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12 protocols using il 1β

1

Cytokine Levels and Lymphocyte Cytotoxicity

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The levels of TNF-α and IL-1β (Novus Biologicals, Inc.) in pleural effusions and the blood of mice were determined. Anti-CD8 antibody (Abcam), anti-PD1 antibody (EPR20665, Abcam), anti-PDL1 antibody (EPR20529, Abcam), anti-GAPDH antibody (ab8245, Abcam), and anti-β-actin antibody (13E5, CST) were used for antigen detection. Lymphocyte and tumor cell lines were co-cultured in 96-well plates at a ratio of 20:1. The LDH release experiment was then performed using the lactate dehydrogenase cytotoxicity test kit (Beyotime Biotechnology).
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2

Western Blot Analysis of Immune Markers

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Tissues or cultured BMMCs were lysed, and the protein was extracted. The protein lysate from each sample was separated electrophoretically on a sodium dodecyl sulfate-polyacrylamide gel and then transferred to a polyvinylidene fluoride (PVDF) membrane. After blocking with 5% nonfat milk in TBS-T (containing 0.1% Tween-20) for 2 hrs, the membranes were incubated with iNOS, P2X7, IL-1β (Novus Biologicals), and tryptase (AA1) antibodies in 5% nonfat milk in TBS-T overnight at 4°C. After washes with TBS-T, the membranes were incubated with the appropriate secondary antibodies for 2 hrs. The results were visualized using an ECL chemiluminescence system. GAPDH rabbit mAb antibody (Cell Signaling Technology) was also used as a probed control to ensure the loading of equivalent amounts of the sample proteins. The band densities were compared in TotalLab software (version 2.01; Bio-Rad, Hercules, CA).
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Western Blot Analysis of Corneal Proteins

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Mice corneas (n = 6/group/time) were harvested at 3 days p.i. Protein extraction and concentration determination were performed as described previously.4 (link) The protein was separated on 12% acrylamide SDS-PAGE and transferred to polyvinylidene difluoride (PVDF; Solarbio) membrane. Membranes were washed in PBS containing 0.05% Tween-20 (Bio-Rad, Hercules, CA, USA) (PBST) three times. After being blocked with blocking buffer (Beyotime, Jiangsu, China) at 37°C for 2 hours, the membrane was incubated with antibodies to GAPDH (1:1000; Elabscience, Wuhan, China), CXCL-1 (1:1000; Affinity Biosciences, Jiangsu, China), LC3B (1:1000; Cell Signaling Technology, Danvers, MA, USA), SQSTM1/p62 (1:1000; Cell Signaling Technology), Beclin-1 (1:1000; Cell Signaling Technology), LAMP-1 (1:1000; Cell Signaling Technology), IL-1β (1:1000; NOVUS, Littleton, CO, USA), IL-18 (1:500; Abcam, Cambridge, MA, USA), HMGB1 (1:1000; Abcam), TNF-α (1:2000; Proteintech Group, Wuhan, China), or IL-10 (1:1000; Abcam) at 4°C overnight. Membranes were washed in PBS containing 0.05% Tween-20 (Bio-Rad, Hercules, CA, USA) (PBST) three times. Membranes were incubated with corresponding peroxidase-conjugated secondary antibodies (1:5000; Santa Cruz Biotechnology, Santa Cruz, CA, USA) at 37°C for 1 hour. Membranes were developed by chemiluminescence (ECL; Thermo Fisher Scientific, Waltham, MA, USA).
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4

Immunofluorescence Imaging of Kidney Inflammation

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After dehydration with 30% sucrose and embedding with optimal cutting temperature compound (OCT), the kidney tissue was sliced by a freezing microtome with a thickness of 7 μm. Next, kidney sections were incubated with rabbit or mouse antibodies against CD68 (1 : 200, lot: ab955, Abcam), NLRP3 (1 : 100, lot: F1716, Eterlife, UK), caspase-1 (1 : 200, lot: 00046167, Proteintech, USA), and IL-1β (1 : 200, lot: NB60-633, Novus, USA). Then, the sections were successively incubated with fluorescently labeled secondary antibodies and 4,6-diamidino-2-phenylindole (DAPI). Finally, the sections were observed by using fluorescence microscopy.
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5

Flow Cytometric Analysis of Inflammatory Modulation of HLA Expression

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HeLa cells were seeded in a 12-well plate (1.2 X 105 cells/well) and treated with different concentrations of interleukin-1 beta (IL-1β) (Novus biologicals, CO, USA), IFN-γ (Peprotech, IL, USA) and tumor necrosis factor (TNF) (Origene, MD, USA) separately or in combination for 24h. Then, the cells were harvested, stained with monoclonal anti-HLA-A,B,C antibody (clone W6/32) conjugated with FITC (Cat. 311404, Biolegend, CA, USA) and analyzed by flow cytometry. IFN-γ at the concentration of 250 U/ml was chosen to establish inflammatory conditions (Supplementary Figure 1).
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6

