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13 protocols using α sma

1

Visualizing Mammary Gland Vasculature

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Immunofluorescent staining (IF) with CAV1, CD31 (a marker of vascular endothelial cells, Bioss, Beijing, China) and α-SMA (a marker of vascular smooth muscle, Bioss, Beijing, China) antibodies was performed for co-localization analysis of vasculature in mammary glands as previously described (25 (link)). The sections were labeled with different primer antibodies at various dilutions (CAV1, 1: 150, CD31, 1: 250 and α-SMA, 1: 200) and incubated with the appropriate secondary antibody (CY3 for α-SMA, FITC for CAV1, and CY5 for CD31, Bioss, Beijing, China) at a 1:300 dilution after incubation with the primary antibodies. Nuclei were counterstained with a 10 μg/mL DAPI for 5 min. Fluorescent signals and images were captured using Pannoramic DESK slice scanner system (3D HISTECH Co., Budapest, Hungary). All immune-staining assays were performed at least in triplicate.
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2

Characterization of CAFs by Flow Cytometry

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CAFs biomarkers were recognized by a flow cytometer (BD Biosciences, USA). MSCs from various culture conditions were gathered. After resuspended with PBS in a 1.5 mL eppendorf tube, primary antibodies for CAFs specific protein: α-SMA, Vimentin or FSP1 (Mouse Anti-Human, Bioss, China) were added in eppendorf tubes, respectively (1:100). After a 1 hr incubation at room temperature, the supernatant was disposed. Cells were washed with PBS for 3 times. The FITC labeled secondary antibodies (Goat Anti-Mouse, Bioss, China) were added in each eppendorf tube (1:200) and incubated in dark for 1 hr at room temperature. The cells were washed for 3 times with PBS and then analyzed with BD FACS Calibur System (BD Biosciences, USA).
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3

Protein Expression Analysis in LX-2 Cells

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Total protein was isolated from LX‐2 cells using RIPA (Solarbio) and quantified using a BCA Protein Assay Kit (Solarbio). Then equal amounts of protein samples were separated on SDS‐PAGE and transferred to polyvinylidene difluoride membranes. The membranes were blocked with 5% skimmed milk for 60 minutes, and incubated with primary antibodies against CAPRIN1 (1:500; Proteintech), Cyclin D1 (1:1000; Bioss, Beijing, China), Cyclin E1 (1:1000; Proteintech), p‐RbS807 (1:1000; Bioss), TGF‐β2 (1:1000; Bioss), COL1A1 (1:1000; Bioss), α‐SMA (1:1000; Bioss), p‐Smad2ser467 (1:1000; Cell Signaling Technology, Trask Lane Danvers, MA), Smad2 (1:1000; Cell Signaling Technology), p‐Smad3S423/S425 (1:1000; Cell Signaling Technology), Smad3(1:1000; Cell Signaling Technology) and β‐actin (1:1000; Santacruz Biotechnology) at 4°C overnight. Goat anti‐rabbit IgG or goat anti‐mouse secondary antibodies (1:3000; Solarbio) were employed at 37°C for 60 minutes. The bands were visualized using electro‐chemi‐luminescence (ECL) Western Blotting Substrate (Solarbio). The protein expression was standardized to β‐actin and quantified using Gel‐Pro‐Analyzer software (Media Cybernetics, Rockville, MD).
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4

Western Blot Analysis of Cardiac Proteins

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Proteins were isolated from the ventricular homogenate or cells with lysis buffer (Beyotime Institute of Biotechnology, Shanghai, China) containing phenylmethylsulfonyl fluoride (PMSF) (Sigma-Aldrich) and subjected to Western blot, as described previously [24 (link)]. The antibodies used in this study were glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and collagen type III (Col3al) (Proteintech, Rosemont, IL, USA), matrix metalloproteinase 2 (MMP2) and MMP9 (Abcam, Cambridge, MA, USA), α-SMA (Bioss, Beijing, China), cellular communication network factor 2 (CCN2) (Santa Cruz Biotechnology, Santa Cruz, CA, USA), and TNF-α, p-AKT (Ser473), AKT, p-ERK (Thr202/Tyr204), ERK, p-STAT3 (Tyr705), STAT3, and Caspase-3 (Cell Signaling Technology, Danvers, MA, USA).
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5

Protein Expression Analysis in Hepatic Stellate Cells

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Proteins samples were extracted from primary HSCs and LX‐2 cells using RIPA lysis buffer (Beyotime, China). Equal amounts of proteins were separated by 10% SDS‐PAGE and transferred onto PVDF membranes (Millipore, USA). The membranes were blocked with 5% skim milk for 1 hour at room temperature and then incubated with primary antibodies overnight at 4°C. The following antibodies were used for Western blotting: β‐actin (1:500; Bioss, China), Col1α1 (1:500; Bioss), α‐SMA (1:500; Bioss), PLK1 (1:1000; Abcam), Bax (1:800; Abcam), Bcl‐2 (1:800; Abcam), cleaved caspase‐3 (1:1000; Abcam), β‐catenin (1:500, Bioss), c‐Myc (1:500; Bioss) and Cyclin D1 (1:500; Bioss). The membranes were incubated with HRP‐conjugated secondary antibodies (1:10000; ZSGB‐Bio, China) for 60 minutes at room temperature. The protein bands were detected with a chemiluminescent (ECL) system (Bio‐Rad, USA) and analysed using IMAGE J software (National Institutes of Health, USA).
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6

