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3 protocols using sca 1 percp cy5

1

Isolation and Characterization of Hematopoietic Stem and Progenitor Cells

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Bone marrow was harvested from the femurs, tibias, and pelvic bones of mice by crushing. c-Kit+ cells were enriched using anti-c-Kit microbeads (Cat #130-091-224, Miltenyi Biotech, San Diego, CA) followed by magnetic separation (autoMACS Pro Separator; Miltenyi Biotech). Previously enriched c-Kit+ cells were incubated with a cocktail of biotin-conjugated monoclonal antibodies against CD5, CD11b, B220, 7-4, Gr-1, and Ter-119 (Cat. No. 130-090-858, Miltenyi Biotech). Enriched c-Kit+ cells were stained with antibodies to define HSPC populations as follows42 (link): HSC [Streptavidin-BV605 (Biolegend), Sca-1-PerCP-Cy5.5 (E13-161.7) (Biolegend), c-Kit-APC-780 (2B8) (Thermo Fisher Scientific, Waltham, MA), CD48-APC (HM48-1) (Biolegend), CD150-PE-Cy7 (TC15-12F12.2) (Biolegend)]; MPPs/CLPs [Streptavidin-BV605, Sca-1-PerCP-Cy5.5, c-Kit-APC-780, CD135-APC (A2510) (Biolegend), CD127-PECy7 (A7R34) (Tonbo Biosciences)]; CMPs/GMPs/MEPs (Streptavidin-BV605, Sca-1-PerCP-Cy5.5, c-Kit-APC-780, CD32/16-PECy7 (93) (Biolegend), CD34-A647(RAM34) (BD Biosciences)]. Dilutions used and catalogue identifiers for each antibody are provided in Supplementary Table 2. 4’,6-diamidino-2-phenylindole (DAPI) was used to exclude dead cells. Cells were analyzed on a FACSAria III (BD Biosciences, San Diego, CA) and FlowJo20 version 9.4.11 (Tree Star, Ashland, OR) was used to analyse related data.
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2

Isolation of Epidermal Progenitors

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Isolation of epidermal progenitors from control, Eed cKO, Ring1a/b 2KO, and Eed; Ring1a/b 3KO mice was done as previously described (Cohen et al. 2019 (link)). P0 back skins were collected and incubated for 4–6 h in 1.26 U/mL dispase (Invitrogen) at 4°C. The epidermis was gently peeled from the underlying dermis, followed by 0.25% trypsin treatment for 15 min at 37°C. The cell suspension was washed twice with 1× PBS; stained with 1:200 Sca1-PerCP-Cy5.5 (Biolegend), 1:100 α6-integrin-FITC (eBiosciences), and 1:200 EpCAM-APC (Biolegend) for 30 min on ice; and washed twice with 1× HBSS before cell sorting. Interfollicular epidermis, enriched for epidermal progenitors, was sorted as EpCAM(+), Sca1(+), and α6-integrin(high). For ChIP and ChIP-seq analyses, cell suspensions were stained for cell viability and cross-linked before staining and FACS sorting as described above. All cell isolations were performed on a FACS Influx instrument (BD) in the Flow Cytometry Core Facility at Icahn School of Medicine at Mount Sinai.
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3

Naja mossambica mossambica Cardiotoxin Extraction

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Cardiotoxin (CTX) from Naja mossambica mossambica was purchased from Sigma Aldrich (St. Louis, MO, USA). For immunohistochemical staining, Pax7, bromodeoxyuridine (BrdU) and myosin heavy chain (MF20) antibodies were purchased from the Developmental Studies Hybridoma Bank (Iowa City, IA). Ly6b.2 (clone 7/4) and CD11b were purchased from AbD Serotec (Raleigh, NC). For fluorescence-activated cell sorting (FACS), propidium iodide (PI), CD31-APC, CD45-APC, Sca1-PerCP-Cy5.5, Biotinylated-Vcam1; PE/Cy7-streptavidin, Ly6G/C-PE-Cy7, F4/80-Alexa Fluor 488, and CD206-PE were purchased from BioLegend (San Diego, CA). Calcein Blue Viability Dye was purchased from eBioscience (San Diego, CA).
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