Immunohistochemistry of Inflammatory Markers

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Joint tissues were incubated overnight at 4°C with primary antibodies against TNFα (Abcam, Cambridge, UK), IL-17 (Abcam), IL-6 (Abcam), and IL-1β (Novus Biologicals, Littleton, CO, USA). Subsequently, samples were incubated with a biotinylated streptavidin–peroxidase complex for 1 h, and the signals were developed using chromogen 3,3′-diaminobenzidine (Thermo Scientific, Rockford, IL, USA). The sections were examined under a photomicroscope (Olympus, Tokyo, Japan). The number of positive cells in high-power digital images (magnification, ×400) was counted using Adobe Photoshop software (Adobe, San Jose, CA, USA). Stained cells were counted independently by three observers, and the mean values were evaluated.
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7

Quantification of Macrophage and Inflammatory Markers

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Macrophage and inflammation expression were evaluated by Immunohistochemical (IHC) analysis following a general IHC protocol. Tissue sections were immunostained at 4°C overnight with antibody against the macrophage marker RAM11 (DAKO, Santa Clara, CA, USA), or with antibodies against the inflammatory markers: TNF-α (ABCAM, Cambridge, United Kingdom), IL-1β (NOVUS, Littleton, CO, USA), or IL-6 (Santa Cruz Biotechnologies, CA, USA). The primary antibody was detected using a peroxidase-based kit (DAKO, Glostrup, Denmark), and visualized using 3,3′-diaminobenzidine substrate with enhancer (DAKO). The sections were subsequently counterstained with hematoxylin (DAKO). Digital images of the vessels were scanned using a SCN400 scanner (Leica), and histomorphometry was performed using LAS 4.2 software (Leica).
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8

ELISA Analysis of Inflammatory Mediators

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Specific enzyme-linked immunosorbent assay (ELISA) kits for rats (Novus Biologicals, Centennial, CO, USA) were employed to assess the levels of inflammatory mediators in the hippocampal tissue, including tumor necrosis factor-α (TNF-α; catalog No.: NBP1-92681), interleukin-1β (IL-1β; catalog No.: NBP1-92,02), interleukin-6 (IL-6; catalog No.: NBP1-92697), interleukin-10 (IL-10; catalog No.: NBP1-92701), prostaglandin E2 (PGE2; catalog No.: NBP1-02321), and cyclooxygenase-2 (COX-2; catalog No.: NB600-971), according to the manufacturer’s guidelines.
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9

Western Blot Analysis of Retinal Proteins

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Retinas were lysed in a RIPA buffer (EMD Merck, Kenilworth, USA) containing a phosphatase inhibitor PhosSTOP (Roche, Branchburg, USA). Protein was separated on NuPAGE gels (Life Technologies, Carlsbad, USA) and transferred to polyvinylidene difluoride membranes (Life Technologies). Blots were blocked with 5% nonfat milk in a TBST buffer (0.02 M Tris-base (pH 7.6), 0.8% NaCl, 0.1% Tween 20) for 60 min. After rinsing with the TBST buffer, samples were incubated with primary antibodies at 4 °C overnight. The antibodies we used were as follows: iNOS (1:500, Abcam, Cambridge, UK), Cl-caspase-3 (1:1000, Cell Signaling, Danvers, USA), IL-1β (1:250, Novus Biologicals, Littleton, USA), TNF-α (1:500, Abcam), CNTF (1:3000, Abcam), p-ERK (1:1000, Cell Signaling), and GAPDH (1:5000, Cell Signaling). Membranes were washed twice with the TBST buffer, followed by incubation with appropriate Horseradish Peroxidase (HRP)-conjugated secondary antibodies (1:10000, Jackson Immunoresearch, PA, USA) at room temperature for 1 hour and detected with Immobilon® ECL Ultra Western HRP Substrate (Millipore, Billerica, USA). Results were quantified using ImageJ software (n = 6 in each group).
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10

Quantitative Western Blot Analysis

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Western blotting was performed on whole-cell lysates as previously described (LaRocca et al., 2019 (link)). Semi-confluent cultures were lysed in ice cold radio-immunoprecipitation assay lysis buffer with protease and phosphatase inhibitors (Roche), and 10 μg protein was separated by electrophoresis on 4–12% polyacrylamide gels then transferred to nitrocellulose membranes (all reagents from Bio-Rad). Membranes were blocked (5% milk in TBS-Tween buffer) and incubated for 18 h with primary antibodies: CD44 (Abcam, 1:1000 dilution); GFAP (Thermo-Fisher, 1:3000); ICAM-1 (Novus Biologicals, 1:2000); C3 (Novus, 1:2000); IL-1β (Novus, 1:1000). Proteins were then detected with horseradish peroxidase-conjugated secondary antibodies (Jackson ImmunoResearch) and ECL chemiluminescent substrate (Pierce) on a ChemiDoc imager (Bio-Rad), and signal (protein expression) was normalized to glyceraldehyde-3-phosphate dehydrogenase (GAPDH; Cell Signaling, 1:1000).
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