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4 protocols using dmem high glucose medium

1

Culturing Mouse Embryonic Stem Cells

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Wild-type (WT) mESCs derived from inbred mice (Bruce 4 C57BL/6 J, male, EMD Millipore, Billerica, MA, USA) and other knock-in derivatives were cultured as described previously32 (link). C57BL/6NCr (male) mESCs17 (link) were used as Sox2 STREAMING-tag knock-in cells. Briefly, all mESC lines were maintained in 2i medium (Dulbecco’s modified Eagle’s medium [DMEM, Wako, Osaka, Japan, 197-16275]; 15% fetal bovine serum [FBS, GE Healthcare, Little Chalfont, UK, SH30396.03]); 0.5 mM monothioglycerol solution [Wako, 195-15791]; 1×MEM nonessential amino acids [Wako, 139-15651]; 2 mM L-alanyl-L-glutamine solution [Wako, 016-21841]; 1,000 U/mL leukemia inhibitory factor [Wako, 195-16053]; 20 µg/mL gentamicin [Wako, 078-06061]; 3 µM CHIR99021 [Cayman Chemical, Ann Arbor, MI, USA, 13122]; and 1 µM PD0325901 [Chemscene, Monmouth Junction, NJ, USA, CS-0062]) on a 0.1% gelatin (Sigma-Aldrich, St. Louis, MO, USA, G1890-100G)-coated dish at 37 °C and 5% CO2. The cell lines used in this study are listed in Supplementary Data 1.
HeLa cells (CCL-2, ATCC) were grown in DMEM high-glucose medium (Nacalai Tesque, Kyoto, Japan) containing 10% FBS (Gibco, Grand Island, NY, USA) and 1% L-glutamine–penicillin–streptomycin solution (GPS; Sigma-Aldrich, St. Louis, MO, USA) at 37 °C in a 5% CO2 atmosphere.
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Cell Culture of HeLa and 293FT

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HeLa cells were maintained in DMEM High Glucose medium (Nacalai Tesque) supplemented with 10% FBS (Biosera), 1 × MEM Non-Essential Amino Acids Solution (Thermo Fisher Scientific) and 1 mM sodium pyruvate (Sigma). 293FT cells were maintained in DMEM High Glucose medium supplemented with 10% FBS, 1 × MEM Non-Essential Amino Acids Solution, 1 mM sodium pyruvate and 2 mM (1 ×) l-Glutamine (Thermo Fisher Scientific).
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Cell Culture Protocols for Neuroblastoma

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The human neuroblastoma cell lines (NB1, NB39-nu, IMR32, and SH-SY5Y) were provided by A. Nakagawara, T. Ushijima, and N. Hattori. HCT116 cells were provided from B. Vogelstein. TIG-7 and PC3 cells were provided from JCRB (Japan). H3122 cells were provided from W. Pao. SUP-M2 cells were provided from DSMZ (Germany). NB1, NB39-nu, IMR32, SH-SY5Y, PC3, H3122 and SUP-M2 cells were cultured in RPMI-1640 medium (Nacalai Tesque, Japan) supplemented with 10% foetal bovine serum (GIBCO, USA) and 100 U/mL penicillin/streptomycin (Sigma-Aldrich, Germany) at 37 °C in a 5% CO2 atmosphere. HCT116 and TIG-7 cells were cultured in DMEM (high-glucose) medium (Nacalai Tesque, Japan) supplemented with 10% foetal bovine serum and 100 U/mL penicillin/streptomycin at 37 °C in a 5% CO2 atmosphere. All cell lines were tested for mycoplasma contamination.
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Establishing HeLa Cell Lines for Live-Cell Imaging

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HeLa cells were grown in DMEM high-glucose medium (Nacalai Tesque) containing 10% FBS (Gibco) and 1% L-glutamine–penicillin–streptomycin solution (GPS; Sigma-Aldrich) at 37°C in a 5% CO2 atmosphere. For transfection, FuGENE HD (Promega) was used according to the manufacturer’s instructions. Briefly, 2 µg DNA was mixed with 6 µl of FuGENE HD in 100 µl of Opti-MEM (Thermo Fisher Scientific) and incubated at RT for 30 min before being added to HeLa cells grown in 35-mm glass-bottomed dishes (AGC Technology Solutions) to 40–70% confluence. To establish stable cell lines, 1.6 µg PB533- or PB510-based PiggyBac plasmid and 0.4 µg transposase expression vector (System Biosciences) were used, and cells were selected in 1 mg/ml G418 (Nacalai Tesque) for RNAP2 Ser2ph-mintbody and H2B-Halo or 1 µg/ml puromycin (InvivoGen) for mCherry-PCNA. Cells expressing RNAP2 Ser2ph-mintbody at low levels were collected using a cell sorter (SH800; Sony). Before live-cell imaging, the medium was replaced with FluoroBrite (Thermo Fisher Scientific) containing 10% FBS and 1% GPS.
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