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Anti claudin 4

Manufactured by Thermo Fisher Scientific
Sourced in United States

Anti-claudin-4 is a laboratory reagent used for the detection and analysis of the claudin-4 protein, which is a component of tight junctions in epithelial cells. This product can be used in various applications, such as immunohistochemistry, Western blotting, and flow cytometry, to study the expression and localization of claudin-4 in biological samples.

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14 protocols using anti claudin 4

1

Protein Analysis of Lung Tissue

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Total protein was extracted from the lung tissue, and its concentration was determined using an enhanced BCA kit (Beyotime Biotechnology). Thereafter, 30 µg of the protein sample was subjected to 10% SDS-polyacrylamide gel electrophoresis, followed by transfer of the separated proteins to a polyvinylidene fluoride membrane (ISEQ00010, Millipore, USA) (26 (link)). After blocking with 5% skim milk at 37 °C for 2 h, the membrane was incubated with anti-claudin-18 (1:1,000, Abcam, USA), anti-claudin-4 (1:1,000, Invitrogen, USA), anti-SFTPC (1:1,000, Proteintech, China), anti-podoplanin (1:1,000, Santa Cruz, USA), anti-GSK-3β (1:1,000, CST,USA), anti-p-GSK-3β (1:1,000, CST, USA), and anti-β-catenin (1: 1,000, CST, USA) antibodies overnight at 4 °C. The next day, membranes were incubated with the corresponding horseradish peroxide-conjugated secondary antibody (S0001, S0002, Affinity) at 37 °C for 2 h. Amersham Imager 600 (GE Healthcare Life Sciences) was used to detect chemiluminescence signals, and the Image J 1.8.0 was used to calculate the gray value. The experiment was repeated at least thrice.
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2

Multiplexed Immunofluorescence Staining Protocol

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Automated immunofluorescence (IF) staining was performed at the
Molecular Cytology Core Facility of Memorial Sloan Kettering Cancer Center
using a Discovery XT processor (Ventana Medical Systems). The tissue
sections were deparaffinized with EZPrep buffer (Ventana Medical Systems),
antigen retrieval was performed with CC1 buffer (Ventana Medical Systems).
Sections were blocked for 30 min with Background Buster solution (Innovex),
followed by avidin-biotin blocking for 8 min (Ventana Medical Systems).
Multiplexed immunofluorescence stainings were performed as previously
described (Yarilin et al., 2015 (link)).
Staining was performed in the following order: Anti-Claudin-4 (Invitrogen,
catalog #36–4800, 5 μg/ml), anti-Claudin-2 (Invitrogen,
catalog #32–5600, 5 μg/ml), anti-Lysozyme (DAKO, catalog
#A0099, 2 μg/ml). After staining slides were counterstained with DAPI
(Sigma Aldrich, catalog #D9542, 5 μg/ml) for 10 min and coverslipped
with Mowiol mounting reagent. Secondary antibodies used for visualization
were AF488 (Claudin-4), AF594 (Claudin-2), and AF546 (Lysozyme). Slides were
scanned to acquire fluorescence signal.
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3

Immunohistochemical Staining of Tissue Sections

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Paraffin embedded sections (~5-μm thick) were deparaffinized by heating to 60 °C for 15 min, cleared with xylene, followed by an ethanol gradient (75%, 95%, 100%) and water and steamed for 30 min in citrate buffer for antigen retrieval. Tissues were then treated with blocking buffer (goat or donkey serum in PBS containing 1% bovine serum albumin [BSA], 0.1% Triton X-100, 0.05% Tween 20, and 0.05% sodium azide). The primary antibodies used were anti-Ki-67 (Thermo Scientific, Waltham, MA, USA), anti-Lysozyme (Santa Cruz, Dallas, TX, USA), anti-Muc2 (Santa Cruz), anti-CA-1 (Santa Cruz), anti-5HT (Antibodies Incorporated, Davis, CA, USA), anti-Claudin-3 (Invitrogen, Carlsbad, CA, USA), anti-Claudin-4 (Invitrogen). The secondary antibodies used were Alexa Fluor 568- or 488-conjugated goat anti-rabbit IgG, and Alexa Fluor 568- or 488-conjugated donkey anti-rabbit or donkey anti-goat IgG (Life Technologies, Carlsbad, CA, USA). ProLong gold antifade reagent with 4′,6-diamidino-2-phenylindole (DAPI; Invitrogen, Carlsbad, CA, USA) to stain DNA was used to mount tissues. Tissues were viewed on a Zeiss Axio Imager microscope, and images were taken using AxioVision software and an AxioCam HRm camera.
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4

