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26 protocols using tcc 240a

1

Spectrophotometric Assay of GST Activity

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The GST activity was evaluated by monitoring the conjugation of 1-chloro-2,4-dinitrobenzene (CDNB; Sigma Aldrich, St. Louis, MO, USA) with GSH (S-2,4-dinitrophenyl glutathione; Sigma Aldrich, St. Louis, MO, USA) using a spectrophotometer (Shimadzu–TCC 240A) set at 340 nm for 20 seconds. The reaction system was formed of 50 μL of tissue homogenates for colon and liver, 50 mmol/L potassium phosphate buffer pH 7.2, 0.5 mmol/L EDTA, 1 mmol/L CDNB, and 1 mmol/L GSH. The blank was carried out without GSH. One unit of GST was determined as the amount of enzyme required to decompose 1 nmol of conjugate/min [33 (link)].
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2

Microtubule Polymerization Assay

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Turbidity assay was performed as previously described18 (link). Recombinant GST-Dis1 and GST were mixed on ice with 26 µM tubulin in BRB80 buffer (80 mM PIPES, 1 mM MgCl2, 1 mM EGTA, pH 6.8) containing 1 mM GTP. Microtubule polymerisation was induced by a temperature shift to 37 °C, and the absorbance was monitored at 350 nm in 5-s intervals for 40 min using the spectrometer UV1800 (SHIMADZU) equipped with TCC-240A (SHIMADZU).
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3

Kinetic Study of Pyrrolidine-Substrate Reactions

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The kinetic study was performed using a spectrophotometer (UV-1650 Shimadzu) equipped with a Peltier temperature controller (TCC-240 A), which is able to keep constant temperature within 0.1 K. The reactions were carried out under pseudo-first order conditions in which the pyrrolidine concentration (6 × 10−4 to 8 × 10−1 mol L−1) was at least 20 times greater than the substrate concentration (about 3 × 10−5 mol L−1). The first-order rate constants measured, kobsd, values, together with detailed reaction conditions, are summarized in Tables S1–S6 in the ESI. Reproducible kinetics constants were measured from several consistent experimental runs within ±3–5% standard deviation (Table S7 in the ESI).
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4

Spectrophotometric Assay of rt-PA Activity

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The enzymatic activity of rt-PA and t-ELIP were measured using a spectrophotometric method [7 (link), 23 (link)]. Thawed rt-PA or reconstituted t-ELIP were diluted into a solution of 0.5 % BSA and 1 % Triton-X (Sigma-Aldrich, St. Louis, MO, USA) to achieve concentrations of rt-PA between 0.3 and 3 µg/mL in disposable cuvettes used for spectrophotometric measurement. The amount of Triton-X employed in the solution exceeded the critical micelle concentration (0.015 %) (Triton-X Product Information Sheet, Sigma- Aldrich, St. Louis, MO, USA) to ensure rupture of the lipid shell surrounding t-ELIP and release of the associated rt- PA. The solution was aspirated to remove echogenic microbubbles [24 (link)], and diluted into a pre-warmed solution (37 °C) of 0.5 % phosphate buffer solution and a chromogenic substrate (S-2288, Chromogenix, DiaPharma Group, Inc., Westchester, OH, USA). The chromogenic substrate is hydrolyzed by rt-PA and allows spectrophotometrical measurement of the change of absorbance at 405 nm over time, which is proportional to the enzymatic activity of rt-PA. A spectrophotometer (UV-1700, Shimadzu, Japan) with temperature controller (TCC-240A, Shimadzu, Japan) was used to record the absorbance of the solution over the course of 5 min at 37 °C. The rt-PA activity was reported in terms of the change in absorbance over time (ΔAbs/min).
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5

Spectroscopic Characterization of Biobased PLLA

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l-(+)-lactic acid solution 88–92%, toluene and xylenes (mixture of isomers) were purchased from Aldrich-Merck (USA-Germany). Commercial PLLA for 3D printing was used as reference PLLA for ORD and other spectroscopies. It was characterized by a DSC (Differential Scanning Calorimetry) glass transition at +60 °C and by a DSC melting point peak at 157 °C with a melting enthalpy of 45.4 J/g. Green PLLA films were obtained from used plastic water bio-bottle from S. Anna company, Vinadio, Italy.
Spectrophotometric studies were performed on a Shimadzu UV-2450 spectrophotometer (made in Japan) equipped with thermostatted cells through the cell temperature controller TCC-240A. The optical rotatory dispersion (ORD) spectra were recorded on a Jasco P-2000 polarimeter (JASCO, Japan) equipped with a digital monochromator from Optometrics, model DMC1-03 from USA, which transforms the polarimeter into a spectropolarimeter. Infrared spectra were recorded on a Nicolet 6700 FT-IR spectrometer from ThermoFisher Scientific (Waltham, MA, USA) using reflectance mode and ZnSe crystal. The reflectance spectra were then converted into conventional infrared absorption spectra through the Omnic software of the spectrometer. In addition, the integration of the infrared absorption bands was made through the Omnic software of the spectrometer.
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6

