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Gcms2010 plus

Manufactured by Shimadzu
Sourced in Japan

The GCMS2010 Plus is a gas chromatograph-mass spectrometer (GC-MS) system manufactured by Shimadzu. It is designed to perform qualitative and quantitative analysis of complex samples by separating and detecting individual chemical components. The core function of the GCMS2010 Plus is to provide accurate and reliable analytical data.

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22 protocols using gcms2010 plus

1

Comprehensive 2D GC-MS Analysis of Complex Mixtures

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Samples were analyzed using 2D GC×GCMS(FID) (first column: ZB-1HT Inferno 30 m, 0.25 mm ID, df 0.25 μm; second column: BPX50, 1 m, 0.15 mm ID, df 0.15 μm) in a GC-MS 2010 Plus (Shimadzu) chromatogram equipped with a ZX1 thermal modulation system (Zoex). The injector temperature was 300°C. The temperature program began at 40°C for 5 min, and subsequently was increased at a rate of 5.2°C min−1 until reaching a temperature of 300°C; the program culminated with an isothermal step at 300°C for 5 min. The modulation applied for the comprehensive GC×GC analysis was a hot jet pulse (400 ms) every 9 s/6 s (before and after HDO). The 2D chromatograms were processed with GC Image software (Zoex). The products were identified according to the matching of the MS spectra with MS libraries NIST 08, NIST 08s, and Wiley 9. Semi-quantification of the products was performed using integration of GC peaks using Effective Carbon Number concept (ECN).53 Since measured FID respond factor for various hydrocarbons varying from 0.90 to 1.07,53 , 57 (link) it is reasonable to assume the wide hydrocarbons we obtained has the respond factor of 1.
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2

Cholesterol and Fatty Acid Analysis in HuH7 Cells

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HuH7 cells (2 × 106) were scraped in ice-cold water and centrifuged at 10,000× g for 5 min at 4 °C. Membrane pellets were dried and dissolved in 1 mL of ice-cold dichloromethane. Insoluble material was removed by centrifugation at high speed for 10 min at 4 °C. The supernatants were dried and resuspended in acetonitrile. Samples were solubilized in pyridine (50 μL) and derivatized with 25 μL of N,O-bis(trimethylsilyl(TMS)trifluoroacetamide (BSTFA) with a reaction time of 90 min. A volume of 1 μL was injected, with a split ratio of 1:10. GC-MS analyses were carried out on a Shimadzu GCMS 2010 plus (Kyoto, Japan) with the following parameters: Injection temperature 280 °C, ramp 0–1.00 min 100 °C, 1.00–6.00 min 100–320 °C, hold for 2.33 min. Column flow 1.10 mL/min. Linear velocity 39 cm/s. Helium gas was used. Ion source temperature 200 °C, interface 320 °C, solvent cut 5.9 min, scan 35–600 m/z. Detector voltage 0.1 kV. Separation was performed on an Agilent (Santa Clara, CA, USA.) SIL-8, 30 m × 0.25 mm column, 0.25 μm. Cholesterol-TMS (m/z: 458, 368; 329; 129; 73; 75), palmitic acid-TMS (m/z: 313; 117; 73), and myristic acid-TMS (m/z: 285; 145; 117; 73) were identified by comparing their retention time and fragmentation to library standards.
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3

Quantitative Sugar Analysis by GC-MS

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Sugar analysis was performed as described previously [30 (link)]. The liquid fraction was neutralized to pH 5.0 by the addition of calcium hydroxide. An aliquot of sample (1.5 μL) was mixed with 1.5 μL of 0.1 % (w/w) Ribitol as internal standard, and then the mixture was dried in a vacuum concentrator (7810010; Labconco, Kansas City, MO, USA). The dried residue was dissolved in 100 μL of 20 mg/mL of methoxyamine hydrochloride in pyridine and incubated at 30 °C for 90 min, after which 50 μL of N-methyl-N-trimethylsilyltrifluoroacetamide was added and the sample was incubated at 37 °C for 30 min. A 10 μL aliquot of the solution was subjected to gas chromatography-mass spectrometry (GC–MS) (GCMS-2010plus; Shimadzu, Kyoto, Japan) under the following conditions: column, Agilent CP-Sil 8CB-MS (30 m × 0.25 mm); carrier gas, helium; injection temperature, 230 °C; oven temperature, 80 °C at t = 0–2 min, then increased to 330 °C at 15 °C/min.
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4

Spectroscopic and Thermal Analysis of Compounds

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NMR spectra were recorded on a Bruker 400 MHz spectrometer in CDCl3 with tetramethylsilane (TMS) as the interval standard. Matrix Assisted Laser Desorption Ionization (coupled to a Time-Of-Flight analyzer) experiments (MALDI-TOF) was recorded on a Shimadzu GCMS 2010 PLUS. Thermogravimetric analyses (TGA) measurements were conducted by a Shimadzu DTG-60H under a heating rate of 10oC min–1 and a nitrogen flow rate of 50 cm3 min–1. Differential scanning calorimetry (DSC) measurements were performed using a Shimadzu Instruments DSC-60A and DSC data were collected from 30 to 200 oC at a rate of 10 oC min–1 under N2 flow.
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5

