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5 protocols using nrf2 12721

1

Isolation and Identification of PBA from I. pubescens

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PBA was isolated from I. pubescens and identified by Dr. Peng Wu from Guangzhou University of Chinese Medicine. Antibodies against Keap1 (10503-2-AP) was purchased from Proteintech Group, Inc. (Chicago, IL, USA). Glyceraldehyde-3-phosphate dehydrogenase (GAPDH, E12-052), HO-1 (E1A5393), NQO1 (E2A6437), cullin-3 (Cul3, E2A7225V), Flag (E1T508-2) and β-actin (E12-051) antibodies were purchased from Enogene Company (Nanjing, Jiangsu, China). Ubiquitin (Ub, sc-8017), caspase-1 (sc-56036), caspase-1 p20 (sc-398715) and interleukin-1 beta (IL-1β, sc-52012) antibodies were bought from Santa Cruz Biotechnology (Santa Cruz CA, USA). Nrf2 (12721) and lamin B1 (13435) antibodies were purchased from Cell Signaling Technology (Danvers, MA, USA). Nrf2 antibody (ab137550) for immunofluorescence staining was purchased from Abcam (Cambridge, UK). NLPR3 (NBP-2-12446) antibody was purchased from Novus Biologicals, LLC (Centennial, CO, USA). MG-132 (HY-13259) and tBHQ (HY-100489) were purchased from MedChemExpress (Monmouth Junction, NJ, USA).
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2

Nrf2, Tubulin, and Cilia Imaging Assay

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N-acetyl-L-cysteine(NAC), hydrogen peroxide(H2O2), MTT [3(4,5-dimethyl-thiazol-2-yl)-2,5-diphenyl tetrazolium bromide] and 4′,6-diamidno-2-phenylinole(DAPI) were purchased from the Sigma Chemical Co. (St. Louis, MO, USA). 2’,7’–dichlorofluorescin diacetate (DCF-DA) was purchased from Molecular Probe (Eugene, Oregon, USA). Rabbit antibodies which are reactive with Nrf2 (12,721) were from Cell Signaling Technology Inc. (Danvers, MA, USA). Mouse antibodies which are reactive with acetylated tubulin (T7451) or β-tubulin (T4026) were from Sigma-Aldrich Co. (St. Louis, MO, USA). Rabbit antibodies which are reactive with Arl13b (17,711–1-AP) were from Proteintech Group Inc. (Rosemont, IL, USA). Chicken anti-mouse IgG-Alexa 488 (A-21200) and goat anti-rabbit-Alexa 568 (A-11011) were obtained from Invitrogen (Calsbad, CA, USA). Except where indicated, all other materials are obtained from the Sigma Chemical Co. (St. Louis, MO, USA)17 (link).
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3

Western Blot Analysis of Liver Proteins

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Liver tissues were homogenized with a lysis buffer containing RIPA and phosphatase-inhibitors on ice. Protein concentration was quantificated by BCA kit (ThermoFisher Scientific) after centrifuged at 13,000 r/min at 4℃ for 15 min. Thirty microgram proteins were subjected to 10% SDS-PAGE electrophoresis and transferred to polyvinylidene difluoride (PVDF) membrane. Membranes were blocked with 3% BSA for 2 h and then immunoblotted with primary antibodies (Nrf2, 12721; Keap1, 8047; p62, 5114; p-p62, 95697; β-actin, 4970; Cell Signaling Technology, Danvers, MA) diluted with 3% BSA for 2 h at room temperature. The membranes were incubated with secondary antibodies (Anti-rabbit IgG, 7074; Cell Signaling Technology, Danvers, MA), followed by visualized with the Chemiluminescence System. And the gray level of the protein expression was analyzed by using the software, ImageJ.
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4

Ligand OH-Py2N2 Production Protocol

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Ligand OHPy2N2 was produced as the trihydrochloride salt using previously published methods (Johnston et al., 2019 (link)). Dulbecco’s modified Eagle’s medium (DMEM), fetal bovine serum (FBS), gentamicin, penicillin, and 0.05% trypsin were all purchased from Thermo Fisher Scientific (Waltham, MA, United States). Hydrogen peroxide and all chemicals were obtained from Sigma Chemical Co. (St. Louis, MO, United States) unless otherwise stated. Antibodies against Grx1 (ab45953) and Grx2 (ab45953) were purchased from Abcam (Waltham, MA, United States). Nrf2 (#12721) and GPX4 (#52455) antibodies were purchased from Cell Signaling (Denver, CO, United States). CellROX Deep Red was purchased from Thermo Fisher Scientific (Waltham, MA, United States). Colorimetric cell viability kit I (WST-8) was purchased from PromoKine (Heidelberg, Baden-Württemberg, Germany).
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5

Antibody Protocols for Autophagy Regulators

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Antibodies for Egr-1 (4154), LC3A (4599), LC3B (83506), Atg3 (3415), Atg4B (5299), Atg5 (12994), Atg7 (8558), Atg12 (4180), Atg16L1 (8089), and NRF2 (12721) were purchased from Cell Signaling Technology. Antibodies for p62 (AF5312), β-Actin (AF0003) and lamin B1(AF1408) were purchased from Beyotime Biotechnology (Shanghai, China).
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