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2 protocols using repotrectinib

1

Cell Line Maintenance and Compound Screening

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NIH3T3 cells were purchased from American Type Culture Collection (ATCC). Ba/F3, WEHI, and BOSC23 cells were kindly provided by Dr. Daniel G. Tenen (Harvard Medical School). Crizotinib, ceritinib, alectinib, brigatinib, lorlatinib, entrectinib, gilteritinib, and repotrectinib were purchased from Selleck. NIH3T3 cells were maintained in Dulbecco’s Modified Eagle Medium (DMEM) supplemented with 10% fetal bovine serum (FBS), 100 units/ml penicillin, and 100 mg/ml streptomycin (P/S). Parental Ba/F3 cells were maintained in RPMI1640 supplemented with 5% WEHI (as a source of IL-3), 10% FBS, and P/S. Ba/F3 cells expressing CLIP1-LTK mutants were maintained in RPMI1640 supplemented with 10% FBS and P/S. All cell lines were routinely tested for mycoplasma infection and negative for mycoplasma infection.
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2

Characterization of metastatic colon cancer cell line KM12SM

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The human colon cancer cell line KM12SM was kindly gifted by Dr. I. J. Fidler (MD Anderson Cancer Center) to our group in 1999. KM12SM cells are a highly metastatic variant of KM12C cells, which present the TPM3NTRK1 gene rearrangement.8, 9 KM12SM cells were maintained and cultured in RPMI‐1640 medium (Thermo Fischer Scientific) with 10% FBS, penicillin (100 units/ml), and streptomycin (50 μg/ml), in a humidified CO2 incubator at 37°C. Ba/F3 transfected with wild‐type TPM3NTRK1 (Ba/F3_WT) and Ba/F3 transfected with TPM3NTRK1 G595R (Ba/F3_G595R) cells were gifted by Dr. R. Katayama (Japanese Foundation for Cancer Research). Ba/F3_WT, Ba/F3_G595R cells were cultured in DMEM containing 10% FBS. The EGFR‐mutant human lung adenocarcinoma cell line PC9 (del E746_A750) was purchased from RIKEN Cell Bank. Cells were regularly screened for mycoplasma using a MycoAlert mycoplasma detection kit (Lonza). Cell‐line authentication was performed by a short tandem repeat analysis in a laboratory at the National Institute of Biomedical Innovation (Osaka, Japan) in May 2015. Entrectinib, repotrectinib, GDC‐0941, trametinib and gefitinib were purchased from Selleck Chemicals.
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