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3 protocols using mouse anti beclin 1

1

Tannic Acid Effect on Autophagy Markers

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A375 cells were treated with TanII A (1, 2, or 4 μg/mL) for 48 h in 6 well plate (5 × 105 cell/2 ml) at 37 °C and 5% CO2. The cells with 0.1% DMSO was used as negative control. At the time of harvest, cells were washed with PBS, and whole cell protein samples were extracted with radioimmunoprecipitation assay buffer (0.5% Nonidet p-40, 10 mM Tris, pH 7.4, 150 mM NaCl, 1% SDS) with a protease inhibitor cocktail (Sigma Life Science and Biochemicals, St. Louis, MO). Protein (70 μg/well) was separated by SDS-PAGE and transferred to PVDF membranes. The primary antibodies used for the Western blots included mouse anti-Beclin-1, mouse anti-microscopic light chain I protein 3 (the microtubule-associated protein light chain3, LC3) -II, and mouse anti-β-actin (Santa Cruz Biotechnology, TX, USA); mouse anti-phosphatidylinositol 3-kinase (PI3K), mouse anti- phosphorylated (p) - protein kinase B (P-Akt), p- mammalian target of rapamycin (P-mTOR), p-p70S6K1 (Cell Signaling Co, MA, USA). The secondary antibodies included HRP-conjugated ECL sheep anti-mouse IgG (GE Amersham Biosciences, USA). The ECL Western Blotting Detection Kit (GE Amersham Biosciences, USA) was used to detect Chemiluminescent signals in the X-ray film. The GAPDH was used as internal protein level control. Each experiment was repeated three times.
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2

Antibody Characterization Protocol

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The following commercial antibodies were used: rabbit anti-Vps34 (PTG), rabbit anti-FBXL20 (Abcam), goat anti-FBXL20 (Santa Cruz Biotechnology), rabbit anti-p53 (PTG), rabbit anti-LC3 (Sigma), mouse anti-Beclin1 (Santa Cruz Biotechnology), rabbit anti-Atg14 (MBL), rabbit anti-GFP (Santa Cruz Biotechnology), mouse anti-GFP (Abmart), mouse anti-HA (Abmart), rabbit anti-Atg12–Atg5 (Epitomics), rabbit anti-CUL1 (Epitomics), rabbit anti-Skp1 (Epitomics), mouse anti-Flag (Sigma), mouse anti-Myc (Sigma), rabbit anti-ubiquitin (Dako), and rabbit anti-Tubulin (MBL). Chemicals were from Sigma.
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3

Western Blot Analysis of Protein Targets

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The extraction of cellular proteins and their detection via western blotting were performed as previously described [21 (link), 24 (link)]. Western blotting was performed using the following primary antibodies: mouse anti-AR, mouse anti-beclin1, goat anti-LC3β, mouse anti-LAMP1, and rabbit anti-IKKγ antibodies (1:500, Santa Cruz Biotechnology); mouse anti-TLR4, rabbit anti-iNOS, rabbit anti-IKKα, and rabbit anti-4-HNE (1:1000, Abcam); rabbit anti-IKKβ and rabbit anti-phospho-IκBα antibodies (1:1000, Epitomics); rabbit anti-phospho-IKKα/β, rabbit anti-IκBα, rabbit anti-p65, and rabbit anti-phospho-p65 antibodies (1:1000, Cell Signaling Technology, Danvers, MA, USA); and mouse anti-β-actin antibodies (1:8000, Sigma-Aldrich). The blots were then incubated with their respective secondary antibodies: horseradish peroxidase-conjugated goat anti-rabbit IgG, goat anti-mouse IgG (both 1:8000, Abcam), and donkey anti-goat IgG (1:5000, Santa Cruz Biotechnology). β-actin was used as the loading control. The immunoreactive bands were scanned using the Bio-Rad ChemiDoc™ XRS+ imager with Image Lab™ Software (Bio-Rad Laboratories, CA, USA). Band intensity was quantified using Quantity One software (Bio-Rad Laboratories).
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