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12 protocols using 2 4 6 trimethylpyridine

1

Antioxidant Properties of R. oligosporus Fermented Rice

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Methanol, Folin Ciocalteu’s phenol reagent, gallic acid, 2,2-diphenyl-1-picrylhydrazyl (DPPH), and 2,4,6-trimethylpyridine were purchased from Sigma-Aldrich Co. (Saint Louis, MO, USA). R. oligosporus was from the Indonesian Culture Collection, Research Center for Biology, the Indonesian Institute of Science, Cibinong Indonesia. Black CI rice (Bogor, West Java, Indonesia) and IPR30 rice was from the Indonesian Center for Rice Research, Indonesian Agency for Agricultural Research and Development, Ministry of Agriculture, Subang, West Java, Indonesia.
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2

Solid-Phase Peptide Synthesis Workflow

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Nα-Fmoc-protected amino acids,
rink amide resin (0.36 mmol/g), and O-(1H-6-chlorobenzotriazole-1-yl)-1,1,3,3-tetramethyluronium hexafluorophosphate
were purchased from GL Biochem (China). Fmoc-Thr(tBu)-preloaded TentaGel resin (0.18 mmol/g) was purchased from Rapp
Polymere GmbH (Germany). N,N-Dimethylformamide
(DMF), piperidine (PPD), trifluoroacetic acid (TFA), acetonitrile
(MeCN), methanol, dichloromethane (DCM), and diethyl ether (Et2O) were purchased from Merck (Australia). N,N-Diisopropylethylamine (DIEA), trifluoromethanesulfonic
acid (TFMSA), 2,2′-(ethylenedioxy)diethanethiol, triisopropylsilane,
anisole, 2,2′-dipyridyl disulfide, 2,4,6-trimethylpyridine,
1-(2-aminoethyl)maleimide hydrochloride, and palmitic acid N-hydroxysuccinimide were purchased from Sigma-Aldrich (Australia).
All solvents were of analytical grade.
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3

Peptide Synthesis and Fluorescent Labeling

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Unless stated otherwise, all solvents were obtained from commercial sources in at least analytical quality (a.r.) and were used without further purification. Ultrapure water was obtained from a Milli Pore system from Merck. 2-Chlorotrityl chloride resin along with all the Fmoc-l-amino acids were obtained from Iris Biotech. HBTU was purchased from Chempep. DIEA, piperidine, and 2,4,6-trimethylpyridine were obtained from Sigma-Aldrich. An O-ninhydrin test kit was purchased from Anaspec. Sulfo-cyanine5 maleimide (sulfo-Cy5 mal) was purchased from Lumiprobe. The reducing agent tris(2-carboxyethyl)phosphine hydrochloride (TCEP) 0.5 M pH 7 was supplied by Merck Life Science.
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4

Analytical Procedures for Volatile Compounds

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Standard compounds of the highest available purity were used. Pentanal (PEN), hexanal (HEX), 2-pentyl-furan (2PF), 2,4-nonadienal (NON), pyridine (PYR), 1-octen-3-ol (OCT), (E)-2-octenal (OCA) and 2,4,6-trimethylpyridine (TMP) were purchased from Sigma-Aldrich (St. Louis, MO, USA). Water was purified with a Milli-Q purification system A10 Gradient/Elix System (Millipore, Bedford, MA, USA). A standard stock solution of TMP at 0.1 mg L−1 was prepared in Milli-Q water, stored in a sealed vial at 4 °C, and used as internal standard.
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5

Commercial Chicken Seasoning Deterioration

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Commercial chicken seasoning (78 packages, a certain brand with the same ingredients, containing sodium glutamate, salt, sugar, rice flour, chicken, whole egg liquid, flavors, onion, garlic, disodium 5′-ribonucleotide and riboflavin) were purchased from dozens supermarkets in Zhengzhou and Shanghai, and the deterioration was determined by sensory evaluation and divided into different levels of deterioration based on the intensity of rancid flavor, where 30 packs of fresh ones (F), 9 packs of light deteriorated ones (L), 16 packs of medium deteriorated ones (M) and 23 packs of serious deteriorated ones (S). 2,4,6-trimethylpyridine, the mixed standards of 37 kinds of fatty acid methyl esters and C7-C40 saturated alkanes were purchased from Sigma-Aldrich Co. (St. Louis, MO, USA). All the other chemical reagents were of analytical grade.
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6

Comprehensive Analysis of Organic Compounds

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Diethyl ether (anhydrous, 99.7%), sodium chloride (NaCl) and sodium sulfate (granular, anhydrous 99%) were purchased from Sangon Biotech (Shanghai) Co., Ltd. (Shanghai, China). n-Alkane standards (C7-C30) and internal standards: 2-ethylbutanoic acid (acid fraction), 2-methyl-3-heptanone (neutral fraction), 2-nonanol (alcohol fraction) and 2,4,6-trimethylpyridine (basic fraction) were purchased from Sigma-Aldrich Chemicals Co. (St. Louis, MO, USA). Authentic reference compounds listed in (Tables 1–3) were obtained from commercial sources, as follows: nos. 1–4, 8, 10, 12, 14–18, 20–25, 30, 33 (Aladdin, Shanghai, China); no. 5 and 11 (TCI, Shanghai, China); nos. 6, 7, 19, 27, 32, 34, 35, 37, 41 (Sigma-Aldrich, Shanghai, China).
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7

