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17 protocols using anti mouse ifn γ

1

RSV-Specific T Cell Responses

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Eight days following RSV infection, CD4+ T cells and CD8+ T cells were isolated from the mouse spleens using anti-CD4 micro beads or anti-CD8 micro beads (Miltenyi Biotec, Auburn, CA, USA) in accordance with the manufacturer's instructions. CD4+ T and CD8+ T cells (2×105) were re-stimulated with heat-inactivated RSV or RSV M197-195 peptide, pulsed with irradiated APCs (3×105), and cultured for 72 hr at 37℃ in 96-well U-bottom plates (BD falcon, Durham, NC, USA). IFN-γ production in the supernatants was measured by ELISA with anti-mouse IFN-γ (eBioscience, XMG1.2) as the capture antibody and biotin-labeled anti-mouse IFN-γ (eBioscience, R4-6A2) as the secondary antibody.
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2

Comprehensive Immune Cell Profiling

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The following antibodies were used for the present study.
Anti-mouse CD3, clone number 17A2, BioLegend, 05112-40-100, V450;
Anti-mouse CD4, clone number GK1.5, BioLegend, 100434, PerCP/Cyanine5.5;
Anti-mouse CD8, clone number 53-6.7, BioLegend, 100714, APC/Cyanine7;
Anti-mouse CD25, clone number 3C7, BioLegend, 101908, FITC;
Anti-mouse CD69, clone number H1.2F3, BioLegend, 104508, PE;
Anti-mouse CTLA-4, clone number UC10-489, BioLegend, 106305, PE;
Anti-mouse PD-1, clone number 29F.1A12, BioLegend, 135210, APC;
Anti-mouse CD19, clone number 1D3, eBioscience, 12-0193-82, PE;
Anti-mouse CD45, clone number 30F11, BioLegend, 103122, Alexa Fluor 488;
Anti-human CD45, clone number HI30, BioLegend, 304025, PerCP;
Anti-mouse IFNγ, clone number XMG1.2, eBioscience, PE;
Anti-mouse IL-17A, clone number TC11-18H10.1, BioLegend, Alexa Fluor 647;
Anti-mouse IL-13, clone number 13A, BioLegend, PE/Cyanine7;
Anti-mouse Foxp3, clone number MF14, BioLegend, PE;
Anti-mouse TNFα, clone number MP6-XT22, BioLegend, Alexa Fluor 488;
Purified Anti-mouse IFNγ antibody, clone number XMG1.2;
Purified anti-mouse IL-4 antibody, clone number 11B11.
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3

Cytokine and Antibody Protocols for in vitro Experiments

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All recombinant cytokines in in vitro experiments were obtained from Peprotech (London, UK). The antibodies in this study were purchased from commercial companies. Anti-mouse CD4, anti-mouse IFN-γ, anti-mouse CD25, anti-mouse Foxp3, anti-mouse CD11c, anti-mouse CD80, anti-mouse CD86, anti-mouse MHC-II, anti-mouse CD103, anti-human CD4, anti-human IFN-γ, anti-human CD25, anti-human Foxp3, anti-human CD11c, anti-human CD80, anti-human CD86, anti-human CD83, and anti-human CD103 were obtained from ebioscience (CA, USA). Anti-mouse IDO and anti-human IDO were purchased from Biolegend (CA, USA) and R&D (MN, USA), respectively.
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4

In vitro Naive CD4+ T cell Polarization

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Naïve CD4+ T cells were sorted from the spleens and lymph nodes with the MACS CD4+CD62L+ T Cell Isolation (30–093-227) Kit (Miltenyi Biotec, Bergisch Gladbach, Germany). Cells were cultured under neutral (TH0) conditions in supplemented IMDM medium in the presence of activating antibodies (5 μg/ml plate-coated anti-CD3 and 1 μg/ml soluble anti-CD28) and iTreg polarizing cytokines: TGF-β [5 ng/ml], human IL-2 [20 ng/ml], αIL-4 [2 μg/ml], αIFN-γ [2 μg/ml] and αIL-12 [2 μg/ml].
Recombinant proteins (recombinant human IL-2 and TGF-β) and blocking antibodies (anti-mouse IL-4, anti-mouse IFN-γ, anti-mouse IL-12) for in vitro cell differentiation were purchased from eBioscience (San Diego, California,USA).
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5

Measuring T-Cell Cytokine Responses

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A total of 5 × 105 rhIL-2–rested TILs in 1 mL RPMI with 10% FBS was incubated at a 1:1 ratio with autologous PBMCs loaded with one of the peptide pool or single peptide (final concentration 5 μg/mL). For mouse experiments, 1 × 106 splenocytes from vaccinated mice were incubated with peptide pool or single peptide at 5 μg/mL. A total of 0.7 μL/mL of GolgiPlug (BD Biosciences, 555029) was added to the cultures, and incubation was allowed to proceed at 37°C for 12–16 hours. Cells were washed, stained with surface antibodies, fixed and permeabilized with transcription factor staining buffer set (Invitrogen, 00-5523-00), and incubated with anti–hIFN-γ (eBioscience; clone 4S.B3, 12-7319-42) or anti–mouse IFN-γ (eBioscience; clone XMG1.2, 48-7311-82). Cells were analyzed on a FACSCanto flow cytometer using FlowJo software (Tree Star Inc.).
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6

