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18 protocols using fla st

1

Culturing THP-1, HDF, and 293/hTLR5 Cells

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THP-1 cells (kindly gifted by Dr. Chang-Hee Suh, Ajou University, Medical Center, Suwon, Korea) were cultured in the RPMI 1640 medium (Gibco, BRL, Grand Island, NY, USA), supplemented with 1% of a penicillin/streptomycin solution (HyClone; Cytiva, Marlborough, MA, USA), and 10% of heat-inactivated fetal bovine serum (FBS; Thermo Fisher Scientific, Inc., Waltham, MA, USA). THP-1 cells were differentiated into macrophages using 80 nM phorbol 12-myristate 13-acetate (PMA; Sigma–Aldrich Co., St. Louis, MO, USA) for 24 h. Human dermal fibroblasts (HDFs; ATCC, Manassas, VA, USA) and 293/hTLR5 cell line ((InvivoGen, San Diego, CA, USA) were cultured in high-glucose Dulbecco’s modified Eagle’s medium (DMEM, Gibco, BRL, Grand Island, NY, USA) containing 1% of the penicillin/streptomycin solution (HyClone; Cytiva, Marlborough, MA, USA), 10% of FBS (Thermo Fisher Scientific, Inc., Waltham, MA, USA), and 0.2% of Normocin (InvivoGen, San Diego, CA, USA). All the cells were incubated in a humidified atmosphere containing 5% of CO2 at 37 °C (Thermo Fisher Scientific, Inc., Waltham, MA, USA). Lipofectamine 2000 was purchased from Thermo Fisher Scientific, Inc. (Waltham, MA, USA); FLA-ST from InvivoGen (San Diego, CA, USA); and TH1020 from Tocris (Cookson, Bristol, UK). FLA-AA (flagellin from A. avenae) was purified according to a previously described protocol [62 (link)].
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2

Immune Stimulant Compounds Protocol

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LTA-SA, FSL-1, FLA-ST, poly(I:C), LPS, R837, R848, CpG-A (ODN 2216) and CpG-B (ODN 2006) were purchased from Invivogen.
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3

Evaluating Intestinal Inflammation and Permeability

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Mice were injected i.p. with 200μL/mouse of Fla-ST (Invivogen) or Fla-C in PBS at varying doses, as indicated in the Figure Legends. Negative control mice were i.p. injected with an equal amount of sterile PBS. Mice were injected either at weaning to measure IL-22 from colon and ileum explants harvested 2h post injection, or on days 1, 3 and 5 post weaning prior to assay for permeability to FITC-dextran on day 6. The concentration of CXCL1 and IL-6 was examined by ELISA using serum collected from 5–6-week old mice 2h after injection with 200μL/mouse of Fla-C (25 μg/mL) or Fla-ST (25 μg/mL)/PBS as reported previously.30 (link),33 (link)
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4

Immune Cell Stimulation Assay

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Ob and Ocy were stimulated with Pam3CSK4 (100 ng/mL), Pam2CSK4 (100 ng/mL), ultrapure LPS from E. coli (100 ng/mL), FLA-ST (100 ng/mL), or single-strand RNA (100 ng/mL) (InvivoGen).
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5

Anti-CD3 and Flagellin Stimulation

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CBBP-reconstituted or SPF WT mice were injected i.p. with either anti-CD3 antibody antibody (145–2C11, 100 μg, BioXCell) or ultrapure flagellin (FLA-ST, 2.5 μg, InvivoGen) resuspended in 200 μl of PBS and sacrificed at the indicated time points.
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6

Immune Modulator Agonists in Cancer

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TLR1/2 agonist Pam3CSK4 (tlrl-pms), TLR2/NOD2 agonist CL429 (tlrl-C429), TLR2/4 agonist lipopolysaccharide (LPS)-EB (LPS from Escherichia coli O111:B4, tlrl-eblps), TLR4 agonist Monophosphoryl Lipid A (MPLA) Synthetic (tlrl-mpls), TLR5 agonist FLA-ST (flagellin from Salmonella typhimurium, tlrl-stfla), TLR7 agonists imiquimod (R837, tlrl-imqs) and gardiquimod (tlrl-gdqs) were purchased from InvivoGen (California, USA). TLR7/8 agonist resiquimod (R848, SML0196), IPP triammonium salt solution (I0503), and ZOL (1724827) were purchased from Sigma-Aldrich (Missouri, USA). Antihuman PD-1 antibody, pembrolizumab (Keytruda, Merck & Co, New Jersey, USA; R014267), was stored at −80°C at 25 mg/mL before use. MyD88 inhibitor ST-2825 was purchased from MedChemExpress (New Jersey, USA). mTOR inhibitors torin1 (S2827; Selleck Chemicals, Texas, USA) and rapamycin (NC9362949, LC Laboratories, MA, USA) were described previously.17 (link)
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7

