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Whole transcriptome amplification

Manufactured by Takara Bio
Sourced in China

Whole transcriptome amplification is a laboratory technique that enables the amplification of the entire population of RNA transcripts present in a biological sample. This process generates a comprehensive representation of the transcriptome, providing a valuable tool for researchers to study gene expression patterns and dynamics.

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2 protocols using whole transcriptome amplification

1

Wnt Signaling Pathway in Oocytes

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We collected oocytes 8 hours (just before insemination) after injection with miR-320 inhibitor (n = 80) or NC inhibitor (n = 50) and measured the expression levels of 13 genes (Apc, Aspm, Btrc, Csnk1a1, Ctnna1, Ctnnb1, Dvl3, Gsk3b, Lef1, Lrp6, Numb, Tcf7 and Wnt7a) within or regulate Wnt signaling pathway by qRT-PCR. Prior to the PCR, whole transcriptome amplification (TaKaRa, Dalian, China) was performed due to the limited quantity of RNA in the small numbers of oocytes. Experiments were performed in triplicate.
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2

Investigating miR-451 Regulation of WNT Signaling in Oocytes

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We collected the human and mouse oocytes 8 h (just before insemination) after injection with the miR-451 inhibitor (human oocytes: n = 21; mouse oocytes: n = 160) or the NC inhibitor (human oocytes: n = 20; mouse oocytes: n = 95). The miRNeasy Micro Kit (QIAGEN) was used for isolation and purification of RNA from oocytes according to the manufacturer’s protocol [14 (link)]. The expression levels of 12 target genes (WNT4, AXIN1, COX2, CDX2, CTNNB1, WNT5A, WNT3, WNT8B, CCND1, c-MYC, ATP2, and MMP9) within or regulating the WNT signalling pathway were measured by qRT-PCR in human/mouse oocytes and in 2-cell and blastocyst-stage embryos. The measurements were then compared between the miR-451 inhibitor-injected and control groups. Prior to PCR, whole transcriptome amplification (TaKaRa, Dalian, China) was performed because the quantity of RNA was limited due to the small number of oocytes. qRT-PCR reactions were performed in triplicate for each sample.
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