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8 protocols using sc 65514

1

Hippocampal Progenitor Visualization and Analysis

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The detailed procedure is shown in Supplemental 1.6. Briefly, hippocampal sections were made and subjected to immunohistochemical (IHC) detection of proBDNF (1:100, Santa Cruz, sc-65514), and immunofluorescence (IF) detection of c-Fos (1: 200, Cell Signaling Technology, #2250). Immunoreactivities were visualized using 3, 3′-diaminobenzidine-IHC- and fluorescein -IF-Detection Kit (Sangon Biotech, Shanghai, China) according to the manufacturer's instructions. Stained slides were digitized with a confocal laser scanning microscope system (ZEISS, Germany), and analyzed with Image-Pro Plus software (Media Cybernetics, USA) by pathologists blinded to the experimental parameters.
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2

Quantifying Epigenetic Markers in Prefrontal Cortex

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Immunofluorescence was conducted27 (link) to measure the expression of 5-mC, MeCP2 in neuron cells in the PFC. Primary antibodies raised against NeuN (mouse, 1:500, MAB377; Chemicon International, Inc, Temecula, CA), 5-mC (rabbit, 1:500, #28692; Cell Signaling Technology, Beverly, MA), MeCP2 (rabbit, 1:1,000, #3456; Cell Signaling Technology), and brain-derived neurotrophic factor (mouse, 1:10, sc-65514; Santa Cruz Biotechnology, Santa Cruz, CA) were diluted in 1× PBST(phosphate buffered saline (PBS) + 0.3% Triton X-100) supplemented with 0.3% bovine serum albumin. The plates were wrapped in aluminum foil to block light and then stored at 4°C for 72 hours. The tissue sections were sequentially incubated for 1 hour with a mixture of Alexa Fluor 488-conjugated donkey anti-mouse secondary antibody (1:1000; Thermo Fisher Scientific, Fremont, CA) and Alexa Fluor 594-conjugated donkey anti-goat secondary antibody (1:2000; Thermo Fisher Scientific). Cell counting (NeuN/5-mC and/MeCP2) was performed using a square grid (300 × 300 μm) in the PFC.
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3

Quantifying NGF and BDNF Levels in Biological Fluids

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The expression levels of mature precursor forms of NGF and BDNF were analyzed by WB in tears and serum samples. Briefly, equal protein amounts were loaded on a 10% SDS-PAGE gel and electrophoretically transferred to nitrocellulose membranes later blocked in low-fat milk (10% in Tris buffer and 0.1% Tween-20) and washed three times for 10 min each at RT in TBS-T. Samples were exposed to the primary anti-NGF (1:1000, sc-365944, Santa Cruz Biotechnology, Dallas, TX, USA) and anti-proBDNF (1:1000, sc-65514, Santa Cruz Biotechnology, Dallas, TX, USA) antibodies for 1 h at room temperature (RT) on a shaker.
The blots were washed and incubated for 1 h with anti-rabbit or anti-mouse horseradish peroxidase conjugated antibody (Biorad, California, USA, #1706515 and #1706516, respectively) at RT on a shaker. Immunoblot analyses were performed using a chemiluminescence detection kit (ECL) as the chromophore (ECL system RPN2232 Amersham Bioscience, UK) and exposed to Hyperfilm (Amersham Hyperfilm ECL 28906837, Amersham, UK). The integrate density (ID) of the bands was recorded and quantified by the public domain image Fiji (2.9.0, ImageJ, NIH, Baltimore) Image processing and analysis program. Data are expressed as arbitrary units (a.u.).
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4

Hippocampal BDNF Protein Analysis in Mice

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Mice were sacrificed by decapitation immediately after FST, the hippocampus was quickly isolated from brain. The hippocampus was homogenized in RIPA buffer containing protease inhibitor (Thermo Scientific, Waltham, MA, USA). The quantified proteins were separated by electrophoresis on 10% SDS-polyacrylamide gel electrophoresis (PAGE) and transferred onto polyvinylidene fluoride (PVDF) membranes (Millipore, Billerica, MA, USA). The membranes were blocked for 1 h at room temperature using 4% skimmed milk in Tris-buffer saline and probed overnight at 4 °C with primary antibodies raised against pro-BDNF (brain-derived neurotrophic factor) (1:1000 dilution, sc-65514, Santa Cruz Biotechnology, CA, USA). The membranes were incubated with the horseradish peroxidase-linked secondary antibody for 2 h. Then, immunoreactive proteins were detected by imaging systems; chemiluminescence (LI-COR Biosciences, Lincoln, NE, USA) and determined using the ImageJ software (NIH, Bethesda, MD, USA).
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5

