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Synergy 2 biotek microplate reader

Manufactured by Agilent Technologies
Sourced in United States

The Synergy 2 BioTek Microplate Reader is a versatile instrument designed for a wide range of microplate-based assays. It features a monochromator-based optical system that enables flexible wavelength selection for absorbance, fluorescence, and luminescence detection.

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26 protocols using synergy 2 biotek microplate reader

1

Alamar Blue Assay for Cell Viability

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Cell viability assays was performed using alamarBlue assay, as previously described25 (link) according to the manufacturer’s recommendations (Thermo Fisher Scientific). For dose–response growth curve, cells were cultured in 96-well plates in 300 μl of the medium in the presence of 0.3, 3, and 30 μM. XAV-939 compared to DMSO vehicle-treated control cells. On day 1, 2, and 3, 30 μl/well of alamarBlue substrate was added (10%) and plates were incubated for 1 h in the dark at 37 °C. Readings were obtained using BioTek Synergy II microplate reader (BioTek Inc., Winooski, VT, USA) at fluorescent mode (Ex 530 nm/Em 590 nm). For cell viability, cells were cultured in 96-well plates in 300 μl of the medium. On day10, 30 μl/well of alamarBlue substrate was added (10%) and plates were incubated for 1 h in the dark at 37 °C. Readings were obtained using BioTek Synergy II microplate reader (BioTek Inc., Winooski, VT, USA) at fluorescent mode (Ex 530 nm/Em 590 nm).
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2

GKN1 Promoter Activity Regulation

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Gastrokine-1 (GKN1)-Luc reporter plasmids, wherein −479/+16 bp, −185/+16 bp, or −113/+16 bp GKN1 promoter fragments drive luciferase gene expression, were generated by cloning the corresponding PCR-amplified promoter fragments in pGL3-Basic (Promega). Expression vectors pCI, pCI-KLF4, pCI-KLF5, and pCI-OCT1 were from Open Biosystems (Huntsville, AL, USA). Human skin NCTC-2544 epithelial cells36 (link) were grown in Dulbecco's modified Eagle's medium (DMEM) supplemented with 10% fetal bovine serum in humidified air with 5% CO2 at 37°C. NCTC cells in midlog phase of growth were cotransfected with 1.83 μg plasmids (0.6 μg GKN1-Luc reporter + 0.4 μg pCI-KLF4, pCI-KLF5, and/or pCI-OCT1, along with 0–1.2 μg pCI as filler to keep the total amount of plasmid used constant, and 30 ng pRL-SV40 plasmid for normalizing the transfection efficiency) using 6 μL FuGENE-6 (Roche Molecular Biochemicals, Indianapolis, IN, USA). After 2 days of transfection, the cells were washed with cold PBS, lysed with 500 μL passive lysis buffer (Promega), and 100 μg lysate was analyzed using a dual luciferase assay kit (Promega and Biotek Synergy-II microplate reader (Biotek, Winooski, VT, USA), integrating the measurement over 10 seconds with a delay of 2 seconds.
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3

Alamar Blue Cell Viability Assay

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Cell viability was measured using Alamar blue assay according to the manufacturer's recommendations (AbD Serotec, Raleigh, NC, USA). In brief, to cultured cells in 96-well plates 10 μl of Alamar blue substrate was added and the plates were incubated in the dark at 37 °C for 1 h. Reading was subsequently taken using fluorescent mode (Ex 530 nm/Em 590 nm) using BioTek Synergy II microplate reader (BioTek Inc., Winooski, VT, USA).
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4

Sensitive ELISA for BoNT/A Quantification

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Black Nunc Maxisorp plates (Nalgene Nunc International, Rochester, NY, USA) were coated overnight with 5 μg/mL 4LCA (Figure 1A–D) or rabbit anti-BoNT/A HC50 antiserum in phosphate buffer saline (PBS) followed by three washes in PBS containing 0.05% Tween 20 (PBST). The plates were blocked with 2% non-fat milk in PBST for 1 h at 37 °C, followed by three PBST washes, and then serial dilutions of RI-BoNT/A in plasma (50 μL each), incubated for 1 h at 37 °C, followed by a 3× PBST wash. Either PBS or 5 μg/mL of the biotinylated mAb (6A or 3B3), diluted in PBS, were added to the samples, incubated for 1 h at 37 °C, and washed 3× in PBST. Streptavidin-poly-horseradish peroxidase conjugate (Thermo Fisher Scientific, Waltham, MA, USA) was added (1:2000), incubated for 1 h at 37 °C, and washed 3× with PBST. Super Signal ELISA Femto Substrate (Thermo Fisher Scientific, Waltham, MA, USA) was used for detection and relative luminescence values were measured using Biotek Synergy II Microplate reader (BioTek Instruments, Winooski, VT, USA). Excel was used to process the data. MAbs were biotinylated using the EZ-Link™ Hydrazide-Biotin kit (Thermo Fisher Scientific, Waltham, MA, USA) according to the manufacturer’s instructions. Protein concentration was measured using the NanoDrop 1000 (Thermo Fisher Scientific, Waltham, MA, USA).
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5