Byproduct Analysis of Liquid Fraction

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Byproduct analysis was performed as described previously [30 (link)]. Acetone (900 μL) was added to 100 µL of liquid fraction and mixed thoroughly. The sample was then centrifuged at 21,880×g and room temperature for 10 min. The supernatant (10 µL) was subjected to GC–MS analysis (GC-MS-2010plus; Shimadzu). 5-HMF and furfural were analyzed under the following conditions: column, Agilent CP-Sil 8CB-MS (30 m × 0.25 mm); carrier gas, helium; injection temperature, 250 °C; oven temperature, 50 °C at t = 0–5 min, then increased to 280 °C at 20 °C/min. Acetic acid and formic acid were analyzed under the following conditions: column, Agilent DB-FFAP (60 m × 0.25 mm); carrier gas, helium; injection temperature, 250 °C; oven temperature, 100 °C at t = 0 to 5 min, then increased to 230 °C at 10 °C/min.
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6

Analysis of Essential Oil Constituents

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Gas chromatography-flame ionization detection and gas chromatography–mass spectrometry analyses were accomplished with Shimadzu QP2010 Plus and GCMS2010 Plus (Shimadzu Corporation, Kyoto, Japan) systems. The GC-MS and GC-FID conditions and the identification of the chemical constituents of the EOs were carried out in agreement with the methodology proposed by Santos et al. [43 (link)].
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7

GC-FID and GC-MS Analysis of CZ-EO

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CZ-EO was dissolved in ethyl ether and analyzed by gas chromatography flame- ionization detection (GC-FID) and gas chromatography-mass spectrometry (GC–MS) on the Shimadzu QP5000 Plus and GCMS2010 Plus (Shimadzu Corporation, Kyoto, Japan) systems, respectively. During GC-FID, the column temperature was programmed to rise from 60 to 240 °C at 3 °C/min and held at 240 °C for 5 min. H2 was used as the carrier gas at a flow rate of 1.0 mL/min. The equipment was set to operate in the injection mode; the injection volume was 0.1 µL (split ratio of 1:10); and the injector and detector temperatures were 240 and 280 °C, respectively. Relative concentrations of the CZ-EO compounds were estimated from the relative peak areas (%) of the GC-FID chromatograms, and expressed as the average of triplicate analyses and the corresponding standard deviations. GC-MS conditions and the identification were based on a previously reported methodology [17 (link)]. The volatile components in CZ-EO (Table 1) were identified on the basis of their retention indices on an Rtx-5MS (30 m × 0.25 mm; 0.250 µm) capillary column, under the same operating conditions used for the GC relative to a homologous series of n-alkanes (C8–C20). The structures were computer matched with Wiley 7, NIST 08, and FFNSC 1.2, and their fragmentation patterns were compared with literature data [21 ].
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8

Aroma Profile of Roasted Tan Mutton

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Aroma analysis of roasted Tan mutton was performed by a GC-MS system (GC-MS 2010 plus, SHIMADZU, Japan) jointed with solid-phase microextraction (SPME) fiber. Briefly, 2 ± 0.01 g of the sample after crushed were placed into a 15 mL headspace bottle with 4 μL of internal standard (1,2-dichlorobenzene, 6.42 μg/mL in methanol). After mixing with a vortex, the headspace bottle was sealed with a PTFE diaphragm, and placed in a water bath at 55°C for 20 min. The aged SPME fiber (50/30 μm DVB / CAR / PDMS) was inserted into a sealed extraction bottle and kept on the top of the mutton sample for adsorption for 30 min, and then transferred to the GC inlet for desorption at 250°C for 5 min. The chromatographic capillary column was DB-WAX (30 m × 0.25 mm × 0.25 μm, Agilent Technologies, Santa Clara, CA). The GC and MS were carried out in accordance with our previous study (25 (link)).
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9

Metabolic Profiling of HuH7 Cells by GC-MS

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For GC-MS analyses, 2 × 106 HuH7 cells were scraped in 400 μL ice-cold water to be then supplemented with 400 μL methanol and 500 μL chloroform. After vigorous vortexing, samples were centrifuged at 10,000× g for 10 min at 4 °C. Organic phases were collected and dried. Sample was solubilized in pyridine (50 μL) and derivatized with 25 μL of N,O-Bis(trimethylsilyl(TMS)trifluoroacetamide with trimethylchlorosilane (BSTFA+TMS) with a reaction time of 90 min. GC-MS analyses were carried out on a Shimadzu GCMS 2010plus (Kyoto, Japan) with the following parameters. Injection temperature 280 °C, Ramp 0–1.00 min 100 °C, 1.00–6.00 min 100–320 °C, hold for 2.33 min, column flow 1.10 mL/min, linear velocity 39 cm/s. Helium gas was used. Ion source temperature 200 °C, Interface 320 °C, Solvent cut 5.9 min, Scan 35–600 m/z. Detector voltage 0.1 kV. Separation was performed on an Agilent (Santa Clara, CA, USA) SIL-8, 30 m by 0.25 mm, 0.25 μm. Then, 1 μL was injected, split ratio 1:10.
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10

GC-MS Analysis of Plant Extracts

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GC-MS analysis was done according to method described by Yong et al. [4 (link)]. Crude extract of plant sample was analysed with gas chromatography equipped with mass spectrometry (GC-MS-2010 Plus-Shimadzu). The column temperature was set to 50°C for 4 min before it was increased to 320°C at the rate of 7°C/min and was then held for 20 min. The injector temperature was set at 280°C (split mode with the ratio being adjusted to 20 : 1, injection volume = 0.1 µL). The flow rate of the helium carrier gas was set to 1 mL/min with total run time of 60 min. Mass spectra were obtained from the range m/z 40 to 700 and the electron ionization at 70 eV. The chromatogram of the sample was identified by comparing their mass spectra with the library data and the GC retention time against known standards.
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