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5 protocols using bca reagent

1

Western Blot Analysis of Tight Junction Proteins

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The western blotting was performed as Linshi reported methods and modification. RIPA Lysis Buffer (Beyotime Biotechnology, Shanghai, China) and extraction kits (ThermoFisher Scientific, Shanghai, China) were used to isolate the total proteins, a nuclear protein, and cytoplasmic proteins, respectively. The protein concentration was analyzed using a BCA reagent (CWBIO, Beijing, China) followed by SDS-PAGE and electrotransfer of separated protein lysates to nitrocellulose membranes (Millipore). After 1 h of blocking, the membranes were incubated with a primary antibody at 4°C for overnight, then incubated with the secondary antibody for 2 h at room temperature. Positive bands were measured by enhanced chemo-luminescence (Tanon, Shanghai, China). Gel-Pro Analyzer software version 4.0 (Media Cybernetics, Silver Spring, MD, USA) was used to analyse the densitometry. Antibodies against ZO-1 (ab96587), occludin (ab167161), claudin-1 (ab129119), and claudin-4 (ab15104) were obtained from Abcam (Cambridge, MA, USA). The antibody against ERK (4695S), P-ERK (4370S), and β-actin (4970S) were secured from CST (CST, MA, USA).
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2

Protein Expression Analysis in Pancreatic Cancer

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Proteins were extracted from pancreatic adenocarcinoma cells using RIPA lysis buffer (CWBIO, Beijing, China) containing phosphatase inhibitors and protease inhibitors. The protein concentration was determined using BCA reagent (CWBIO). Protein samples were separated by 8%‒10% SDS-PAGE, and then transferred to a polyvinylidene fluoride (PVDF) membrane (Millipore, Billerica, USA). Then, PVDF membrane was blocked in 5% skim milk and incubated with mouse anti-NQO1 (1:1000; Abcam, Cambridge, USA), rabbit anti-E-cadherin (1:1000; Abcam), rabbit anti-Vimentin (1:1000; Abcam), rabbit anti-Snail (1:1000; Abcam), rabbit anti-CPT1A (1:1000; Abcam), rabbit anti-LCAD (1:1000; Proteintech, Chicago, USA), rabbit anti-MCAD (1:1000; Proteintech), or mouse anti-actin (1:3000; Santa Cruz Biotech, Santa Cruz, USA) primary antibody in a refrigerator at 4°C overnight, followed by incubation with corresponding HRP-conjugated anti-rabbit or anti-mouse IgG secondary antibodies (Beyotime, Shanghai, China) at room temperature for 1-2 h. Finally, an enhanced chemiluminescence (ECL) kit (CWBIO) was used for the visualization of the blots.
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3

Autophagic Protein Expression Analysis

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Proteins were extracted from the brain samples using a Proteins Extraction Kit (CWBIO, China) and quantified with BCA-Reagents (CWBIO, China). Proteins were separated by SDS–PAGE at 160 V on a 12% gel (CWBIO, China) for 1 h and then transferred to a 0.22 μm nitrocellulose filter membrane at 200 mA for 3 h. The membranes were incubated with autophagy related primary antibodies diluted as follows: anti-CST3 antibody (ab24327; Abcam, UK), anti-mTOR antibody (ab32028; Abcam, UK), anti-mTOR (phospho S2448) antibody (ab109268; Abcam, UK), anti-LC3 antibody (ab192890; Abcam, UK), anti-Beclin-1 antibody (3495, CST, USA) diluted 1:1,000, and anti-GAPDH antibody (ab181602; Abcam, UK) diluted 1:2,000. Membranes were then incubated with secondary antibodies diluted at 1:5,000. The membranes were washed and bands were visualized with enhanced chemiluminescence immunoblotting detection reagents (Thermo Fisher Scientific, USA). For autophagic protein, bafilomycin A1 was used at a final concentration of 200 nM and added during the last 3 h. Images were gotten by Image Lab Software (BIO-RAD, USA), and semiquantitative analysis was performed by normalizing the protein bands to the internal control GAPDH.
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Western Blot Analysis of CoW Proteins

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After qPCR analysis, the 4 possible CoW variation-related proteins were analyzed by Western blotting. Proteins were extracted from the samples using Proteins Extraction Kit (CWBIO, China) and quantified with BCA-Reagents (CWBIO, China). Protein lysates were subjected to sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) at 160 V on 12% gel (CWBIO, China) for 1 h and then transferred to a 0.22 μm nitrocellulose filter membrane (NC) at 200 mA for 3 h. The primary antibodies CST3 and PFN2 (Santa, USA) were diluted 1:100, GNAS and GPx4 (abcam, UK) were diluted 1:2500, and the secondary antibodies were diluted 1:5000. The membranes were washed completely and visualized with enhanced chemiluminescence (ECL) immunoblotting detection reagents (Thermo Fisher Scientific, USA). Semi-quantitative results were normalized to the housekeeping gene GAPDH after gray scanning.
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5

Protein Extraction and Western Blot Analysis

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Proteins were extracted from the samples using Proteins Extraction Kit (CWBIO, China) and quantified with BCA‐Reagents (CWBIO, China). Proteins were separated by SDS‐PAGE at 160 V on 12% gel (CWBIO, China) for 1 hour and then transferred to a 0.22‐μm nitrocellulose filter membrane) at 200 mA for 3 hours. The primary antibodies were diluted as follows: CST3 (Santa, sc‐16989, USA) was diluted 1:100, p53 (Abcam, ab131442, UK), CAPN10 ([Calpain 10] Abcam, ab28226, UK) and GAPDH (Abcam, ab181602, UK) were diluted 1:1000. Secondary antibodies were diluted 1:5000. The membranes were washed completely and visualized with enhanced chemiluminescence immunoblotting detection reagents (Thermo Fisher Scientific, USA). Semiquantitative results were normalized to the housekeeping gene GAPDH after gray scanning.
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