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14 protocols using ab233482

1

Protein Analysis of XL888-Treated Cells

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Following a 48 hour treatment with XL888, cells were collected and protein was extracted using RIPA lysis buffer together with 1% phosphatase inhibitor and 1% protease inhibitor. The Pierce™ BCA Protein Assay Kit (23227) from Thermo Fisher Scientific (Carlsbad, CA, USA) was used to determine protein concentration. Western blots were performed as described. (25 (link)) Primary antibodies for pSTAT3 (9145 L), STAT3 (4904 S), pERK (4377 S), tERK (4695 S), Hsp27 (50353), Hsp70 (4872), β-actin (4967 S) and secondary anti-Rabbit (7074 S), or anti-Mouse (7076 S) antibodies were purchased from Cell Signaling Technology, Inc. (Danvers, MA, USA). Primary antibody for α-SMA (MA137027) was purchased from Thermo Fisher Scientific, Inc. (Carlsbad, CA, USA).Primary antibody for murine PD-L1 was purchased from Abcam (ab233482).
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2

Protein Expression Analysis in GC Tissues

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GC tissues or cells were collected, and the total protein was extracted by radioimmunoprecipitation assay (RIPA) lysis buffer (Beyotime Biotechnology, Shanghai, China). The protein concentration was determined using a bicinchoninic acid (BCA) kit (20201ES76, Yeasen Biotechnology, Shanghai, China). Quantification was performed according to different concentrations. Following separation with the use of polyacrylamide gel electrophoresis, the protein was transferred onto a polyvinylidene fluoride membrane (IPVH85R, Millipore, Darmstadt, Germany), which was then blocked with 5% bovine serum albumin (BSA) for 1 h at room temperature. Next, the membrane was incubated with primary rabbit antibodies (Abcam, Cambridge, UK) to CXXC4 (ab105400, 1:100), ERK (ab184699, 1:10,000), phosphorylated ERK (ab79483, 1:1,000), PD-L1 (ab233482, 1:100), and GAPDH (ab128915, 1:10,000) overnight at 4°C. The following day, the membrane was cultured with horseradish peroxidase (HRP)-labeled goat anti-rabbit immunoglobulin G (IgG) (ab205718, 1:20,000, Abcam, Cambridge, UK) for 1 h at room temperature. The membrane was visualized using the developing solution. Protein quantitative analysis was conducted using ImageJ 1.48u software (National Institutes of Health) and expressed as the gray value ratio of each protein to the internal reference GAPDH.
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3

Evaluating Protein Expression in Transfected COS7 Cells

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After transfection with double-gene plasmids, COS7 cells were cultured at 37 °C for 4 h, and then changed to fresh DMEM containing 10% FBS. A plasmid-free negative control group was established. Cells were collected for test 48 h after transfection. The cells were mixed within ice-precooled protein lysates (l mM PMSF, pH7.4), broken up by ultrasonic cracker, centrifuged at 4 °C, 12000 rpm for 15 min, and the supernatant was taken for loading sample preparation and Western blotting assay. Antibodies used: anti-4-1BBL mouse monoclonal antibody (sc-398933, Santa cruz, 1:1000), anti-CEACAM6 rabbit monoclonal antibody (ab235139, Abcam, 1:1000), anti-PD-L1 rabbit polyclonal antibody (ab233482, Abcam, 1:1000), and anti-GAPDH mouse monoclonal antibody (ab125247, Abcam, 1:5000), and secondary antibodies (Beyotime Biotechnology). The follow-up WB method was as reported [36 (link)].
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4

Quantifying Tumor Immune Profiles

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To assess in vivo immunomodulatory effects, tumor
sections from primary tumors gathered across various treatment groups
were subjected to immunofluorescence staining against PD-L1, CD3 or
GrB. In brief, tumor sections were first deparaffinized and then subjected
to heat-mediated antigen retrieval, following a previously published
protocol.55 (link) Subsequently, tumor sections
were blocked with 3% BSA for 30 min and stained overnight at 4 °C
using the following antibodies: anti-PD-L1 antibody (ab233482, 1:100,
Abcam), anti-CD3 antibody (GTX 16669, 1:50, GeneTex, Irvine, CA, USA)
or Anti-GrB antibody (14-8822-82, 1:200, eBioscience, San Diego, CA,
USA). Afterward, the tumor sections were stained with Alexa Fluor
488-conjugated goat antirabbit (ab150077, 1:1000, abcam) for PD-L1
and CD3 or Alexa Fluor 488-conjugated goat antirat antibodies (ab150157,
1:1000, abcam) for GrB, respectively for 1 h at 25 °C. The resulting
images were then captured using a fluorescence microscope (Axio Observer
7).
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5

Immunohistochemical Analysis of FFPE Samples

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Formalin-fixed paraffin-embedded (FFPE) samples from 13 patients with adequate archival tissue were analyzed by immunohistochemistry. Samples were stained for CD4 (Rabbit polyclonal; VWR, 102158-736), CD8 (Rabbit polyclonal; Abcam, ab4055), and PD-L1 (Rabbit polyclonal; Abcam, ab233482) and scanned on a Nanozoomer 2.0HT whole-slide scanner (Hamamatsu Photonic K.K). Percent-positive area was quantified in FIJI.
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6