Comprehensive Immunoblotting Analysis

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Anti-JNK(pTpY183/185), anti-c-Src(pY418), anti-phospho-threonine, anti-ZO-1, anti-occludin, and anti-claudin-4 antibodies were purchased from Invitrogen (Carlsbad, CA). Anti-JNK, anti-Ask1, anti-MKK7 and anti-c-Src antibodies were purchased from Millipore (Billerica, MA). HRP-conjugated anti-mouse IgG, HRP-conjugated anti-rabbit IgG and anti-β-actin antibodies were obtained from Sigma Aldrich. AlexaFlour-488-conjugated anti-mouse IgG and Cy3-conjugated anti-rabbit IgG were purchased from Molecular Probes (Eugene, OR). Anti-E-cadherin, anti-β-catenin, and biotin-conjugated anti-p-Tyr antibodies were purchased from BD Biosciences (Billerica, MA). FITC-conjugated anti-mouse Gr-1 antibodies were from MyBioSource (San Diego, CA).
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5

Protein Expression Changes in DON-Treated Cells

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Proteins were extracted from cells (treated with 20 μM DON for 1 h, 2 h, 4 h and 8 h in six wells) and quantified as previously described [79 (link)]. After degenerating, 30 μg of protein were separated by electrophoresis at 300 V for 20 min, and proteins were subsequently electrotransferred onto polyvinylidene difluoride membranes (Millipore). The membranes were blocked for 1.5 h using 5% (v/v) non-fat milk at room temperature and then incubated overnight at 4 °C with the antibodies diluted 1:1000) of: anti-claudin-4 (Invitrogen, Carlsbad, CA, USA), β-actin, p38, phospho-p38 (Thr180/Tyr182), Erk1/2, phospho-Erk1/2 (Thr202/Tyr204), FoxO1, phospho-FoxO1 (Ser256), STAT3, phospho-STAT3 (Tyr705), STAT1, phospho-STAT1 (Ser727), Akt, phospho-Akt (Ser473), caspase-3, cleave caspase-3 (Asp175) antibodies (Cell Signaling, Danvers, MA, USA). Anti-β-actin antibody was used as loading control. Membranes were then washed (five times, 3 min each wash). This was followed by a 1 h incubation with horseradish peroxidase-labeled goat anti-mouse/chicken/rabbit IgG (Santa Cruz Biotechnology, Dallas, TX, USA) at a dilution of 1:1000. Finally, chemiluminescent bands were visualized on the membranes using ChemiDoc™ Touch Imaging System (Bio-Rad, Hercules, CA, USA).
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6

Protein Extraction and Western Blot Analysis

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To extract cellular protein, tissues were lysed by Pro-prep (catalog No. 17081; iNtRON Biotechnology, Korea), then homogenized by 20 strokes with a Dounce homogenizer, after which samples were centrifuged at 15,300 × g for 20 min at 4℃. Next, 50 µg of protein was loaded onto a 12.5% sodium dodecyl sulfate polyacrylamide gel, then transferred to nitrocellulose membrane (catalog No. IPVH00010; Millipore, USA). The blot was blocked with tris-buffered saline containing 0.5% tween-20 (TBS-T) including 5% skim milk for 1 h at room temperature (RT), then probed with the following primary antibodies at 4℃ overnight: anti-claudin-1 (1 : 1,000; 37-4900; Invitrogen, USA), anti-claudin-2 (1 : 1,000; 51-6100; Invitrogen), anti-claudin-4 (1 : 1,000; 36-4800; Invitrogen), anti-claudin-5 (1 : 1,000; 34-1600; Invitrogen), and anti-GAPDH (1 : 1,000; SC-137179; Santa Cruz Biotechnology, USA). After washing three times with TBS-T, the blots were treated with horseradish peroxidase-conjugated secondary antibody (bs-0296G-HRP; Bioss, USA; mouse IgG 1:3000 or sc-2004; Santa Cruz Biotech; rabbit IgG 1:3000) in TBS-T containing 5% skim milk for 2 h at RT. The blots were subsequently exposed to enhanced chemiluminescence reagent (SC-2048; Santa Cruz Biotech) and developed via GeneGnome5 (MOL5405; Syngene, USA). Signal specificity was confirmed through blotting without primary antibody.
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7

