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6 protocols using baculogold linearized baculovirus dna

1

Baculovirus Protein Expression System

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DNA sequences coding for Pgm, Ku70a and Ku80c were obtained by gene synthesis (DNA 2.0 or Eurofins MWG/Operon). The synthetic PGM DNA sequence was first cloned into the pMAL-c2x vector (New England Biolabs). The MBP-PGM fusion, the MBP, the KU70a and the KU80c sequences were further introduced into the pVL-1392 vector (BD Biosciences). A HA tag was added to the C-terminus of Ku70a and the N-terminus of Ku80c. All plasmid sequences are provided in a supplementary information file (Text S1). Plasmids pVL1392-MBP-PGM, pVL1392-MBP, pVL1392-KU70a-HA and pVL1392-HA-KU80c were transfected individually into High Five cells together with the BD BaculoGold Linearized Baculovirus DNA (BD Biosciences).
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2

Generation of Recombinant SFTSV Nucleocapsid Protein

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The recombinant baculovirus, Ac-His-SFTSV-N expressing a histidine (His)-tagged SFTSV recombinant N (rN) protein at C-terminal, was generated as described previously [23 (link),35 (link),36 (link)]. Briefly, the cDNA encoding the N protein of SFTSV strain HB29 (nucleotide position 43–780 of segment S, GenBank accession No. NC_018137) was artificially synthesized (GeneScript, Piscataway, NJ) and then was ligated into the BamHI sites upstream of the 8-His tag coding sequence of the transfer vector pAcYM1 [37 (link)]. Tn5 cells were transfected with mixtures of the transfer vector pAcYM1-SFTSV-N and BD BaculoGold Linearized Baculovirus DNA (BD Biosciences, San Jose, CA) according to the manufacturer’s instructions with the procedures described by Kitts et al. [38 (link)] but with modification by Matsuura et al. [37 (link)]. A baculovirus (Ac-ΔP), which lacks polyhedrin expression, was used as a negative control virus.
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3

Recombinant MERS-CoV and SARS-CoV RBDs Production

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To verify the specificity of MAbs, the RBDs of the MERS-CoV and SARS-CoV S proteins were prepared using a baculovirus expression system, as described previously (Fukuma et al., 2015 (link)). Briefly, the nucleotide sequences encoding amino acids 358–588 of the S protein of MERS-CoV and amino acids 318–510 of the S protein of SARS-CoV were tagged at the C-terminus with histidine-tags and cloned into the pAcYM1 transfer vector. Insect Sf9 cells were transfected with mixtures of the transfer vector and BD BaculoGold Linearized Baculovirus DNA (BD Biosciences, San Jose, CA) according to the manufacturer’s instructions, thus producing MERS-CoV RBD-expressing baculovirus (AcMERS-RBD-His) and SARS-CoV RBD-expressing baculovirus (AcSARS-RBD-His). Insect Tn5 cells were then infected with AcMERS-RBD-His or AcSARS-RBD-His, thus producing MERS-CoV RBD and SARS-CoV RBD, respectively. Three days post infection, the RBD proteins were purified from the culture supernatants by using by Ni2+-nitrilotriacetic acid affinity chromatography (Qiagen, Hilden, Germany) according to the manufacturer’s instructions. These RBD proteins were used in conventional ELISAs. Briefly, 96-well ELISA plates (Thermo Fisher Scientific) were coated with 125 ng of the purified RBD proteins and an IgG-ELISA was performed as described previously (Iwata-Yoshikawa et al., 2016 (link)).
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4

Recombinant Baculovirus Expression System for MBP-Pgm and HA-PgmL

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For MBP-Pgm or MBP expression, plasmids pVL1392-MBP-PGM and pVL1392-MBP (Marmignon et al., 2014 (link)) were transfected individually into High Five cells together with the BD BaculoGold Linearized Baculovirus DNA (BD Biosciences) to produce recombinant baculoviruses (Dubois et al., 2017 (link)).
Synthetic PGML genes adapted to the universal genetic code (Eurofins Genomics, Supplementary file 5) were cloned into the pFastBAC vector (ThermoFisher Scientific) and fused at their 5’ end to a nucleotide sequence encoding the HA tag. Production of recombinant baculoviruses and expression of HA-PgmL fusions were performed using the BAC-to-BAC baculovirus expression system (ThermoFisher Scientific).
To co-express each HA-PgmL fusion with MBP-Pgm (or the MBP control), High Five cells were co-infected with the appropriate recombinant baculoviruses. Cell lysis, preparation of soluble protein extracts, co-precipitation on amylose beads and detection of HA-tagged PgmLs on western blots using HA-7 monoclonal α-HA antibodies (Sigma Aldrich) were performed as described (Dubois et al., 2017 (link)). Independent experiments showed that the HA epitope does not interact non-specifically with MBP-PGM.
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5

H5 Hemagglutinin Protein Expression in Insect Cells

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SF9 insect cells were grown in SF-900 II serum free media (Life Technologies). The cells were co-transfected with a pAcGP67 plasmid containing a H5 HA (A/Vietnam/1203/04 (H5N1), BEI Resources) expression construct and BD BaculoGold linearized baculovirus DNA (BD Biosciences). The H5 HA protein construct has an altered C-terminus, where the transmembrane and cytosolic regions of the protein were removed and replaced with an artificial trimerization domain (the foldon from T4 fibritin), and a His-tag as previously described (Stevens et al. 2006 (link)). Cell handling, transfection and protein expression were performed as recommended by the BD BaculoGold starter package kit (BD Biosciences). Viral titers were monitored using the BacPAK qPCR Titration Kit (Clontech Laboratories). For expression, fresh SF9 cells at 80% confluency were infected with H5 HA containing baculovirus solution at MOI between 3 and 6. 4 days later the suspension was collected and the cells were removed by centrifugation. H5 HA is secreted into the insect cell media and purified by Ni-affinity chromatography. The protein concentrate was then subjected to Sephacryl S300 gel filtration column with phosphate buffer (50 mM sodium phosphate/pH 8.1 and 50 mM NaCl) as a running buffer. Protein fractions were pooled and concentrated and the final yield was ~4 mg of H5 HA per liter of insect cell culture.
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6

Production and Purification of Recombinant H5 HA Protein

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SF9 insect cells were grown in SF-900 II serum free media (Life Technologies). The cells were co-transfected with a pAcGP67 plasmid containing a H5 HA (A/Vietnam/1203/04 (H5N1), BEI Resources) expression construct and BD BaculoGold linearized baculovirus DNA (BD Biosciences). The H5 HA protein construct has an altered C-terminus, where the transmembrane and cytosolic regions of the protein were removed and replaced with an artificial trimerization domain (the foldon from T4 fibritin), and a His-tag as previously described (Stevens et al. 2006 (link)). Cell handling, transfection and protein expression were performed as recommended by the BD BaculoGold starter package kit (BD Biosciences). Viral titers were monitored using the BacPAK™ qPCR Titration Kit (Clontech Laboratories). For expression, fresh SF9 cells at 80 % confluency were infected with H5 HA containing baculovirus solution at MOI between 3 and 6. 4 days later the suspension was collected and the cells were removed by centrifugation. H5 HA is secreted into the insect cell media and purified by Ni-affinity chromatography. The protein concentrate was then subjected to Sephacryl S300 gel filtration column with phosphate buffer (50 mM sodium phosphate/pH 8.1 and 50 mM NaCl) as a running buffer. Protein fractions were pooled and concentrated and the final yield was ~4 mg of H5 HA per liter of insect cell culture.
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