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3 protocols using anti cd49d clone l25

1

SARS-CoV-2 Antigen-Specific T Cell Profiling

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Cryopreserved PBMCs were thawed and cultured overnight. Baseline specimens were stained directly in the absence of ex vivo stimulation. For identification of antigen-specific T cells through intracellular cytokine staining, 6×106 cells were stimulated with 0.5 mg/ml anti-CD49d clone L25 (BD Biosciences) and 0.5 mg/ml anti-CD28 clone L293 (BD Biosciences) in the absence or presence of peptides for 4h in RP10 media (RPMI 1640 medium (Corning) supplemented with 10% fetal bovine serum (FBS, VWR), 1% penicillin (GIBCO), and 1% streptomycin (GIBCO)) in the presence of 3 mg/ml Brefeldin A Solution (eBioscience). Peptides used were 1 mM PepMix SARS-CoV-2 Peptide (Spike Glycoprotein) (JPT Peptide Technologies), 1 mM PepMix SARS-CoV-2 Peptide (NCAP) (JPT Peptide Technologies), or 1 mM PepMix SARS-CoV-2 Peptide (MEVTPSGTWL) (custom synthesized by JPT Peptide Technologies).
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2

SARS-CoV-2 Antigen-Specific T Cell Assay

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Cryopreserved PBMCs were thawed and cultured overnight. Baseline specimens were stained directly in the absence of ex vivo stimulation. For identification of Ag-specific T cells through intracellular cytokine staining, 6 × 106 cells were stimulated with 0.5 mg/ml anti-CD49d clone L25 (BD Biosciences) and 0.5 mg/ml anti-CD28 clone L293 (BD Biosciences) in the absence or presence of peptides for 4 h in RP10 media (RPMI 1640 [Corning] supplemented with 10% FBS [VWR International], 1% penicillin [Life Technologies], and 1% streptomycin [Life Technologies]) in the presence of 3 μg/ml brefeldin A solution (eBioscience). The peptides used were 1 mM PepMix SARS-CoV-2 peptide (spike glycoprotein) (JPT Peptide Technologies), 1 mM PepMix SARS-CoV-2 Peptide (NCAP) (JPT Peptide Technologies), or 1 mM PepMix SARS-CoV-2 Peptide (MEVTPSGTWL) (custom synthesized by JPT Peptide Technologies).
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3

Stimulating and Analyzing PBMCs

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PBMCs were seeded in complete medium at 2 x 10 6 cells/mL in 96-well V-bottom plates (Corning) with unconjugated anti-CD28 (clone L293) and anti-CD49d (clone L25) (each at 3 µL/mL; BD Biosciences), brefeldin A (1 µL/mL; Sigma-Aldrich), monensin (0.7 µL/mL; BD Biosciences), anti-CD107a-PE-CF594 (clone H4A3; BD Biosciences), and the relevant viral peptides (each at a final concentration of 0.5 µg/mL). Unstimulated negative controls were included in each assay. Cells were analyzed by flow cytometry after incubation for 6 hours at 37°C.
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