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Aquamount

Manufactured by Polysciences
Sourced in Germany, United Kingdom, United States

AquaMount is a water-based mounting medium designed for use in microscopy. It is a colorless, transparent liquid that helps preserve and protect specimens mounted on microscope slides. AquaMount is formulated to provide a clear, refractive index-matched medium for mounting a variety of biological samples.

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21 protocols using aquamount

1

Immunofluorescent Staining of Kidney Sections

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Freshly cut kidney sections (5 μm, two sections per glass slide) from preserved kidney blocks from mice included in the previous study were air dried for 15 minutes, washed twice with PBS (pH 7.4), blocked with 5% goat serum (Genetex, Irvine, CA) for 30 minutes and incubated with primary antibodies for 1 hour at room temperature. In one set of experiments sheep anti-human/mouse fibrinogen (dilution 1:200) and rat anti-mouse CD41 (dilution 1:100) were used. In another set of experiments, the above anti-fibrinogen antibody plus a rabbit anti-mouse vWF (dilution 1:200) were used. In control experiments, rabbit anti-mouse podocin (dilution 1:1,000) was used. Primary antibodies were prepared in PBS with 5% goat serum. All sections were washed three times for 3 minutes each with PBS/5% goat serum and then incubated with secondary antibodies in PBS/5% goat serum. For secondary antibodies, we used a donkey anti-sheep Alexa 647 (dilution 1:500) for fibrinogen detection; a donkey anti-rat Alexa 488 (dilution 1:2,500) for CD 41 detection; and, a goat anti-rabbit Alexa 488 (1:5,000) for vWF and podocin detection. Sections were washed with PBS/5% goat serum 3 times for 3 minutes each and fixed with Aqua-Mount (Polysciences, Warrington, PA). Control kidney sections lacked primary antibodies.
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2

Mouse Brain Tissue Preparation and Imaging

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Mice were deeply anesthetized with phenobarbital and transcardially perfused with 10 ml ice-cold Dulbecco’s PBS (DPBS) followed by 10 ml ice-cold 4% PFA. Brains were removed and immersed in 4% PFA overnight at 4°C. Brains were then washed with DPBS with 0.1% sodium azide at 4°C prior embedding in 2% agarose and making 40 μm transverse sections using a vibratome (Leica Microsystems, Wetzlar, Germany, VT1200). Tissues were mounted on slides using AquaMount (Polysciences, Warrington, PA, United States). Microscopy and imaging were done using the Neurolucida system (MBF Bioscience, Williston, VT, United States) with a Zeiss Axioskop microscope with computer-driven stage and Zeiss MRc camera.
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3

Immunohistochemistry of GLUT4 in Cryosections

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Cryosections for immunohistochemistry have been prepared as described previously12 (link). Sectioned samples were left 1 h at room temperature to dry, before being fixated in formaldehyde for 5 min. Sections were blocked in PBS (3% BSA) for 30 min, washed and subsequently incubated with GLUT4 (1:1000 in PBS (1% BSA), provided by A. Schürmann, DIfE Potsdam) for 1 h at room temperature. After washing, sections were incubated with a biotinylated secondary antibody (1:200 in PBS; Dianova, Germany) for 30 min, washed and incubated with Streptavidin-Cy3 (1:200 in PBS; Dianova, Germany) for 30 min. Subsequently the sections were washed and incubated with Hoechst (1:1000 in PBS; Thermo Fisher, Germany) for 5 min to stain for nuclear positioning, washed and mounted on slides using Aqua Mount (Polysciences, Germany).
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4

Cortical Neuron Isolation and Culture

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Cortical neurons were prepared from rats at E18 as described (Biederer and Scheiffele, 2007 (link)) with modifications. In brief, dissected cortices were incubated in 0.05% trypsin at 37°C for 20 minutes (Invitrogen, Carlsbad, CA; 25300054) and plated at a density of ~30,000 cells per coverslip. Dissociated cells were plated on poly-l-lysine (Sigma P1274) and incubated in a cell culture incubator with 5.0% CO2. Cytosine arabinoside (Sigma C1768) was added at a final concentration of 2 μM per well 2 days in vitro to prevent glia cell overgrowth. Cells were washed with ice-cold PBS and fixed at DIV 7 and DIV 14 in ice-cold 4% PFA/4% sucrose for 15 minutes, permeabilized with 0.1% Triton X-100 in PBS for 10 minutes at RT and blocked in 5% FBS in PBS for 1 hour at RT. Coverslips were later sequentially incubated for 1 hour at RT in anti-SynCAM 1, anti-Parvalbumin and WFA (see Key Resource Table for more details) and their corresponding secondary antibodies. All antibodies were diluted in PBS and coverslips were washed 3×10 minutes in PBS at RT in between all antibody incubations. Coverslips were mounted with Aqua-Mount (Polysciences Inc., Warrington, PA) and imaged as described below.
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5

Histological Analysis of Mouse Brain

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Approximately 3 weeks following surgery mice were transcardially perfused with Phosphate-Buffered Saline (PBS, pH 7.4), followed by 4% paraformaldehyde in phosphate buffer. Brains were extracted and postfixed overnight at 4°C and subsequently cryoprotected with PBS containing 30% sucrose. Coronal 40 μm thick sections were obtained using a cryostat (Leica, Germany). The sections were slide-mounted, counterstained with 4′,6-diamidino-2-phenylindole (DAPI) for 10 min, and coverslipped with Aquamount (Polysciences Inc., Warrington, PA, USA). The wide-field fluorescent images were captured with a 4× objective on a fluorescent microscope (Olympus, Japan). eYFP and red fluorescent retrobeads signals were captured using an U-MWIBA3 filter cube (Ex460- 495, Em510-550, DM505) and an U-MWIG3 filter cube (Ex530-550, Em575IF, DM570), respectively. Confocal images were captured through a Quorum spinning disk confocal microscope (Zeiss) using a 20× objective lens and were subsequently analyzed with Volocity Software (Perkin Elmer). eYFP and red fluorescent retrobeads signals were excited with 491 and 561 nm laser, respectively. Adobe Photoshop CS6 (Adobe Systems Incorporated, San Jose, CA, USA) was used to adjust the brightness and contrast of representative sections.
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6

