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Icap 7000 plus series

Manufactured by Thermo Fisher Scientific
Sourced in United States

The ICAP™ 7000 Plus Series is an inductively coupled plasma (ICP) optical emission spectrometer designed for multi-element analysis. It is capable of determining the concentration of various elements in a sample through the emission of characteristic wavelengths of light.

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3 protocols using icap 7000 plus series

1

Cobalt Quantification in S. aureus

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The samples for ICP-OES were prepared following the protocols described in literatures.41 ,42 (link)
S. aureus RN4220 strains were cultured at 30 °C in 20 mL of CDM (supplemented with 0.5 μM CoCl2). When the cells grew to exponential phase (OD600 ∼ 0.6–0.8), the cultures were chilled on ice for 10 min and then harvested by centrifugation at 7000 g at 4 °C for 10 min. Pellets were washed 3 times using 1 mL of 2 mM EDTA solution, followed by a final wash with 1 mL MilliQ H2O. Next, cells were dried at 100 °C and then digested by 300 μL nitric acid (66–68% HNO3) for 12 h at 80 °C. After diluted to final volumns of 3 mL using MilliQ H2O, the samples were used for element measurements by using the inductively coupled plasma-optical emission spectrometry (iCAP 7000 Plus Series, Thermo Scientific™). Concentrations of cobalt ions of each sample were determined by standard solutions and was calculated assuming 4 × 108 cfu for an OD600 of 1 unit. Each experiment was repeated three times.
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2

Comprehensive Soil Characterization Protocol

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Particle size distribution of soil was determined using sieve methods according to [74 ]. Water holding capacity of soil was determined using the gravimetric method, hydraulic conductivity by Darcy’s law, and the soil porosity from the measured values of soil particle and bulk densities calculations [75 ]. Soil electrical conductivity (EC) was measured using HANNA (HI9835) EC meter in 1:2.5 soil/water extract, soil pH (1:2.5 DI water suspension) by Jenway 3505 pH/mV/Temperature Meter and the total carbonate content (expressed as CaCO3) using the gasometric determination following 6.0 M HCl application [76 ]. Water-soluble cations and anions (1:2.5 DI water extract) were determined using standard methods [76 ]: Na+ using a Sherwood, flame photometer (MODEL 360), Ca2+, Mg2+, and K+ using ICP-OES Thermo Scientific™ iCAP™ 7000 Plus Series, CO32− and HCO3 by titration with a standardized H2SO4 solution and Cl by AgNO3 titration. Total organic elements concentration in soil (C, N, H, and S) was determined using dry combustion method by a Thermo Scientific Flash 2000 analyzer. Available concentrations of PTEs were determined using ICP-OES after extraction by diethylene tri-amine Penta acetic acid (DTPA).
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3

Nutrient Use Efficiency Evaluation

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Fresh weight (mg) of root and leaves was measured at harvest (55 days after germination) using an analytical balance. The dry weight was measured by oven-drying at 70˚C for 72 h. The plant samples were analyzed for total N (TKN), NO3−, and NH4+ using an EasyChem Plus analyzer (Chinchilla Scientific, Oak Brook, IL, USA). Total elemental analysis was conducted using ICP-OES (Thermo Scientific™ iCAP™ 7000 Plus Series, Waltham, MA, USA). The nitrogen use efficiency (NUE) percentage was calculated as a ratio of TKN x dry biomass (g)/N input (g) separately under HN and LN. For the rest of the minerals (Ca, Mg, K, P, Fe, Cu, Zn), nutrient utilization efficiencies (NuUtE) were calculated by taking the ratio of dry biomass per plant to mineral content using established methods (Corrado et al., 2021 (link)). Individual mineral use efficiencies were obtained by taking the ratio of individual mineral amounts recovered from plant tissue to the concentration (ppm) applied through fertilizers.
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