Volatile Compounds in Duck Leg Meat

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Duck leg meat that was purchased from a local market (Xiamen, China) was stored at −20 °C in a refrigerator. Instant Oolong tea powder containing 25.07% (label provision) of tea polyphenols was purchased from Fujian Da Ming Co., Ltd. (Zhangzhou, China). A standard series of C8-C20 alkanes for retention index (RI) determination and the internal standard 2,4,6-trimethylpyridine (≥98%) and ethyl decanoate (≥98%) were purchased from Sigma-Aldrich Co., Ltd. (St. Louis, USA). The standards, including 1-pentanol (≥98%), (Z)-3-hexen-1-ol (≥90%), benzaldehyde (≥97%), furfural (≥95%), (E)-2-hexenal (≥98%), benzeneacetaldehyde (≥98%), (E)-linalool oxide (≥96%), linalool (≥95%), phenylethyl alcohol (≥90%), 1-octen-3-ol (98%), (E)-2-nonenal (≥95%), (E,E)-2,4-heptadienal (≥98%), (E)-2-nonenal (≥98%), safranal (≥90%), decanal ≥(95%), β-cyclocitral (≥95%), 2,4-decadienal (≥90%), (E,E)-2,4-decadienal (≥95%), (E)-dodecanal (≥95%), alpha-terpineol (≥96%), hexanal (≥95%), β-ionone (≥97%), nonanal (≥96%), limonene (≥97%), dihydroactinidiolide (≥95%) and diisobutyl phthalate (≥98%) were purchased from Sigma-Aldrich (St Louis, USA). Anhydrous sodium chloride was purchased from Sinopharm Chemical Reagent Co., Ltd. (Shanghai, China).
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8

Volatile Compounds Analysis in Fish Fillets

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The volatile compounds in fillets were assayed by the method described in our previous study [17 (link)] using the gas chromatography-mass spectrometry (GC-MS, QP2020, Shimadzu, Japan) coupled with automated solid-phase microextraction (SPME) system (AOC-6000, CTC, Zwingen, Switzerland). Volatile compounds were identified by chemical standards (Sigma, Shanghai, China) and linear retention indices (calculated using a series of n-alkanes). The concentrations were quantified by the ratio of the peak area to the internal standard (2, 4, 6-trimethyl-pyridine, Sigma, Shanghai, China). Odor activity value (OAV) was used to evaluate the contribution of each volatile compound. When the OAV was equal to or greater than 1, it was considered that the substance was an odor-active compound contributing to the overall aroma [18 (link)]. The OAV was calculated as: OAV=Ci/OTi
where Ci is the concentration of the volatile compound, OTi is the odor threshold of the compound reported in the literature [17 (link)].
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9

Synthesis and Characterization of Pheromone Compounds

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2-ethyl-3,5(6)-dimethyl pyrazine (EDP, a mixture of the 3,5- and 3,6-dimethyl isomers, herein referred to as pheromone isomers), E-β-Farnesene (EBF), 2,4,6-trimethylpyridine (TMP), and ylang ylang oil were purchased from Sigma-Aldrich (Sigma-Aldrich, St. Louis, MO, USA). The purities of these four chemicals were >95%.
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10

Volatile Compounds Extraction and Characterization

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Anhydrous sodium sulfate, ethanol, and dichloromethane were purchased from Sinopharm Chemical Reagent Co., Ltd (Shanghai, China). 2,4,6-Trimethylpyridine, hexanal, nonanal, (E)-2-nonenal, 1-penten-3-ol, 3-octanone, 2-pentylfuran, 1-butanol, octanal, (E)-2-octenal, 2,3-octanedione, (E,Z)-2,6-nonadienal, (E)-2-pentenal, 1-octen-3-ol, (E,E)-2,4-heptadienal, heptanal, benzaldehyde, lactic acid (85 %), (E,E)-2,4-nonadienal, (E)-2-hexenal, (E)-2-decenal, 2,4-di-tert-butylphenol, (E,E)-2,4-decadienal, acetic acid and n-Alkane mixed standard (C7-C30) of chromatographic grade was purchased from Sigma Aldrich (St. Louis, MO, USA).
This study employed GC–MS model GC-14B (Shimadzu, Kyoto, Japan), SDE device model HB-TSZL (Anhui Great Wall Glass Instrument Factory (Xuancheng, China), and the thermoelectric thermostatic water bath model HWS-24 from the Shanghai Yiheng Scientific Instrument Co., LTD (Shanghai, China).
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