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10 protocols using h3 thymidine

1

Hypoxia Effects on CD4+ T Cell Proliferation

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Isolated CD4+ T cells were stimulated and cultured in DMEM 1X (no glucose, no glutamine) with 5% NaHCO3, 10% dialyzed FBS, 14 mM D-glucose and indicated amounts of L-Glutamine. Ten thousand cells were incubated in 100 μl of media under hypoxia (O2 = 1%) or normoxia (O2 = 20%) for 72 hours during which H3-thymidine (1μCi/well; PerkinElmer,Boston,MA,USA) was added to the media for the last 12 hours of incubation. H3-thymidine incorporation on the 72nd hour was obtained using a Wallac MicroBeta Counter (Perkin Elmer).
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2

Hypoxia Modulates T Cell Proliferation

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Isolated CD4+ T cells were stimulated and cultured in DMEM 1× (no glucose, no glutamine) with 5% NaHCO3, 10% dialyzed FBS, 14 mM d-glucose or RPMI 1640 (Sigma–Aldrich) supplemented with 10% heat inactivated FBS (Sigma–Aldrich); 2 mM glutamine (Sigma–Aldrich) 0.5% Penicillin-Streptomycin (Sigma–Aldrich). 5 × 106 T cells were incubated in 150 μl of media under hypoxia (O2 = 1%) or normoxia (O2 = 21%) for 72 h during which H3-thymidine (1 μCi/well; PerkinElmer, Boston, MA, U.S.A.) was added to the media for the last 12 h of incubation. H3-thymidine incorporation on the 72nd hour was counted using a Wallac MicroBeta Counter (PerkinElmer).
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3

B Cell Proliferation Assessment

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For assessment of proliferation, B cells were resuspended at 50,000 cells per mL in the presence of anti-CD40 (2μg/mL) and IL-4 (10ng/mL) for 72 hours. After this period, [H3]-thymidine was pulsed at a concentration of 1μCi/well for the final 24 hours (Perkin Elmer). Plates were harvested using a Filtermate cell harvester onto GFC plates. Assays were read using a Topcount Plate Counter (Perkin Elmer).
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4

Isolation and Evaluation of MDSC Subsets

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MDSCs were isolated from the peritoneal cavities of BALB/c mice at 12 h after the transplantation of endometrial implants, and G-MDSCs and M-MDSCs were sorted from the peritoneal MDSC samples by MoFloAstrios EQ Cell Sorter (Beckman Coulter, Brea, CA, USA) (Supplementary Fig.9). The purity of sorted MDSC subsets was greater than 95%. MDSCs, G-MDSCs and M-MDSCs were cultured in 96-well round bottom plates in the presence of different ratios with 5×105 purified T cells stimulated with 4 mg/mL Con A (Sigma-Aldrich, St. Louis, MO, USA). The cells were cultured in 200 μL of RPMI-1640 medium supplemented with 10% FBS, 10mM HEPES, 1mM penicillin–streptomycin and 50 mM β-mercaptoethanol (Invitrogen, Carlsbad, CA, USA) at 37°C in a 95% humidified incubator with 5% CO2. After culture for 72 h, 10 μCi of [H3]-thymidine (Sigma-Aldrich, St. Louis, MO, USA) was added to each well. After culture for additional 12 h, the cells were collected by cell harvester and the incorporation of [H3]-thymidine was detected in MicroBeta2 Plate Counter (Perkin Elmer, Waltham, MA, USA).
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5

Cell Proliferation Measurement Protocol

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Cells were pulsed with [H3]thymidine (1μCi/well) (Perkin Elmer Life and Analytical Sciences, Boston, MA) for the last 18 hours of culture. Incorporation of [H3]thymidine was measured by β-scintillation counting (Micro β counter, Perkin Elmer), and the incorporation data were expressed as mean count per minute (cpm).
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6