Quantifying Neural Progenitor Cells

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Cells were cultured on polyornithine/laminin coated plates at a density of 1 × 104 cells/cm2. Cultured cells were fixed in 4% paraformaldehyde for 10 min at 4°C, washed in PBS, and incubated in PBS+ (PBS containing 5% donkey serum, 3% BSA, 0.3% Triton-X100) for 30 min. Primary antibodies against Ser-10 phosphorylated histone H3 (1:1,000, XX) and nestin (1:200, Millipore) were incubated in PBS+ overnight at 4°C. Cells were washed and incubated with anti-mouse Alexa488 and anti-rabbit Alexa594 antibodies (1:1,000, both from Invitrogen) for 2h at RT. After 3 x PBS (DAPI was included in the second wash), coverslips were mounted using Aquamount (Polysciences). Cells were counted using a Nikon Eclipse E800 fluorescence microscope. The percentage of immunoreactive cells was scored by counting the number of immunoreactive cells in 10 unbiased areas (based on DAPI) in triplicates. Images were taken using a Nikon Eclipse E800 fluorescence microscope.
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7

Whole Mount Immunostaining of Brain Tissue

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For whole mount immunostaining, previously published protocol was followed with minor modifications43 (link). Briefly, ~3 mm wide strips were cut from the periphery of cranial or left lobes. Strips were blocked in PBS with 0.3% Triton X-100 and 5% normal donkey serum and then incubated with primary antibodies diluted in PBS with 0.3% Triton X-100 at 4 °C overnight in an 1.7 ml tube. The next day, the strips were washed with PBS + 1% Triton X-100 + 1% Tween-20 (PBSTT) on a rocker at room temperature for 1 h and this wash was repeated 3 times. Secondary antibodies were diluted in PBS with 0.3% Triton X-100 and added to the strips for an overnight incubation on a rocker at 4 °C. The third day, strips were washed was PBSTT as described and then fixed with 2% PFA in PBS for 3 h. Strips were washed 3 times with PBS and mounted on slides using Aquamount (18606, Polysciences) with the flat side of the strips facing the coverslip. Z-stacks of 20–30 μm thickness at 1 μm step size were taken using Olympus FV1000 confocal microscope and quantified with the Imaris software (version 7.7.2).
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8

Fluorescent Imaging of Mouse Brain

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After behavioural testing, mice were transcardially perfused with phosphate-buffered saline (PBS, pH 7.4), followed by 4% paraformaldehyde in phosphate buffer. Brain tissue was extracted and postfixed overnight at 4 °C. The brains were then cryoprotected using a 30% sucrose in PBS solution. Coronal 40 µm-thick sections were collected using a cryostat (Leica, Germany). The sections were slide-mounted, counterstained with 4′,6-diamidino-2-phenylindole 135 for 5 min and subsequently coverslipped with Aquamount (Polysciences, Inc., Warrington, PA). Wide-field fluorescent images were captured using a 4 × objective lens on a fluorescent microscope (Olympus, Japan). Confocal images were captured using a × 20 and × 60 objective through a Quorum spinning disk confocal microscope (Zeiss, Germany). Adobe Photoshop CS6 (Adobe Systems, Incorporated, San Jose, CA) was used to adjust the brightness and contrast of representative sections.
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9

Quantifying Fibrous Cap Smooth Muscle Cells

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Aortic root paraffin sections were deparaffinized and heat-mediated antigen retrieval was performed using Tris/EDTA (10 mM Tris, 1 mM EDTA, 0.05% Tween, pH 9.0). Sections were blocked for 1 hour at RT with 2% BSA in PBS, followed by incubation with anti-αSMA-Alexa Fluor 647 primary antibody at 4°C. After extensive washing in PBS + 0.1% Tween, sections were counterstained for 5 min with 1μg/mL DAPI (Sigma) and mounted with AquaMount (Polysciences, Inc.). Samples were visualized using a Zeiss AX10 confocal microscope. Fibrous cap smooth muscle cells were counted by positive αSMA staining and normalized to fibrous cap area measured using Zen Black image processing software (Zeiss).
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10

Immunofluorescent Staining of Brain Sections

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Before immunofluorescent staining, 50 μm thick sections were washed in PB and Tris-buffered saline (TBS). This was followed by blocking for 1 hour in 1% human serum albumin (HSA; Sigma-Aldrich) and 0.1% Triton X-100 (and 1 mg/ml Digitonin in case of amyloid beta antibody) dissolved in TBS. After this, the sections were incubated in mixtures of primary antibodies (Table 1) overnight at room temperature. Then sections were washed in TBS and were incubated overnight at 4 °C in a mixture of secondary antibodies (Table 2), all diluted in TBS, followed by washes in TBS and PB. Then sections were mounted on glass slides, and cover-slipped with Aqua-Mount (Polysciences). Immunofluorescence was analyzed using a Nikon Eclipse Ti-E inverted microscope (Nikon Instruments Europe B.V., Amsterdam, The Netherlands) and an A1R laser confocal system. We used 488, 561 and 642 nm lasers (CVI Melles Griot), and scanning was done in line serial mode. Image stacks were obtained with NIS-Elements AR 4.5 software.
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