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Rat diaphorase

Manufactured by Merck Group

Rat diaphorase is a laboratory enzyme used in research applications. It functions as an oxidoreductase, catalyzing the transfer of electrons between molecules. This enzyme is derived from rat tissue samples.

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7 protocols using rat diaphorase

1

Sensitive NADH Detection Assay

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Example 37

Two fold serial dilutions of NADH (Sigma) were made in PBS starting from 10 μM. 25 ul of each dilution was transferred into wells of a 384-well plates. Detection reagent was made by adding 10 U/ml rat diaphorase (Sigma) and 40 μM proluciferin substrate PBI 4312 into Luciferin Detection Reagent (LDR; Promega Cat. No V8920). 25 μl of detection reagent was added to the NADH samples. The reactions were incubated for 30 minutes at room temperature, and luminescence was measured using a Tecan plate luminometer.

The results show that the diaphorase enzyme remains active in the detection reagent, and the NADH-dependent reduction of the proluciferin by diaphorase into luciferin can occur simultaneously with the luciferin-dependent light-generating luciferase reaction (FIG. 29).

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2

Dinucleotide Detection and Quantification

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Example 40

Two fold serial dilutions of NADH, NADPH, NAD, and NADP (Sigma) were made in PBS starting from 0.313 uM. 10 ul of each dilution was transferred into wells of a 384-well plate. Detection reagents were made by adding 10 U/ml of rat diaphorase (Sigma), 40 uM proluciferin substrate PBI 4312 and NADP or NAD dependent enzyme amplification systems consisting of Glucose-6Phosphate Dehydrogenase (5 U/ml) and glucose-6P (0.5 mM) for NADP or Lactate Dehydrogenase (5 U/ml) and Lactate (40 mM) for NAD into Luciferin Detection Reagent (LDR; Promega Cat. No V8920). 10 ul of appropriate detection reagent was added to the dinucleotide samples. The reactions were incubated for 30 minutes at room temperature, and luminescence measured on a Tecan plate luminometer.

The results show that when the detection method described herein is combined with the dinucleotide specific amplification enzyme system, light is generated only in the samples containing appropriate dinucleotide (FIG. 31).

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3

NADP Detection using Pro-luciferin Substrate

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Example 39

Two fold serial dilutions of NADP (Sigma) were made in PBS starting from 0.5 μM. 25 μl of each dilution was transferred into wells of a 384-well plates. Detection reagent was made by adding 10 U/ml rat diaphorase (Sigma), 40 μM proluciferin substrate PBI 4312 and NADP dependent enzyme amplification system consisting of 0.5 U/ml glucose 6 phosphate Dehydrogenase (Sigma) and 500 μM glucose 6 phosphate (Sigma) into Luciferin Detection Reagent (LDR; Promega Cat. No V8920). 25μ of detection reagent was added to the NADP samples. The reaction was incubated for 30 minutes at room temperature, and luminescence measured using a Tecan plate luminometer.

The following example demonstrates the use of the pro-luciferin substrate PBI 4312 to detect and measure NADP Luminescence generated is indicative of the presence of NADP with the light output directly proportional to the amount of NADP present in the sample. The results show that the diaphorase and glucose 6 phosphate Dehydrogenase enzymes remain active in detection reagent, and all three enzymatic reactions can occur simultaneously (FIG. 30B).

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4

Cell Quantification via Proluciferin Conversion

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Example 41

Two fold serial dilutions of PC3 cells were made in F12K media with 10% FBS. 25 ul of each dilution was transferred into wells of a 384-well plate. Detection reagent was made by adding 10 U/ml rat diaphorase (Sigma) and 40 μM proluciferin substrate PBI 4312 into Luciferin Detection Reagent (LDR; Promega Cat. No V8920). 25 μl of detection reagent was added directly to the cells. The reactions were incubated for 30 minutes at room temperature, and luminescence measured using a Tecan plate luminometer.

FIG. 32 shows the correlation between cell number and luminescence indicating a direct relationship between luminescence generated via proluciferin conversion and the total amount of reduced dinucleotides NADH/NADPH present in the cells. The results also show that detection system comprised of diaphorase and pro-luciferin PBI 4312 combined with Luciferase Detection Reagent (LDR) can be added directly to the cells to measure the amount of reduced dinucleotides present in the cells.

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5

Kinetic Assay for Diaphorase-Mediated Substrate Reduction

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Example 33

Each substrate (PBI-4312, 4550 and 4565) was incubated at 20 μM with 10 μM NADH (Sigma) and 5 u/ml rat diaphorase (Sigma) in a volume of 10 μl in 50 mM Tris pH 7.5. Forty identical reactions were prepared. At the timepoints indicated in Table 5, 10 μl LDR with 500 μM menadione was added to 4 of the reactions for each compound. Luminescence was measured at as previously described. RLUs of quadruplicate reactions were averaged (Table 5 and FIG. 22a). Each average signal was also divided by the maximum signal obtained with that compound to calculate the fraction of maximum signal (FIG. 22b).

TABLE 5
Avg RLU
Reaction time (min)PBI-4312PBI-4550PBI-4565
0780959651294
215074523519541615
520682224451769945
10305968251968117067
15366592267318154427
25499283260601252212
30529063261773262123
40544475245014278567
50599165251575328037
60571954236357330433

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6

NAD Detection via Luminescent Assay

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Example 38

Two fold serial dilutions of NAD (Sigma) were made in PBS starting from 0.25 μM. 25 μl of each dilution was transferred into wells of a 384-well plates. Detection reagent was made by adding 10 U/ml rat diaphorase (Sigma), 40 μM proluciferin substrate PBI 4312 and NAD dependent enzyme amplification system consisting of 5 U/ml Lactate Dehydrogenase (Calbiochem) and 40 mM lactate (Sigma) into Luciferin Detection Reagent (LDR; Promega Cat. No V8920). 25 μl of the detection reagent was added to the NAD samples. The reactions were incubated for 30 minutes at room temperature, and luminescence measured using a Tecan plate luminometer.

The following example demonstrates the use of the pro-luciferin substrate PBI-4312 to detect and measure NAD Luminescence generated is indicative of the presence of NAD with the light output directly proportional to the amount of NAD present in the sample. The results show that the diaphorase and lactate dehydrogenase enzymes remain active in the detection reagent, and all three enzymatic reactions can occur simultaneously (FIG. 30A)

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7

Inhibition of Diaphorase Activity by Menadione

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Example 32

Each substrate (PBI-4312, 4550 and 4565) was incubated at 20 μM with 10 μM NADH (Sigma) and 5 u/ml rat diaphorase (Sigma) in a volume of 10 μl 50 mM Tris pH 7.5. Eight identical reactions for each substrate were prepared. The samples were incubated at 5 minutes at room temperature, and 4 of the reactions received 10 μl LDR, and the other 4 reactions received 10 μl LDR with 500 μM menadione. Luciferin generation was monitored over the course of 5 minutes to monitor menadione's inhibition of the diaphorase reaction with each of the 3 substrates. Luminescence was measured, and the RLUs of quadruplicate reactions averaged (Table 4 and FIG. 21). The first reading was taken at approximately one minute after addition of LDR, and the last reading was taken 5 minutes later (˜6 minutes).

TABLE 4
First ReadingLast Reading
WithoutWithWithoutWith
Compoundmenadionemenadionemenadionemenadione
431259003527398555062
45501649517861006032393
45655643244407446

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