Quantitative Analysis of Mature and Precursor BDNF

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Forty micrograms of total protein lysate was separated on a 15% SDS protein gel with a Kaleidoscope-prestained protein standard (Bio-Rad). Blots were blocked in 5% non-fat dry milk and incubated in primary antibody (mature BDNF, Abcam, Catalog #ab108319 used at 1:5000 and secondary at 1:5000; proBDNF, Santa-Cruz Biotechnology, Catalog #sc-65514 used at 1:500 and secondary at 1:5000) for 24 hours at 4°degrees celsius. Blots were incubated in horseradish peroxidase-linked IgG-conjugated secondary antibody for 1 hour. Protein bands were visualized by chemiluminescence solution (Western Lightening, Perkin Elmer Life Sciences). Band at 15kDa was quantitated for mature BDNF, and band at 28kDa was quantitated for proBDNF. GAPDH (37 kDa; Abcam, Catalog# Ab22555 used at 1:20000 and secondary at 1:30000) was used as a loading control.
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6

Western Blot Analysis of Hippocampal Proteins

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The total hippocampus protein was extracted by RIPA lysis buffer containing 1 mM phenylmethanesulfonyl fluoride (PMSF) on ice and quantified using a BCA protein assay kit. Each sample (30 µg total protein) was separated by 12% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred onto polyvinylidene fluoride (PVDF) membranes. The membranes were blocked with Tris-buffered saline containing 5% skim milk for 2 h at RT and incubated with primary antibodies at 4 °C overnight. Subsequently, the membranes were washed three times with TBST (0.1% Tween-20) and incubated with HRP-labeled secondary antibodies for 2 h at RT. The bands were detected using an enhanced chemiluminescence (ECL) system and analyzed by Image J Software. The primary antibodies used were as follows: iNOS (1:500, sc-7271, Santa Cruz, CA, USA), CD206 (1:500, sc-70586, Santa Cruz, CA, USA), GFAP (1:500, sc-33673, Santa Cruz, CA, USA), C3 (1:500, sc-28294, Santa Cruz, CA, USA), proBDNF (1:500, sc-65514, Santa Cruz, CA, USA), TrKB (1:500, sc-377218, Santa Cruz, CA, USA), BDNF (1:1000, 28205-1-AP, proteintech, Wuhan, China), p75 (1:500, sc-271708, Santa Cruz, CA, USA) and β-actin (1:1000, #4967, CST, Danvers, MA, USA). The secondary antibodies were HRP-conjugated anti-mouse (1:1000, #7076, CST, MA, USA) and HRP-conjugated rabbit (1:1000, #7074, CST, MA, USA).
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7

Immunoblotting of Frozen Hippocampi

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Frozen hippocampi were pulverized in lysis buffer (20 mM Tris-HCl, pH 7.65, 150 mM NaCl, 1 mM EDTA, 1 mM EGTA, and 1% Triton) supplemented with 1× protease and phosphatase inhibitor cocktail (78443; Thermo Fisher Scientific). Lysates were clarified by centrifugation, and protein concentration was determined using a Bradford assay. Clarified samples were heated at 65°C in Laemmli buffer for 5 min. Proteins were run on an SDS-PAGE gel and transferred to nitrocellulose membrane (1620112; Bio-Rad). Membranes were blocked with TBST-5% BSA for 1 h, incubated with primary antibody overnight at 4°C, and probed with HRP-conjugated antibodies for 1 h at room temperature. The following antibodies were used in these studies: anti-TIMP2 (1:1,000; D18B7; Cell Signaling), anti–α-tubulin (1:5,000; T6199; Sigma-Aldrich), anti-b2 microglobulin (1:1,000; ab75853; Abcam), antitransferrin (1:1,000; ab82411; Abcam), anti-Gpr158 (1:1,000; ABIN486340; Antibodies-online), anti-Na,K ATPase (1:1,000; 3010S; Cell Signaling), anti-SR2C (1:1,000; sc-17797; Santa Cruz), anti-Gaq (1:1,000; D5V1B; Cell Signaling), anti-BDNF (1:100; sc-65514; Santa Cruz). Band intensities were quantified using ImageJ software. Dashed lines separating two bands indicate that these bands are on the same membrane but are not adjacent.
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8

Hippocampal BDNF Expression Quantification

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Immunohistochemical detection of proBDNF (1:100, sc-65514, Santa Cruz Biotechnology Inc., Texas, USA), and immunofluorescence detection of mature BDNF (1:200, A4873, ABclonal Technology, Wuhan, China) on the hippocampal sections (4 μm) were performed as previously described. The target proteins were quantified using Image-Pro Plus software (Media Cybernetics Inc., Rockville, Maryland, USA).
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