Spectrophotometric Measurement of rt-PA Activity

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The enzymatic activity of rt-PA and t-ELIP were measured using a spectrophotometric method [7 (link), 23 (link)]. Thawed rt-PA or reconstituted t-ELIP were diluted into a solution of 0.5 % BSA and 1 % Triton-X (Sigma-Aldrich, St. Louis, MO, USA) to achieve concentrations of rt-PA between 0.3 and 3 μg/mL in disposable cuvettes used for spectrophotometric measurement. The amount of Triton-X employed in the solution exceeded the critical micelle concentration (0.015 %) (Triton-X Product Information Sheet, Sigma-Aldrich, St. Louis, MO, USA) to ensure rupture of the lipid shell surrounding t-ELIP and release of the associated rt-PA. The solution was aspirated to remove echogenic microbubbles [24 (link)], and diluted into a pre-warmed solution (37 °C) of 0.5 % phosphate buffer solution and a chromogenic substrate (S-2288, Chromogenix, DiaPharma Group, Inc., Westchester, OH, USA). The chromogenic substrate is hydrolyzed by rt-PA and allows spectrophotometrical measurement of the change of absorbance at 405 nm over time, which is proportional to the enzymatic activity of rt-PA. A spectrophotometer (UV-1700, Shimadzu, Japan) with temperature controller (TCC-240A, Shimadzu, Japan) was used to record the absorbance of the solution over the course of 5 min at 37 °C. The rt-PA activity was reported in terms of the change in absorbance over time (ΔAbs/min).
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7

Quantifying Carbonyl Levels in Tissues

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Carbonyl levels were measured in the liver and colon by a spectrophotometer (Shimadzu–TCC 240A) set at 376 nm, as previously described by Richert, Wehr [31 (link)]. The results were expressed in nmol carbonyl/mg total protein using an extinction coefficient of 22.000 mM-1cm-1. The total protein concentration of each sample was analyzed as described by Hartree [30 (link)].
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8

Glutathione Peroxidase Activity Assay

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Glutathione peroxidase (GPx, EC 1.11.1.9) activity was evaluated using H2O2 as a substrate in an assay coupled with glutathione reductase-catalyzed oxidation of nicotinamide adenine dinucleotide phosphate (NADPH) at 340 nm (spectrophotometer, Shimadzu—TCC 240A, Kyoto, Japan), using an NADPH extinction coefficient of 6.22 mM-1 cm-1 [25 (link)]. One unit of glutathione peroxidase was defined as the amount of enzyme required to oxidize 1 nmol of nicotinamide adenine dinucleotide phosphate per minute.
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9

Superoxide Dismutase Activity Assay

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In the assay described by [34 (link)], xanthine oxidase produces superoxide from the oxidation of hypoxanthine to xanthine, which in turn reduces cytochrome c. The kinetics of the cytochrome c reduction was monitored by a spectrophotometer (Shimadzu–TCC 240A) set at 550 nm for 1 minute. When the homogenate was added to the system, the inhibition of cytochrome c reduction occurs, as SOD catalyzes the dismutation of superoxide into H2O2 and O2. The reaction system, in the final concentrations, was composed of 50 mmol/L potassium phosphate buffer pH 7.2, 0.5 mmol/L EDTA, 0.01 mmol/L oxidized cytochrome c (Sigma Aldrich, St. Louis, MO, USA), 0.05 mmol/L hypoxanthine, homogenate (amount varied from 5 μL to 80 μL), and enough quantity of xanthine oxidase to generate a cytochrome c reduction rate of 0.025 abs/min. One unit of SOD was determined as the amount of enzyme in the homogenate required to decrease the cytochrome c reduction by 50%. To obtain this data, it was necessary to perform the assay using different volumes of the same homogenate to obtain a logarithmic function from the plot of the amount of SOD and the percentage of the inhibition of cytochrome c reduction.
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10

Enzymatic Activity of MbNHase Variants

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The enzymatic activity of WT MbNHase and each variant was determined using acrylonitrile as the substrate (acrylamide; Δε225 = 2.9 mM−1 cm−1). The rate of nitrile hydration was determined by continuously monitoring the formation of acrylamide at 225 nm using a Shimadzu UV-2450 spectrophotometer equipped with a TCC-240A temperature controlled cell holder [19 (link)]. A typical 1 mL reaction consisted of 50 mM Tris-HCl buffer pH 7.0 at 25 °C and various concentrations of acrylonitrile (0 to 450 mM). One unit (U) of MbNHase activity is defined as the formation of 1 μmol of acrylamide per minute. To obtain the kinetic parameters, Vmax and Km, the initial velocities from at least three independent measurements were fitted to the Michaelis-Menten equation using OriginPro 9.0 (OriginLab, Northampton, MA). Kinetic data for each MbNHase variant was determined more than three times for multiple purifications, all of which provided consistent results.
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