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5 protocols using hescs h9

1

Fibroblast Characterization of Gaucher Disease

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Fibroblasts derived from three patients with GD2 (GM01260, GM02627, GM08760) and one individual heterozygous carrier (GM00878) were from the Coriell Institute for Medical Research (S1 Table) [34 (link)–39 (link)]. Normal human foreskin fibroblasts (HFF10), a generous gift from Dr. Susanne Wells, were from a non-disease donor (control) with a wild-type GBA1 DNA sequence (S1 Fig.) [40 (link)]. Human embryonic stem cells (hESCs) (H9) were from the WiCell Research Institute (Madison, WI) [41 (link)]. The following were from commercial sources: hESC-qualified matrigel (BD Biosciences, San Jose, CA), N2 supplement, DMEM supplemented with 10% fetal bovine serum, and 1x non-essential amino acids (Invitrogen, Grand Island, NY), mTeSR1 (StemCell Technologies, Vancouver, Canada).
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2

Culturing Human Pluripotent Stem Cells

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Human PSCs including hESCs-H9 (H9, provided by WiCell Institute Inc., Madison, WI, USA) and urine-derived iPSCs (UiPSCs, provided by Cellapy: CA1002008, Beijing, China) were cultured in PSCeasy medium (Cellapy, China) on six-well plates (Corning, US) coated with a 1:500 dilution of hESC-matrigel (5 μg/cm2, Corning). Medium was changed every day. PSCs were passaged every 3–4 days at 70–80% confluence with 0.5 mM EDTA (Cellapy). All cells were maintained at 37 °C, 5% CO2 in incubator (Thermo Fisher Scientific, USA).
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3

Directed Differentiation of hESCs

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hESCs (H9, WiCell, Madison) were maintained in a chemically defined medium (CDM-BSA) containing Activin-A (10 ng/ml, R&D Systems) and FGF2 (12 ng/ml, R&D Systems) as previously described (13 (link)). Chemically defined medium consisted of IMDM (250 ml, Life Technologies), Ham’s F12 (250 ml, Life Technologies), Pen/Strep (5 ml, Life Technologies), Insulin (350 μl, Roche), Transferin (250 μl, Roche), chemically defined 100x lipid concentrate (5 ml, Life Technologies) and monothioglycerol (20 μl, Sigma). Differentiation to intermediate lineages and smooth muscle cells was performed as previously described in CDM-PVA, containing polyvinyl alcohol (PVA, 1 mg/ml, Sigma)(14 (link)). In brief, early mesoderm differentiation was started with a combination of CDM-PVA, FGF2 (20 ng/ml), LY294002 (10 μM, Sigma) and BMP4 (10 ng/ml, R&D) for 1.5 days. Consequently either lateral mesoderm differentiation was started in CDM-PVA, FGF2 (20 ng/ml) and BMP4 (50 ng/ml) for 3.5 days or paraxial mesoderm differentiation in CDM-PVA, FGF2 (20 ng/ml) and LY294002 (10 μM) for 3.5 days. To induce neuroectoderm differentiation, cells were cultured in CDM-PVA, FGF (12 ng/ml) and SB431542 (10 μM, Tocris) for 7 days. For smooth muscle cell differentiation, LM-, PM- and NE-cells were resuspended as single cells in CDM-PVA, PDGF-BB (10 ng/ml, Peprotech) and TGF-β1 (2 ng/ml, Peprotech) for 6 days.
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4

hESC Culture and CLEVER-seq Library Prep

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The hESCs (H9) were purchased from WiCell Institute. hESCs were cultured on the hESC-Qualified Matrix (Corning) in a feeder-free condition. And the complete E8 culture medium were used in cell culture. With regular passaging, we collected the colonies of hESCs and digested them into single-cell suspension using Accutase (Sigma) at 37°C for 1 h. Then the single cells of hESCs were used for CLEVER-seq library construction.
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5

Stem Cell Culture Methodology

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HPS0077 cells (hiPSCs, female) were imported from Riken BioResource Center (Tsukuba, Japan). hESCs (H9) were obtained from WiCell Research Institute (Madison, WI, USA). Supplementary Table 1 lists the biomolecules and materials used in this research. The other biomaterials utilized in the research were supplied from Sigma‒Aldrich (St. Louis, MO, USA).
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