Kinetics of Virus Infection in Sorted Cells

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A cell monolayer was grown in tissue culture dishes (Falcon) for 3 days then infected with MC-RckGFP strain at a MOI of 100:1 for 1 h at 37°C in cell culture medium. After the infection, cells were sorted using flow cytometry. GFP− and GFP+ sorted cells were seeded at a density of 1.5 × 105 cells/ml in culture medium containing inactivated 10% FBS, 10 μg/ml gentamicin and H3-thymidine at 1 μCi/3.76 × 104 Bq (PerkinElmer). The cells were maintained for 90 min, 3 h, 6 h, or 24 h at 37°C in a humidified atmosphere at 5% CO2 followed by scintillation counting (Packard 1600 TR meter, Meriden, CT) (Olivier et al., 2012 (link)).
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7

T Cell Proliferation Assay with B16 Melanoma

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105 splenocytes of C57BL/6J mice previously treated as described in Figure 3A (BD Biosciences, San Jose, CA, USA; ref. 145-2C11) in the presence of 1 × 104 B16 or B16-MRP1-irradiated melanoma cells. The coculture was incubated for 72 h in U-bottom 96-well plates (BD Biosciences, San Jose, CA, USA; ref. 353077). 0.5 μCi of H3 thymidine (PerkinElmer, Boston, MA, USA; ref. NET027E005MC) was added overnight and measured by scintillation.
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8

Myeloid Cell-Mediated Modulation of T Cell Responses

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Myeloid cells (BM-MCs or BM-MCregs) were cultured with responder spleen cells from antigen-specific T cell receptor transgenic (TCR Tg; where antigen was either OVA323-339 or MOG35-55) or Foxp3EGFP mice as indicated. To assess T cell proliferation co-cultures were stimulated with anti-CD3 (BD Bioscience), T cell-receptor specific antigen MOG35-55 (Bio Matic) or T cell-receptor specific antigen OVA 323–339 (Anaspec). To assess the effects of myeloid cell activation, co-cultures were stimulated with LPS from Escherichia coli, 055:B5 (Sigma-Aldrich) for 96 hours, pulsed with (H3 thymidine) (Perkin Elmer Life Sciences or MP Biomedicals) in the last 18 hours, harvested and counted, data is expressed as counts per million (cpm) ± SEM [35 (link)].
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9

Isolation and Characterization of Bone Marrow-Derived Dendritic Cells for T Cell Proliferation Assay

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Bone marrow-derived dendritic cells (BMDCs) were isolated from tibias and femurs of 8-week-old female C57/BL6 mice.37 (link) Cells were cultured in the presence of granulocyte-macrophage colony stimulating factor (GM-CSF; Invitrogen, CA USA) (10 ng/mL) for 6 days, to induce differentiation of DCs.37 (link) For the proliferation assay, freshly isolated CD4+ T cells from lymph node cells of OT-II transgenic mice (kindly provided by Dr C. Lowell, University of California, USA) were co-cultured with LPS (100 ng/mL)-stimulated DCs and 1 μg/mL with OVA323-339 peptide (Genomics, Taiwan) at 1:4 DCs/T cell ratio by measuring uptake of [3H]-thymidine (Amersham Pharmacia Biotech, New Jersey, USA) in TopCount (PerkinElmer Life Sciences, Palo Alto, CA, USA).38 (link) T cell proliferation of splenocytes was measured by [H3]-thymidine as described above.
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10

Isolation and Activation of DO11.10 T Cells

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DO11.10 T cells were isolated using magnetic bead selection (Miltenyi Macs)B220+, CD11b+ and CD11c+ cells were depleted and then CD4 positive T cells were isolated using L3T4, non-activating selection. Bexosomes (15–20 µg/100 µL) were added to 1×105 DO11.10 T cells in a final volume of 200 µL cRPMI/well in 96 well plates; TNP or DNP-OVA was added in indicated amounts. After 96 hours, cells were pulsed with 1 µCi/well of [H3]-thymidine for 24 hours (Perkin Elmer). Plates were then harvested using a Filtermate cell harvester onto GFC plates. Assays were read using a Topcount Plate Counter (Perkin Elmer, Waltham, MA).
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