thermo Fisher Scientific, Waltham, MA, USA) and exposed to film.
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3

Western Blot Analysis of Signaling Proteins

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Protein expression levels of sFRP4 (Invitrogen), β-catenin (BioLegend), GSK-3β (Cell Signaling Technology), and APAF1 (R&D Systems, Minneapolis, MN, USA) were analyzed by Western blotting as previously described by Warrier et al. [12 (link)].
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