Luciferase Assay for Transcriptional Regulation

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Luciferase reporter assay was performed as previously described 20 (link), 21 (link), 23 (link), 24 (link). The ARE-luciferase reporter plasmids were transfected into the indicated RTECs using Lipofectamine 3000 reagent (Invitrogen). Each of transfection was included the same amount of pRL-TK Renilla plasmid, which was employed to standardize transfection efficiency. At 48 h after transfection, the luciferase activities in cell lysates were determined with the luciferase assay system (Promega) using a BioTek Synergy2 Microplate reader (Bio-Tek) at wavelengths of 560 and 465 nm according to the manufacturer's guidelines.
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6

Cytotoxicity Evaluation of TMZ and BTZ

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For the cytotoxicity evaluation,
1000 cells/well of U251 or T98G
lines were seeded in 96-well plates and left to adhere for 24 h. After,
the cells were treated for 72 h with 100 μL of free TMZ (10
nM to 2.0 × 106 nM), free BTZ (1.0 × 10–4 to 2.0 × 103 nM), or free TMZ+BTZ. A constant TMZ:BTZ
ratio (1:0.8) was used for the combined therapy, with concentrations
ranging between 1.0 × 10–5 and 5.0 × 102 for TMZ, 8.0 × 10–6 and 4.0 ×
102 nM for BTZ. The studied TMZ:BTZ ratio was chosen based
on both drugs’ EE (%) in the developed NPs. Untreated cells
were used as the negative control. After treatment, the cells were
fixed with trichloroacetic acid (TCA) 10% (w/v) at 4 °C for 1
h, then washed with ultrapure water and dried at room temperature.
Then, cells were stained with SRB for 20 min. The samples were washed
twice with 1% (v/v) acetic acid and air-dried to remove the unbound
dye. The protein-bound dye was solubilized by a Tris buffer solution.
The cell protein quantification was measured by UV–vis absorbance
(BioTek Synergy 2 microplate reader, BioTek, U.K.) at 560 nm. Cell
survival inhibition as a function of drug concentration was then plotted
using GraphPad 9.3.1 software (GraphPad Software Inc., USA).
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7

Liver Homogenization and Protein Quantification

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Portions of liver (0.1g wet weight) were homogenized in 0.5mL PBS (pH 7.4) using a motor-driven pestle (Tekmar Co, Cincinnati, OH) at 2000 rpm for 5 min. The protein content of the liver homogenate and aliquots of serum or individual lipoprotein fractions (LDL, HDL, VLDL) isolated as described below were measured by Bradford micro-assay (Cat # 500–0001, Bradford Laboratories, Hercules, CA) using Costar 96-well assay plates (Corning, Corning, NY) and Bio Tek Synergy 2 micro-plate reader (Bio Tek Instruments, Winooski, VT).
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8

Glutathione Quantification Protocol

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Glutathione levels were measured using a glutathione assay kit (Cayman Chemical) according to the manufacturer's instructions. Briefly, cells were re-suspended in MES buffer (0.4 M 2-ethanesulphonic acid, 0.1 M phosphate, 2 mM EDTA, pH 6.0) and lysed by sonification. After centrifugation at 10,000g for 15 min, 1.25 M metaphosphoric acid was added to the supernatant for precipitation of proteins, followed by centrifugation at 15,000g for 10 min. The supernatant was transferred into a 96-well plate and incubated with the assay cocktail containing MES-buffer, co-factor and enzyme mixture, and Ellman's reagent for 30 min. Absorbance was measured at 405 nm with a BioTek Synergy 2 microplate reader (BioTek).
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9

Fetal Placenta and Liver RNA Isolation

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Total cellular RNA was isolated from 50 dGA fetal placenta and liver, as well as from 135 dGA fetal placenta (Baker et al. 2016 ) using the RNeasy Mini Kit (Qiagen, Hilden, Germany) according to the manufacturer’s protocol. The BioTek Synergy 2 Microplate Reader (BioTek, Winooski, VT) was used to quantify RNA concentration, and measure RNA purity using the 260/280 absorbance ratio. Samples were stored at −80°C until use.
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10

Cytokine and Chemokine Quantification

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IFN-γ, IL-10, and IL-2 were measured using ELISA antibody pairs as described (19 (link)). TNF, CCL5, and CXCL10 production were measured using DuoSet ELISA Kits (R&D Systems) per manufacturer instructions. NO2 production was measured by the Griess assay as described (18 (link)). Plates were read on a BioTek Synergy2 microplate reader (BioTek) and analyzed using Gen5 v.1.10 software (BioTek).
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