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5 protocols using sirt1

1

Protein Extraction and Western Blot Analysis

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Total proteins from tissues and cells were harvested, washed, and lysed in radioimmunoprecipitation buffer (RIPA) buffer. The protein concentration of each purified exosome sample was determined using a bicinchoninic acid (BCA) protein assay kit (CWBIO). Equal amounts of tissue or cell lysates were separated by 12% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred onto polyvinylidene fluoride (PVDF) membranes. After being blocked with 5% skim milk for 1 h, the membranes were incubated with primary antibodies and horseradish peroxidase (HRP)-conjugated secondary antibodies and detected using an enhanced chemiluminescent (ECL) substrate detection system. The primary antibodies used in the experiments were as follows: CD9 (1:500, Bioworld Technology, USA), CD63 (1:500, Bioworld Technology, USA), Bax (1:500, Bioworld Technology, USA), Bcl2 (1:500, Bioworld Technology, USA), SIRT1 (1:500, Bioworld Technology, USA), PCNA (1:500, CST, USA), 14-3-3ζ (1:500, Bioworld Technology, USA), TNF-α (1:500, Bioworld Technology, USA), Cleaved caspase3 (1:400, Bioworld, USA) GAPDH (1:2000, CWBIO, China), β-actin (1:2000, CWBIO, China). Primary antibodies were incubated overnight at 4° C. The HRP-conjugated goat anti-rabbit and goat anti-mouse secondary antibodies (1:2000, CWBIO, China) were incubated 2 hours at 37° C.
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2

Antioxidant Mechanisms in Diabetic Nephropathy

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DMEM and fetal bovine serum (FBS) were purchased from Life Technologies (Grand Island, NY, United States). PA used for cell treatment was purchased from National Institutes for Food and Drug Control (Guangzhou, China). PA used in animal trial was from Zelang (purity > 98.0%, HPLC; Nanjing, China). Metformin Hydrochloride Tablets used in animal experiments were purchased from Bristol-Myers Squibb Company (Shanghai, China). DMSO and STZ were purchased from Sigma-Aldrich (St. Louis, MO, United States). Primary antibodies against FN (catalog: sc-18825) and ICAM-1 (catalog: sc-1511) were from Santa Cruz Biotechnology (Dallas, TX, United States); Antibodies against Nrf2 (catalog: 16396-1-AP) and SOD-1 (catalog: 10269-1-AP) were purchased from Proteintech Group (Wuhan, China); Sirt1 (catalog: BS6494) was from Bioworld Technology (St. Paul, MN, United States); HO-1 (catalog: A1346) was from Abclonal Technology (Baltimore Avenue, United States); Lamin B1 (catalog: ab-133741) was from Abcam (Cambridge, MA, United States); Anti-rabbit and anti-goat secondary antibodies were purchased from Beyotime (Haimen, China); Alexa Fluor® 488 goat anti-rabbit IgG (catalog: A-11008) was purchased from Molecular Probes (Eugene, OR, United States).
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3

Protein Expression and Western Blot Analysis

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After adding 200 μL of the lysate to the 6-well plate, it was allowed to stand for 20 minutes on ice, and the liquid was collected and centrifuged (13,000 rpm, 15 min); then, the supernatant was collected. The concentration of the protein was determined by the bicinchoninic acid (BCA) (Camilo Biological, Nanjing, China) method and quantified. The protein was separated using a 10% sodium dodecyl sulfate-polyacrylamide gel, then transferred to a polyvinylidene fluoride (PVDF) membrane (Millipore, Billerica, MA, USA) for 2 hours at 4°C. 5% skim milk was prepared with Tris-buffered saline with Tween-20 (TBST) to block the specific antigen for 2 hours. After washing with TBST for 1 minute, PVDF membranes were incubated with a specific primary antibody (SOD1, Abcam, Rabbit; 1 : 3000; SOD2, Abcam, Rabbit, 1 : 3000; GPX1, US 1 : 1000, CST; GPX3, US 1 : 1000, CST; Bcl-2, Abcam, Rabbit, 1 : 2000; Bax, Abcam, Rabbit, 1 : 500; Sirt1, Bioworld, mouse, 1 : 500, China; P53, Abcam, Rabbit, 1 : 2000; ROCK1, Abcam, Rabbit, 1 : 500; ROCK2, Abcam, Rabbit, 1 : 1000; MYPT-1, Abcam, Rabbit, 1 : 1000; GAPDH US 1 : 1000 CST) at 4°C overnight. The next day, TBST was washed for 30 minutes. Specific proteins were detected by secondary antibodies and observed by the electrochemiluminescence (ECL) (Pierce, Rockford, IL, USA) system.
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4

Hippocampal Protein Expression Profiling

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The protein was extracted from hippocampus tissues using RIPA lysis buffer (1:100; Beyotime, Shanghai, China). Equal amounts of protein were separated using the SDS–polyacrylamide gel (SDS–PAGE) gel preparation kit (Solarbio). Electrophoresis was carried out on SDS–PAGE using 20 μg of total protein in each lane. After electrophoresis, the protein was transferred to a PVDF membrane. Then, the membrane was incubated with corresponding primary antibodies (Sirt1, 1:2000; Bioworld; PI3K, 1:1000; Bioss; AKT, 1:2000; Cell Signaling; p‐AKT, 1:1000; Cell Signaling; Gabarapl1, 1:1000; Bioss; FoxO1, 1:1000; Bioss; ATG12, 1:1000; Abcam; acetyl‐FoxO1, 1:2000; Thermo Fisher; p‐FoxO1, 1:1000; Bioss; GAPDH, 1:2000; Zsbio; LaminB1, 1:1000; Bioss) at 4°C overnight and the secondary antibody (1:20,000; Abcam) for 1 h, respectively. Eventually, the targeted antigens were detected by standard chemical luminescence methods. Band intensities were measured with Image software. During the experiments, we first detected the protein expression levels of Sirt1, PI3K, AKT, p‐AKT, FoxO1, ATG12, acetyl‐FoxO1, p‐FoxO1, and Gabarapl1 and then detected the protein expression levels of p‐FoxO1 in the cytoplasm and FoxO1 in the nucleus.
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5

Protein Extraction and Western Blot Analysis

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Proteins were extracted from C18-4 cells which were treated with various doses of Res for 24 h. Cells were collected and lysed with lysis buffer, and then the protein concentration was detected using the BCA Protein Quantification Kit (Vazyme, Piscataway, NJ, USA). After heat denaturation in 5% SDS–PAGE sample loading buffer, the protein samples were resolved by SDS-PAGE and transferred to a PVDF membrane [55 (link)–56 (link)]. The samples were probed with β-ACTIN (1:1000; Sino Biological Inc., Shanghai, China), GAPDH (1:1000; Sino Biological Inc.), p53 (1:1000; Bioss, Beijing, China), Ac-p53 (1:1000; Cell Signaling Tecnology, Inc., USA), FOXO1 (1:500; Bioworld, Nnjing, China), Ac-FOXO1 (1:500; Cell Signaling Tecnology), BCL2 (1:500; Bioss), P38 (1:500; Sangon Biotech, Shanghai, China), SIRT1 (1:1000; Bioworld) as previously described [24 (link)]. The secondary antibody was horseradish peroxidase-conjugated anti-rabbit/mouse IgG (1:1,000; Boster, Wuhan, China). Protein blots were probed with the indicated primary antibodies and appropriate secondary antibodies and protein bands were visualized using the Thermo Scientific Pierce ECL western blotting substrate, and the results were analyzed using a Tanon-410 automatic gel imaging system.
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