Evaluating Colonic Tight Junction Integrity

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As described previously [10 (link)], for WB analysis, colonic mucosal stripping was obtained from the TgM9 and WT mice (n=20 per group) with and without CAC. In vivo WB analysis was performed with 30μg/ well of cell lysates. WB analysis for in vitro model was performed using whole cell lysates (30μg/ well) of CaCo2BBE cells with and without MMP9. 106 cells of CaCo2BBE were grown on 6 well plate for 100% confluency. As described by Bazzoni et al [62 (link)], we collected Triton X-100 soluble and insoluble fraction of CaCo2BBE cells with and without MMP9 to assess TJ integrity and 10μg/ well was used for WB analysis. The antibodies used were anti-MMP9 (Abcam, Cambridge, MA), anti-EGFR (Cell Signaling, Beverly, MA), anti-Claudin-2 (Life Technologies, Rockford, IL), anti-Claudin-4 (Invitrogen, Rockford, IL), anti-Claudin-5 (Invitrogen), anti-TFF3 (Cloud-Clone Corp., Katy, TX), anti-Sp1 (Upstate Cell Signaling Solutions, Lake Placid, NY), anti-Occludin (Invitrogen), anti-STAT3 (Cell Signaling). Goat anti-mouse secondary antibody (Bio-Rad, Hercules, CA) or goat anti-rabbit secondary antibody (Bio-Rad) were used. Densitometry graphs were generated by using image acquisition and analysis software by VisionWorksLS Analysis Software (UVP, Upland, CA).
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8

Immunoblotting Analysis of Colonic Epithelial Cell Proteins

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Mouse colonic epithelial cells were collected by scraping the tissue from the colon of the mouse, including the proximal and distal regions. The cells were sonicated in lysis buffer (10 mM Tris, pH 7.4, 150 mM NaCl, 1 mM EDTA, 1 mM EGTA, pH 8.0, 1% Triton X-100) with 0.2 mM sodium ortho-vanadate, and protease inhibitor cocktail. The protein concentration was measured using the BioRad Reagent (BioRad, Hercules, CA, USA). Equal amounts of protein were separated by SDS-polyacrylamide gel electrophoresis, transferred to nitrocellulose, and immunoblotted with primary antibodies. Villin was used as an internal control for intestinal epithelial cells. Beta-actin was also used as a control for equal loading of proteins. The following antibodies were used: anti-Claudin-10 (Invitrogen, 38-8400, Carlsbad, CA, USA), anti-Claudin-7 (Invitrogen, 34-9100, Carlsbad, CA, USA), anti-Claudin-3 (Invitrogen, 34-1700, Carlsbad, CA, USA), anti-Claudin-4 (Invitrogen, 36-4800, Carlsbad, CA, USA), anti-Claudin-7 (Invitrogen, 34-9100, Carlsbad, CA, USA), anti-villin (Santa Cruz Biotechnology, SC-58897, Dallas, TX, USA) or anti-β-actin (Sigma-Aldrich, A5316, St. Louis, MO, USA) antibodies and were visualized by ECL (Thermo Fisher Scientific, 32106, Waltham, MA, USA). Membranes that were probed with more than one antibody were stripped before re-probing.
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9

Immunohistochemical Analysis of Tight Junctions

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Slides were deparaffinized, rehydrated and washed with PBS. Samples were incubated with 20% goat serum albumin for 30 minutes and then stained with rabbit anti-claudin-3, anti-claudin-4, anti-claudin-5, or anti-occludin (1:200, Thermo Fisher Scientific) overnight at 4° C. The next day, samples were washed with PBS, then incubated with 1:500 biotinylated anti-rabbit antibody for 1 hour at room temperature. After washing in PBS, the samples were incubated with 1:500 HRP streptavidin for 1 hour at room temperature. After washing in PBS, the samples were counterstained with DAB solution.
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10

Immunohistochemical Analysis of PDAC Spheroids

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Spheroids were fixed with 4% paraformaldehyde at 4°C overnight. After embedding, 5 ¼m sections were labeled with anti-E-cadherin (Roche, Basel, Switzerland, Cat# 760–4440) or anti-claudin-4 (Thermo Fisher, Cat#32–9400). For phalloidin staining, PDAC spheroids were frozen in optimal cutting temperature compound (Sakura, Torrance, Calif), and 5 ¼m sections cut using Leica CM 1850 cryostat (Leica, Wetzlar, Germany). These sections containing spheroids were stained with phalloidin (Alexa Fluor™ 488 Phalloidin, Thermo Fisher) and 4’,6-Diamidino-2-Phenylindole, Dilactate (Thermo Fisher, Cat#D3571).
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