Evaluating duck fibroblast responses to immune stimuli

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The duck embryo fibroblasts (DEFs) were grown in complete Eagle’s Minimum Essential Medium (ATCC, Virginia, VA) supplemented with 10% fetal bovine serum (FBS) (Gibco, Grand Island, NY) [16 (link)]. The mimicking stimulations used in this study included LPS (InvivoGen, San Diego, CA), 5′ppp dsRNA (InvivoGen), Pam3CSK4 (InvivoGen), FLS-1 (InvivoGen), FLA-ST (InvivoGen) and R848 (Sigma, St Louis, MO). Six-well plates were used to seed DEFs until 70–80% confluency. Then DEFs were treated with the above mimicking stimulations. Cells were harvested after 24 h treatment and analyzed by RT-qPCR.
To further analyze the effect of 5′ppp dsRNA on the dynamic expression of duTRIM25, DEFs were seeded in six-well plates and raised to 70–80% confluency. The cells were transfected with 5′ppp dsRNA using Lipofectamine 2000 (Invitrogen, Carlsbad, CA) as specified by the manufacturer and then collected after 0, 3, 6, 9, 12 and 24 h of treatment. RT-qPCR was used to calculate duTRIM25 mRNA expression at different time points.
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8

Mucosal and Parenteral Immunization with Ovalbumin and Adjuvants

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Ovalbumine (OVA) is a commonly used antigen in order to assess adjuvant activity [19 (link),32 (link)]. In two distinct assays, a total of fourteen mice per group received intra-rectally (IR) 20μg of ovalbumin (ovalbumin grade VII, Sigma) with 7μg of adjuvant, either cholera toxin (CT) (List Biological Laboratories, INC), or FLA-ST (Standard flagellin from S. Typhimurium, Invivogen, France), or purified recombinant FliC. A control group of 14 mice received 20μg of ovalbumin in phosphate-buffered saline (PBS). In addition, to compare IR (mucosal) immunization with IP (parenteral) route of immunization with FliC, a group of eight mice received 20μg of ovalbumin with 7μg of purified recombinant FliC intraperitoneally (IP). Each group of mice received 3 identical doses: a first one on day 0, a second dose on day 15 and a last dose on day 30. At day 45, mice were humanely euthanized (guidelines of the "Animal Welfare Committee of the Université Paris Sud") for blood and intestinal content sampling and cell isolation from intestinal lamina propria.
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9

Priming and Stimulating Intestinal Epithelial Cells

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7 days following plating of crypts, IEC cultures were primed or not with 20 ng/ml of species-specific human interferon gamma (IFNγ) (Invivogen, San Diego, CA, USA) or mouse IFNγ (Thermo Fisher Scientific) for 12 h after which IEC cultures were stimulated or not with 1 μg/ml of ultrapure TLR agonists (FSL1 [TLR2/6], Pam(3)CSK(4) [TLR 2/1], LPS [TLR4], ODN-2395 [TLR9], LPS [TLR2], and FLA-ST [TLR5]) (Invivogen). Culture supernatants were collected 6 h following TLR agonist stimulation to evaluate soluble mediator expression.
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10

Biochemical Inhibition of NLRP3 Inflammasome

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All chemicals and reagents were purchased from Sigma (St. Louis, MO, USA) and Invitrogen (CA, USA) unless specified otherwise. ATP, N-acetyl-L-cysteine (NAC), diphenyleneiodonium chloride (DPI), U73122, BAPTA-AM, Glyburide, Bay 11-7082, and sp600125 were all from Sigma. Monosodium urate (MSU) was from Invitrogen. Gallein was from Tocris Bioscience (Bristol UK). U0126 was from Promega (Madison, WI, USA). SB203580 was from Cayman Chemical (Ann Arbor, MI, USA). z-YVAD-fmk (ALX-260-074) and Ac-YVAD-CHO (ALX-260-027) were from Enzo Life Sciences (Farmingdale, NY, USA). Muramyl dipeptide (MDP), Pam3CSK4, FLA-ST, and LPS-B5 Ultrapure were obtained from InvivoGen (San Diego, CA, USA). AZD9056 was from MedChemExpress (Princeton, NJ, USA). Monoclonal antibodies (mAbs) used for Western blotting included: anti-caspase-1 (D3U3E) and anti-human IL-1β (D7F10) were obtained from Cell Signaling Technology (Beverly, MA, USA); anti-ASC (AL177) was from AdipoGen (San Diego, CA, USA); anti-NLRP3 (ALX-804-819) was from Enzo Life Sciences; Anti-β-actin mAb was purchased from BD Biosciences (San Jose, CA, USA). Anti-GAPDH mAb was from Proteintech (IL, USA). Abs used for cell stimulation (2A1 and mouse IgG1 control) and for the detection of signaling molecules have been described previously (24 (link)).
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