Immunohistochemical Analysis of Fibrosis Markers

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Sections were block with 5% bull serum albumin (BSA) for 20 min and incubated with antibodies against TGF-β1 (1:150 dilution, Bioss, Beijing, China), α-SMA (1:100 dilution, Bioss, Beijing, China), COL-I (1:150 dilution, Bioss, Beijing, China), COL-III (1:120 dilution, Bioss, Beijing, China), at 4°C for 12 h, followed by incubation with goat anti-rabbit immunoglobulin G (ZSGB-BIO, Beijing, China) at 25°C for 2 h, then the sections were counterstained with hematoxylin. The expressions of up-mentioned proteins were observed with a Leica microscope, and images were collected for semi-quantitative analysis achieved by Image-Pro Plus 6.0 professional image acquisition and analysis system (Media Cybernetics, Rockville, MD, United States).
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7

Immunofluorescence Staining of FFPE and Cultured Cells

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For formalin‐fixed paraffin‐embedded tissues, slides were de‐waxed by washing with xylenes, rehydrated and blocked. For cultured cells, cells were seeded in chamber slides (Cat. #: C6807; Sigma Chemical Co.), fixed with 4% formaldehyde, permeabilized in 0.1% Triton‐X100, and blocked. Slides were then incubated with primary antibodies for α‐SMA (Cat. #: bs‐0189R; Bioss, Beijing, China), Vimentin (Cat. #: 5741; Cell Signaling Technology, Danvers, MA, USA), E‐cadherin (E‐cad, Cat. #: 14472; Cell Signaling Technology), or SP‐C (Cat. #: sc‐7706; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), for overnight at 4°C. Slides were then washed and stained with fluorophore‐conjugated secondary antibodies for 1 hr at room temperature. Cover slips were mounted using mounting medium (Cat. #: C9368; Sigma Chemical Co.), allowed to harden overnight at 4°C and then sealed. Images were acquired on Olympus IX70 (Japan) fluorescence microscope.
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8

Dissecting ASIC1a-Mediated Calcium Signaling

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ASIC1a (1:1,000 dilution, Bioss), Collagen-1 (1:1,000 dilution, Proteintech), α-SMA (1:1,000 dilution, Bioss), β-Actin (1:1,000 dilution, Proteintech), CaM (1:1,000 dilution, Affinity), CaMK II (1:1,000 dilution, Affinity), NFAT (1:1,000 dilution, Affinity), MMP-13 (1:1,000 dilution, Bimake.cn), NF-κB (1:1,000 dilution, Bimake.cn), KN93, and colchicine were purchased from MedChemExpress (MCE, United States). Spider-venompeptide (PcTx-1) was purchased from Abcam (Cambridge, United States). High-sugar DMEM culture medium and phosphate buffered saline (PBS) were purchased from HyClone (United States). Horseradish enzyme labeled anti-rabbit IgG and horseradish enzyme labeled anti-mouse IgG were purchased from Bioss (Beijing, China). PVDF membrane was purchased from Millipore (United States). Fluo-3AM calcium fluorescent probe was purchased from beyotime (Shanghai, China).Lipofectamine 2000, TRIzol Reagent, and Opti-MEM were purchased from Invitrogen (Invitrogen, United States). Amiloride was purchased from Sigma-Aldrich (St. Louis, MO, United States). Rapid Gel Preparation Kits were purchased from EpiZyme (EpiZyme, China). Cell cycle detection kit and CCK-8 cell proliferation toxicity assay kit were purchased from BestBio (Beijing, China).
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9

Immunofluorescence Characterization of Induced ADSCs

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After 21 days of induction, the 2D and 3D cultured samples were rinsed with PBS and subjected to immunofluorescence stainings. After fixing with ice-cold methanol for 5 min, the sections were permeabilized with 0.1% Triton-X100 for 5 min, blocked with 1% BSA for 10 min, and then incubated with rabbit polyclonal anti-vWF antibody (1 : 100, Abcam, UK), rabbit polyclonal anti-VEGFR2 antibody (1 : 100, Novus, USA), and rabbit monoclonal anti-CD31 antibody (1 : 100, Novus, USA) for 2 h at 37°C. After 3 washes in PBS, Texas Red goat anti-rabbit IgG (1 : 300, Molecular Probes, USA) was added for 1 h. Complexes were incubated with DAPI for nuclei staining. Noninduced 2D and 3D hADSCs incubated in completed medium (DMEM supplemented with 10% FBS, 100 U/mL penicillin, and 100 g/mL streptomycin) served as the negative controls while HUVEC served as the positive control. Besides, the immunofluorescence staining of α-SMA (1 : 100, Bioss, China) was examined in these 4 groups after 7 days in vitro. All of the samples were examined under optical microscopy.
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10

Western Blot Analysis of Liver Proteins

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Total proteins were extracted from liver tissue and cells using radio-immunoprecipitation buffer (RIPA). 80 μg of sample proteins were separated by in 10 or 12% SDS-PAGE gel, and transferred onto PVDF membranes (Millipore Corporation, Billerica, MA, USA) by electrobloting. The membranes were blocked for 60 min in a buffer containing 0.1% Tween-20 and 5% milk. The membranes were incubated overnight at 4 °C with primary antibodies against α-SMA, Col-1, MMP-2 (Bioss, Beijing, China), Smad7 (Novus Biologicals, Littleton, USA), Wnt1 (Abcam, Cambridge, MA, USA), Wnt5a (Novus Biologicals, Littleton, USA), β-catenin, GSK-3β (ProteinTech Group, Chicago, USA), NFAT5 (Santa Cruz, CA, USA). Immune complexes were detected with horseradish peroxidase (HRP)-conjugated secondary antibodies (ProteinTech Group, Chicago, USA), and then were visualized by ECL method. β-actin (Boster, Wuhan, China) was served as a loading control. Intensity of each protein band of interest was quantified by densitometry using Quantity One 4.6.3 software (Bio Rad).
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