Culturing Human and Murine Ovarian Cancer Cell Lines

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Human ovarian carcinoma cell lines A2780 and SK-OV-3 were obtained from Sigma-Aldrich (Saint-Quentin Fallavier, France) and the American Type Culture Collection (ATCC, Manassas, VA, USA), respectively. A2780 and SK-OV-3 cells were respectively maintained in RPMI 1640 medium containing 2 mM L-Alanyl-Glutamine (GlutaMAXTM-I, Gibco, Life Technologies, Saint-Aubin, France) and McCoy’s 5a medium modified (ATCC) supplemented with 10% heat-inactivated fetal bovine serum (FBS). ID8 mouse OC cell line was obtained from Dr. Katherine Roby (University of Kansas Medical Center) [41 (link)]. ID8 cells were maintained in high-glucose Dulbecco’s Modified Eagle’s Medium (#D6429, Sigma-Aldrich, Saint-Quentin Fallavier, France) supplemented with 4% FBS, 1% penicillin/streptomycin and insulin–transferrin–sodium selenite media supplement (ITS mix, #I1884, Sigma-Aldrich). Constitutive expression of TSP-1 and PD-L1 by ID8 cell line under unstimulated conditions was ensured by Western blot, using anti-TSP-1 (#ab1823; 1:1000 dilution) and anti-PD-L1 (#ab233482; 3 µg.mL−1) antibodies from Abcam. Cells were cultured in growth medium and split every 3 to 4 days by harvesting in trypsin. Authenticated cell lines by provider were stored at early passages (< 3) in liquid nitrogen, controlled to be mycoplasma-free, and were used in the experiments for no longer than 6 months.
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7

Immunohistochemical Analysis of Tumor Microenvironment

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Mice were sacrificed on indicated days. Tumor tissues were completely dissected, fixed in 4% buffered paraformaldehyde, embedded in paraffin, and were subsequently cut into 5-µm-thick sections. The sections were dewaxed and then placed in citric acid buffer (PH 6.0) for microwave antigen retrieval. Endogenous peroxidase of sections was then blocked with 3% hydrogen peroxide solution. Sections were further blocked with 3% bovine serum albumin blocking solution (Sigma) and immunostained with rabbit anti-mouse PD-L1 (ab233482), rabbit anti-mouse α-smooth muscle actin (SMA) (ab5694), rabbit anti-FN1 (ab2413), rabbit anti-CDH1 (ab76319) and rabbit anti-Ki-67 (ab15580) purchased from Abcam, UK at 4 ℃ overnight. The sections were then washed well with phosphate buffered saline with Tween-20 (PBST) and incubated with goat anti-rabbit IgG secondary antibody (ab150077, abcam) at room temperature for 1 hours. After being washed with PBST, staining was developed with DiAminoBenzidine. Slides were counterstained with hematoxylin, dehydrated, and finally mounted. These sections were observed under a microscope and were measured by using Image-pro Plus 6.0 software.
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8

Quantification of PD-L1 and CTLA4 in Organoid Cultures

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Matrigel domes were broken by mixing them 20 times in 1 mL cold phosphate-buffered saline (PBS) using a P1000 pipette. Content was then transferred into a 15 mL conical tube on ice. Wells were washed with cold PBS (about 1 mL) to capture any remaining organoid pieces. Tubes were centrifugated at 290 g for 5 min at 3–8°C. Once the Matrigel has been eliminated, the supernatant was discarded and RIPA lysis buffer containing protease inhibitor cocktail (#4693116001, Roche) was added. Whole-cell lysates were quantified using a BCA protein assay kit (#23227, ThermoScientific). Twenty micrograms of total protein were used. The blots were probed with primary antibodies against PD-L1 (#ab233482, Abcam) or CTLA4 (#ab237712, Abcam), and beta-actin (#4970, Cell Signaling). ECL-Plus kit was used as a chemiluminescence substrate (#32132, ThermoScientific), and detection was performed using the ChemiDoc MP system (Bio-Rad).
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9

Targeting PD-L1 in Traumatic Brain Injury

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TBI damages the BBB, enabling recruitment of circulating immune cells, such as M/Mɸ, neutrophils, and activated T cells to the injured site. We also took advantage of the injury-induced transient breakdown of the BBB to study whether administration of PD-L1 blocking antibody (Ab) via subcutaneous (SC) injection could reach the injured site of the brain to exert its blocking function. Previous studies have shown that a single dose of anti-PD-L1 Ab (50 μg/kg or 200 μg/kg) via intravenous or intraperitoneal injection can significantly affect stroke outcome through regulating CNS inflammation [37 (link), 38 (link)]. In our study, mice at 24 h post-TBI were subcutaneously injected with either PD-L1 blocking Ab (ab233482, Abcam, Cambridge, MA), PD-L1-Alex 647-conjugated Ab (ab224030, Abcam, Cambridge, MA), or an irrelevant IgG Ab as a control at 200 μg/kg in 100 μL PBS. PD-L1-Alex 647-conjugated Ab was used for histological examination of Ab penetration into the brain, while PD-L1 blocking Ab was used to study the PD-L1 function in the brain. The treatments were blinded to researchers who performed histological evaluations, behavior tests, and flow cytometry.
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10

Radiolabeling of Anti-PD-L1 Antibody for Cancer Imaging

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For probe synthesis, an anti-PD-L1 monoclonal antibody (atezolizumab) was obtained from MedChemExpress (USA). Human IgG (H+L) was obtained from Sangong Biotech (Shanghai, China). A PD-1 mAb (SHR-1210) was obtained from Suncadia Biopharmaceuticals (Suzhou, China). For Western blotting and IHC, an anti-PD-L1 antibody (ab233482) was purchased from Abcam. Diethylenetriaminepentaacetic acid dianhydride (DTPAA, 95%) and gadolinium (III) chloride hexahydrate (99.9%) were purchased from Alfa Asear. Human serum albumin (HSA) was purchased from Beyotime Biotechnology (Shanghai, China). N-(3-dimethylaminopropyl)-N’-ethylcarbodiimide hydrochloride (EDC•HCl) and N-hydroxysuccinimide (NHS) were purchased from Energy Chemicals (Shanghai, China). NHS-PEG2000-COOH was purchased from Aladdin (Shanghai, China).
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