Flow cytometric analysis of T cell subsets

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Cells surface markers and intracellular cytokines were stained according to the eBioscience flow cytometry protocol. Briefly, for surface staining of CD3, CD4, and CD25, cells were resuspended in PBS containing 0.5% BSA and were incubated on ice for 30 min with fluorochrome-conjugated antibodies (eBioscience). After fixation and permeabilization, cells were stained, respectively, with anti-mouse IL-17A, anti-mouse IFN-γ, and anti-mouse Foxp3 antibodies conjugated with fluorochrome (eBioscience). Finally, stained cells were fixed with 4% paraformaldehyde and analyzed on a BD Caliber flow cytometer.
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7

Antibody Panel for Immune Profiling

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The antibodies used in this study are as follows: anti-mouse CD30 (clone: mCD30.1) (BD Biosciences, San Jose, CA, USA), anti-mouse CD8α (clone: 53-6.7) (eBioscience, San Diego, CA, USA; BioLegend, San Diego, CA, USA), anti-mouse CD4 (clone: GK1.5) (eBioscience, BioLegend), anti-mouse CD3ε (clone: 145-2C11) (eBioscience, BioLegend), anti-mouse CD44 (clone: IM7) (eBioscience), anti-mouse T-bet (clone: 4B10) (eBioscience), anti-mouse Foxp3 (clone: FJK-16s) (eBioscience), anti-mouse Bcl6 (clone: BCL-DWN) (eBioscience), anti-mouse PD-1 (clone: J43) (eBioscience), anti-mouse CXCR5 (clone:SPRCL5) (eBioscience), anti-mouse CD62L (clone: MEL-14) (eBioscience), anti-mouse IFNγ (clone: XMG1.2) (eBioscience), anti-mouse Tim-3 (clone: RMT3-23) (eBioscience), and anti-mouse CD25 (clone: PC61.5) (eBioscience).
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8

Th2 Cell Differentiation from Mouse T Cells

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Single-cell suspensions from BT-II or OT-II mouse lymph nodes were incubated with anti-CD4 MicroBeads isolated on a MACS LS column (Miltenyi Biotec, Singapore). Splenic dendritic cells (DCs) were digested with Liberase Cl (Roche, Switzerland) at 37°C for 30 min and isolated by centrifugation over OptiPrep Density Gradient Medium (Sigma-Aldrich, St Louis, MO), incubated with anti-mouse CD11c MicroBeads, and passed through a MACS LS column (Miltenyi Biotec). BT-II and OT-II CD4 T cells and splenic DCs were cocultured in 48-well plates with 10 μg/ml Blo t 555–70 peptide (IIRELDVVCAMIEGAQ) or OVA323–339, respectively (AnaSpec, Fremont, CA); 20 ng/ml IL-4 (PeproTech, Rocky Hill, NJ)1; 20 μg/ml anti-mouse IFN-γ; 20 μg/ml anti-mouse IL-12/IL-23 p40 (eBioscience, ImmunoCell, Singapore); and 20 μg/ml mouse IFN-γ R1/CD119 Ab (R&D Systems, Minneapolis, MN). Cells were restimulated on days 3, 7, and 11 with Blo t 555–70, cytokines, and neutralizing Abs. Fresh DCs were added on day 7. Th2-polarized BT-II cells were harvested on day 14.
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9

Flow Cytometry Analysis of Immune Cells

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Flow cytometry was performed as previously described (33 ). Briefly, single-cell suspensions were isolated from spleens or lymph nodes by crushing with forceps, or from sciatic nerves by mincing and digestion in 2 mg/ml collagenase. Cells were stained with live/dead fixable yellow dye (Life Technologies), anti-mouse CD4 (Biolegend clone GK1.5), anti-mouse CD44 (eBioscience clone IM7), anti-mouse CD62L (eBioscience clone MEL-14), anti-mouse S1PR1 (R&D clone 713412), anti-mouse IFN-γ (eBioscience clone XMG1.2), and anti-mouse IL-10 (BD clone JES5-16E3) antibodies. For intracellular cytokine staining, cells were stimulated with PMA/ionomycin for 4 hours at 37°C 5% CO2, and permeabilized using BD Cytofix/Cytoperm according to manufacturer’s instructions. Cells were analyzed on a CyAn ADP Analyzer (Beckman Coulter). Data were analyzed using FlowJo X.
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10

Serum Cytokine Analysis by ELISA

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Serum cytokines involved in the immune response, interferon gamma (IFN-γ), interleukin-12β (IL-12β), tumor necrosis factor-alpha (TNF-α), interleukin-2 (IL-2) and interleukin-10 (IL-10), were measured individually from each mouse (four mice per group) by enzyme-linked immunosorbent assay (ELISA) using anti-mouse IFN-γ, IL-12β, TNF-α, IL-2, and IL-10 (eBioscience, Inc., San Diego, CA, USA) following the manufacturer’s instruction.
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